git: 0ec8be4158ca - main - biology/biostar-tools: Add mafft, clustal-omega, pywgsim deps

Jason W. Bacon jwb at FreeBSD.org
Mon Sep 6 14:29:16 UTC 2021


The branch main has been updated by jwb:

URL: https://cgit.FreeBSD.org/ports/commit/?id=0ec8be4158cacaa92d45914082789d936e8e678b

commit 0ec8be4158cacaa92d45914082789d936e8e678b
Author:     Jason W. Bacon <jwb at FreeBSD.org>
AuthorDate: 2021-09-06 14:27:20 +0000
Commit:     Jason W. Bacon <jwb at FreeBSD.org>
CommitDate: 2021-09-06 14:27:20 +0000

    biology/biostar-tools: Add mafft, clustal-omega, pywgsim deps
    
    Short-read alignment related tools
---
 biology/biostar-tools/Makefile | 7 +++++--
 biology/biostar-tools/distinfo | 2 +-
 2 files changed, 6 insertions(+), 3 deletions(-)

diff --git a/biology/biostar-tools/Makefile b/biology/biostar-tools/Makefile
index 2fbb5fbb05e0..d7c8d53149cb 100644
--- a/biology/biostar-tools/Makefile
+++ b/biology/biostar-tools/Makefile
@@ -1,5 +1,5 @@
 PORTNAME=	biostar-tools
-PORTVERSION=	1.4.0
+PORTVERSION=	1.5.0
 CATEGORIES=	biology python
 
 MAINTAINER=	jwb at FreeBSD.org
@@ -55,7 +55,10 @@ RUN_DEPENDS=	wget>0:ftp/wget \
 		${PYTHON_PKGNAMEPREFIX}multiqc>0:biology/py-multiqc@${PY_FLAVOR} \
 		flash>0:biology/flash \
 		bfc:biology/bfc \
-		Jellyfish>0:biology/jellyfish
+		Jellyfish>0:biology/jellyfish \
+		mafft>0:biology/mafft \
+		clustal-omega>0:biology/clustal-omega \
+		${PYTHON_PKGNAMEPREFIX}pywgsim>0:biology/py-pywgsim@${PY_FLAVOR}
 
 USES=		metaport python
 
diff --git a/biology/biostar-tools/distinfo b/biology/biostar-tools/distinfo
index 631b88b12747..1573e13c2ab6 100644
--- a/biology/biostar-tools/distinfo
+++ b/biology/biostar-tools/distinfo
@@ -1 +1 @@
-TIMESTAMP = 1629823534
+TIMESTAMP = 1630938398


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