git: d1a76744daed - main - science/[, py-]spglib: Update 1.16.1 -> 1.16.2

[Yuri Victorovich]

The branch main has been updated by yuri:

URL: https://cgit.FreeBSD.org/ports/commit/?id=d1a76744daede62373f274cb9eb6e120b6b6be1a

commit d1a76744daede62373f274cb9eb6e120b6b6be1a
Author:     Yuri Victorovich <yuri at FreeBSD.org>
AuthorDate: 2021-08-16 01:29:35 +0000
Commit:     Yuri Victorovich <yuri at FreeBSD.org>
CommitDate: 2021-08-16 01:32:15 +0000

    science/[,py-]spglib: Update 1.16.1 -> 1.16.2
    
    Reported by:    portscout
---
 science/avogadrolibs/Makefile |  2 +-
 science/octopus/Makefile      |  1 +
 science/py-spglib/Makefile    |  7 +++++--
 science/py-spglib/distinfo    |  6 +++---
 science/spglib/Makefile       |  8 ++------
 science/spglib/distinfo       |  6 +++---
 science/spglib/pkg-plist      | 29 +++++------------------------
 7 files changed, 20 insertions(+), 39 deletions(-)

diff --git a/science/avogadrolibs/Makefile b/science/avogadrolibs/Makefile
index ae6e0f72c715..ab11a29913cc 100644
--- a/science/avogadrolibs/Makefile
+++ b/science/avogadrolibs/Makefile
@@ -1,6 +1,6 @@
 PORTNAME=	avogadrolibs
 DISTVERSION=	1.94.0
-PORTREVISION=	1
+PORTREVISION=	2
 CATEGORIES=	science
 
 PATCH_SITES=	https://github.com/${GH_ACCOUNT}/${PORTNAME}/commit/
diff --git a/science/octopus/Makefile b/science/octopus/Makefile
index 0794fc60f1b3..08ab6559cba2 100644
--- a/science/octopus/Makefile
+++ b/science/octopus/Makefile
@@ -1,5 +1,6 @@
 PORTNAME=	octopus
 DISTVERSION=	10.5
+PORTREVISION=	1
 CATEGORIES=	science
 MASTER_SITES=	https://octopus-code.org/download/${DISTVERSION}/
 
diff --git a/science/py-spglib/Makefile b/science/py-spglib/Makefile
index 7b2520575af3..014d3ef15b0a 100644
--- a/science/py-spglib/Makefile
+++ b/science/py-spglib/Makefile
@@ -1,7 +1,7 @@
 PORTNAME=	spglib
-DISTVERSION=	1.16.1
+DISTVERSIONPREFIX=	v
+DISTVERSION=	1.16.2
 CATEGORIES=	science python
-MASTER_SITES=	CHEESESHOP
 PKGNAMEPREFIX=	${PYTHON_PKGNAMEPREFIX}
 
 MAINTAINER=	yuri at FreeBSD.org
@@ -14,6 +14,9 @@ RUN_DEPENDS=	${PYNUMPY}
 
 USES=		python:3.6+
 USE_PYTHON=	distutils autoplist
+USE_GITHUB=	yes
+
+WRKSRC_SUBDIR=	python
 
 post-install:
 	@${STRIP_CMD} ${STAGEDIR}${PYTHONPREFIX_SITELIBDIR}/spglib/_spglib*.so
diff --git a/science/py-spglib/distinfo b/science/py-spglib/distinfo
index 7833f46dd2fe..35ad197a5111 100644
--- a/science/py-spglib/distinfo
+++ b/science/py-spglib/distinfo
@@ -1,3 +1,3 @@
-TIMESTAMP = 1612153493
-SHA256 (spglib-1.16.1.tar.gz) = 9fd2fefbd83993b135877a69c498d8ddcf20a9980562b65b800cfb4cdadad003
-SIZE (spglib-1.16.1.tar.gz) = 723682
+TIMESTAMP = 1629072842
+SHA256 (spglib-spglib-v1.16.2_GH0.tar.gz) = 5723789bee7371ebba91d78c729d2a608f198fad5e1c95eebe18fda9f2914ec8
+SIZE (spglib-spglib-v1.16.2_GH0.tar.gz) = 2004359
diff --git a/science/spglib/Makefile b/science/spglib/Makefile
index 60033460ae73..59179d8c0b18 100644
--- a/science/spglib/Makefile
+++ b/science/spglib/Makefile
@@ -1,6 +1,6 @@
 PORTNAME=	spglib
 DISTVERSIONPREFIX=	v
-DISTVERSION=	1.16.1
+DISTVERSION=	1.16.2
 CATEGORIES=	science
 
 MAINTAINER=	yuri at FreeBSD.org
@@ -9,12 +9,8 @@ COMMENT=	C library for finding and handling crystal symmetries
 LICENSE=	BSD3CLAUSE
 LICENSE_FILE=	${WRKSRC}/COPYING
 
-USES=		autoreconf libtool # cmake is also available now, but the header path change breaks dependencies
+USES=		cmake
 USE_GITHUB=	yes
-GNU_CONFIGURE=	yes
-CONFIGURE_ARGS=	--disable-static
 USE_LDCONFIG=	yes
 
-INSTALL_TARGET=	install-strip
-
 .include <bsd.port.mk>
diff --git a/science/spglib/distinfo b/science/spglib/distinfo
index dbbb162b7545..27bbb659a31f 100644
--- a/science/spglib/distinfo
+++ b/science/spglib/distinfo
@@ -1,3 +1,3 @@
-TIMESTAMP = 1613278193
-SHA256 (spglib-spglib-v1.16.1_GH0.tar.gz) = e90682239e4ef63b492fa4e44f7dbcde2e2fe2e688579d96b01f2730dfdf5b2e
-SIZE (spglib-spglib-v1.16.1_GH0.tar.gz) = 2001539
+TIMESTAMP = 1629072525
+SHA256 (spglib-spglib-v1.16.2_GH0.tar.gz) = 5723789bee7371ebba91d78c729d2a608f198fad5e1c95eebe18fda9f2914ec8
+SIZE (spglib-spglib-v1.16.2_GH0.tar.gz) = 2004359
diff --git a/science/spglib/pkg-plist b/science/spglib/pkg-plist
index 3167c7bf1971..cfd176eb60e8 100644
--- a/science/spglib/pkg-plist
+++ b/science/spglib/pkg-plist
@@ -1,25 +1,6 @@
-include/spglib/arithmetic.h
-include/spglib/cell.h
-include/spglib/debug.h
-include/spglib/delaunay.h
-include/spglib/determination.h
-include/spglib/hall_symbol.h
-include/spglib/kgrid.h
-include/spglib/kpoint.h
-include/spglib/mathfunc.h
-include/spglib/niggli.h
-include/spglib/overlap.h
-include/spglib/pointgroup.h
-include/spglib/primitive.h
-include/spglib/refinement.h
-include/spglib/site_symmetry.h
-include/spglib/sitesym_database.h
-include/spglib/spacegroup.h
-include/spglib/spg_database.h
-include/spglib/spglib.h
-include/spglib/spin.h
-include/spglib/symmetry.h
-include/spglib/version.h
+include/spglib.h
+include/spglib_f08.f90
+lib/libsymspg.a
 lib/libsymspg.so
-lib/libsymspg.so.0
-lib/libsymspg.so.0.0.0
+lib/libsymspg.so.1
+lib/libsymspg.so.1.16.2