[Bug 292215] biology/sra-tools: does not build with jdk21

From: <bugzilla-noreply_at_freebsd.org>
Date: Tue, 06 Jan 2026 12:52:37 UTC
https://bugs.freebsd.org/bugzilla/show_bug.cgi?id=292215

            Bug ID: 292215
           Summary: biology/sra-tools: does not build with jdk21
           Product: Ports & Packages
           Version: Latest
          Hardware: Any
                OS: Any
            Status: New
          Severity: Affects Only Me
          Priority: ---
         Component: Individual Port(s)
          Assignee: jwb@freebsd.org
          Reporter: ronald@FreeBSD.org
          Assignee: jwb@freebsd.org
             Flags: maintainer-feedback?(jwb@freebsd.org)

Although the Makefile says JAVA_VERSION=17+ I get an error when I compile with
DEFAULT_VERSIONS+=java=21.

It looks like a pkg error which is also mentioned in the Makefile for the
JAVA_VERSION line.

[00:04:40] =======================<phase: package       
>============================
[00:04:40] ===== env: 'PKG_NOTES=port_checkout_unclean'
'PKG_NOTE_port_checkout_unclean=no' NO_DEPENDS=yes USER=frits UID=65532
GID=65532
[00:04:40] ===>  Testing for sra-tools-3.3.0
[00:04:40] ===>  Building packages for sra-tools-3.3.0
[00:04:40] ===>   Building sra-tools-3.3.0
[00:04:42] pkg-static: Unable to access file
/wrkdirs/usr/ports/biology/sra-tools/work/stage/usr/local/share/javadoc/ngs-doc/jquery-ui.overrides.css:No
such file or directory
[00:04:42] *** Error code 1

Would you mind if I mark this port as JAVA_VERSION=17 instead of 17+? Or do you
have another solution for this?

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