[Bug 269125] /devel/py39-jupyterlab-3.5.0 requires newer version of importlib_metadata>=4.8.3

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From: <bugzilla-noreply_at_freebsd.org>
Date: Mon, 23 Jan 2023 22:52:05 UTC
https://bugs.freebsd.org/bugzilla/show_bug.cgi?id=269125

            Bug ID: 269125
           Summary: /devel/py39-jupyterlab-3.5.0 requires newer version of
                    importlib_metadata>=4.8.3
           Product: Ports & Packages
           Version: Latest
          Hardware: Any
                OS: Any
            Status: New
          Severity: Affects Some People
          Priority: ---
         Component: Individual Port(s)
          Assignee: ports-bugs@FreeBSD.org
          Reporter: slam@slameagles.com

Hi, when starting /devel/py39-jupyterlab-3.5.0 on FreeBSD 13.1-RELEASE-p5, I
get the following errors. All packages are binary installs via pkg. I
reproduced the error on my usual system and a fresh install. The result is
jupyter-lab opens but see no kernels. jupyter-notebook works and does see the
kernels.Thanks.

[E 2023-01-23 14:26:02.059 ServerApp] Uncaught exception GET
/api/kernelspecs?1674512760906 (127.0.0.1)
    HTTPServerRequest(protocol='http', host='localhost:8888', method='GET',
uri='/api/kernelspecs?1674512760906', version='HTTP/1.1',
remote_ip='127.0.0.1')
    Traceback (most recent call last):
      File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py",
line 581, in _build_master
        ws.require(__requires__)
      File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py",
line 909, in require
        needed = self.resolve(parse_requirements(requirements))
      File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py",
line 800, in resolve
        raise VersionConflict(dist, req).with_context(dependent_req)
    pkg_resources.ContextualVersionConflict: (importlib-metadata 4.8.1
(/usr/local/lib/python3.9/site-packages),
Requirement.parse('importlib_metadata>=4.8.3'), {'jupyterlab-server'})

    During handling of the above exception, another exception occurred:

    Traceback (most recent call last):
      File "/usr/local/lib/python3.9/site-packages/tornado/web.py", line 1713,
in _execute
        result = await result
      File
"/usr/local/lib/python3.9/site-packages/jupyter_server/services/kernelspecs/handlers.py",
line 64, in get
        kspecs = await ensure_async(ksm.get_all_specs())
      File
"/usr/local/lib/python3.9/site-packages/jupyter_client/kernelspec.py", line
311, in get_all_specs
        d = self.find_kernel_specs()
      File
"/usr/local/lib/python3.9/site-packages/jupyter_client/kernelspec.py", line
225, in find_kernel_specs
        from ipykernel.kernelspec import RESOURCES  # type: ignore
      File "/usr/local/lib/python3.9/site-packages/ipykernel/kernelspec.py",
line 18, in <module>
        from .debugger import _is_debugpy_available
      File "/usr/local/lib/python3.9/site-packages/ipykernel/debugger.py", line
39, in <module>
        raise e
      File "/usr/local/lib/python3.9/site-packages/ipykernel/debugger.py", line
22, in <module>
        from debugpy.server import api  # noqa
      File "/usr/local/lib/python3.9/site-packages/debugpy/server/__init__.py",
line 7, in <module>
        import debugpy._vendored.force_pydevd  # noqa
      File
"/usr/local/lib/python3.9/site-packages/debugpy/_vendored/force_pydevd.py",
line 36, in <module>
        preimport('pydevd', [
      File
"/usr/local/lib/python3.9/site-packages/debugpy/_vendored/__init__.py", line
126, in preimport
        import_module(name)
      File "/usr/local/lib/python3.9/importlib/__init__.py", line 127, in
import_module
        return _bootstrap._gcd_import(name[level:], package, level)
      File
"/usr/local/lib/python3.9/site-packages/debugpy/_vendored/pydevd/pydevd_plugins/__init__.py",
line 5, in <module>
        __import__('pkg_resources').declare_namespace(__name__)
      File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py",
line 3260, in <module>
        def _initialize_master_working_set():
      File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py",
line 3234, in _call_aside
        f(*args, **kwargs)
      File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py",
line 3272, in _initialize_master_working_set
        working_set = WorkingSet._build_master()
      File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py",
line 583, in _build_master
        return cls._build_from_requirements(__requires__)
      File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py",
line 596, in _build_from_requirements
        dists = ws.resolve(reqs, Environment())
      File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py",
line 795, in resolve
        raise DistributionNotFound(req, requirers)
    pkg_resources.DistributionNotFound: The 'importlib_metadata>=4.8.3'
distribution was not found and is required by jupyterlab-server
[W 2023-01-23 14:26:02.068 ServerApp] wrote error: 'Unhandled error'
[E 2023-01-23 14:26:02.070 ServerApp] {
      "Host": "localhost:8888",
      "Accept": "*/*",
      "Referer": "http://localhost:8888/lab",
      "User-Agent": "Mozilla/5.0 (X11; FreeBSD amd64; rv:109.0) Gecko/20100101
Firefox/109.0"
    }
[E 2023-01-23 14:26:02.070 ServerApp] 500 GET /api/kernelspecs?1674512760906
(127.0.0.1) 1019.88ms referer=http://localhost:8888/lab
[E 2023-01-23 14:26:02.698 ServerApp] Uncaught exception GET
/api/kernelspecs?1674512762087 (127.0.0.1)
    HTTPServerRequest(protocol='http', host='localhost:8888', method='GET',
uri='/api/kernelspecs?1674512762087', version='HTTP/1.1',
remote_ip='127.0.0.1')
    Traceback (most recent call last):
      File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py",
line 581, in _build_master
        ws.require(__requires__)
      File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py",
line 909, in require
        needed = self.resolve(parse_requirements(requirements))
      File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py",
line 800, in resolve
        raise VersionConflict(dist, req).with_context(dependent_req)
    pkg_resources.ContextualVersionConflict: (importlib-metadata 4.8.1
(/usr/local/lib/python3.9/site-packages),
Requirement.parse('importlib_metadata>=4.8.3'), {'jupyterlab-server'})

    During handling of the above exception, another exception occurred:

    Traceback (most recent call last):
      File "/usr/local/lib/python3.9/site-packages/tornado/web.py", line 1713,
in _execute
        result = await result
      File
"/usr/local/lib/python3.9/site-packages/jupyter_server/services/kernelspecs/handlers.py",
line 64, in get
        kspecs = await ensure_async(ksm.get_all_specs())
      File
"/usr/local/lib/python3.9/site-packages/jupyter_client/kernelspec.py", line
311, in get_all_specs
        d = self.find_kernel_specs()
      File
"/usr/local/lib/python3.9/site-packages/jupyter_client/kernelspec.py", line
225, in find_kernel_specs
        from ipykernel.kernelspec import RESOURCES  # type: ignore
      File "/usr/local/lib/python3.9/site-packages/ipykernel/kernelspec.py",
line 18, in <module>
        from .debugger import _is_debugpy_available
      File "/usr/local/lib/python3.9/site-packages/ipykernel/debugger.py", line
39, in <module>
        raise e
      File "/usr/local/lib/python3.9/site-packages/ipykernel/debugger.py", line
22, in <module>
        from debugpy.server import api  # noqa
      File "/usr/local/lib/python3.9/site-packages/debugpy/server/__init__.py",
line 7, in <module>
        import debugpy._vendored.force_pydevd  # noqa
      File
"/usr/local/lib/python3.9/site-packages/debugpy/_vendored/force_pydevd.py",
line 36, in <module>
        preimport('pydevd', [
      File
"/usr/local/lib/python3.9/site-packages/debugpy/_vendored/__init__.py", line
126, in preimport
        import_module(name)
      File "/usr/local/lib/python3.9/importlib/__init__.py", line 127, in
import_module
        return _bootstrap._gcd_import(name[level:], package, level)
      File
"/usr/local/lib/python3.9/site-packages/debugpy/_vendored/pydevd/pydevd_plugins/__init__.py",
line 5, in <module>
        __import__('pkg_resources').declare_namespace(__name__)
      File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py",
line 3260, in <module>
        def _initialize_master_working_set():
      File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py",
line 3234, in _call_aside
        f(*args, **kwargs)
      File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py",
line 3272, in _initialize_master_working_set
        working_set = WorkingSet._build_master()
      File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py",
line 583, in _build_master
        return cls._build_from_requirements(__requires__)
      File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py",
line 596, in _build_from_requirements
        dists = ws.resolve(reqs, Environment())
      File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py",
line 795, in resolve
        raise DistributionNotFound(req, requirers)
    pkg_resources.DistributionNotFound: The 'importlib_metadata>=4.8.3'
distribution was not found and is required by jupyterlab-server
[W 2023-01-23 14:26:02.699 ServerApp] wrote error: 'Unhandled error'
[E 2023-01-23 14:26:02.700 ServerApp] {
      "Host": "localhost:8888",
      "Accept": "*/*",
      "Referer": "http://localhost:8888/lab",
      "User-Agent": "Mozilla/5.0 (X11; FreeBSD amd64; rv:109.0) Gecko/20100101
Firefox/109.0"
    }
[E 2023-01-23 14:26:02.700 ServerApp] 500 GET /api/kernelspecs?1674512762087
(127.0.0.1) 522.16ms referer=http://localhost:8888/lab
[W 2023-01-23 14:26:03.713 LabApp] Could not determine jupyterlab build status
without nodejs
[E 2023-01-23 14:26:45.131 ServerApp] Uncaught exception GET
/api/kernelspecs?1674512804584 (127.0.0.1)
    HTTPServerRequest(protocol='http', host='localhost:8888', method='GET',
uri='/api/kernelspecs?1674512804584', version='HTTP/1.1',
remote_ip='127.0.0.1')
    Traceback (most recent call last):
      File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py",
line 581, in _build_master
        ws.require(__requires__)
      File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py",
line 909, in require
        needed = self.resolve(parse_requirements(requirements))
      File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py",
line 800, in resolve
        raise VersionConflict(dist, req).with_context(dependent_req)
    pkg_resources.ContextualVersionConflict: (importlib-metadata 4.8.1
(/usr/local/lib/python3.9/site-packages),
Requirement.parse('importlib_metadata>=4.8.3'), {'jupyterlab-server'})

    During handling of the above exception, another exception occurred:

    Traceback (most recent call last):
      File "/usr/local/lib/python3.9/site-packages/tornado/web.py", line 1713,
in _execute
        result = await result
      File
"/usr/local/lib/python3.9/site-packages/jupyter_server/services/kernelspecs/handlers.py",
line 64, in get
        kspecs = await ensure_async(ksm.get_all_specs())
      File
"/usr/local/lib/python3.9/site-packages/jupyter_client/kernelspec.py", line
311, in get_all_specs
        d = self.find_kernel_specs()
      File
"/usr/local/lib/python3.9/site-packages/jupyter_client/kernelspec.py", line
225, in find_kernel_specs
        from ipykernel.kernelspec import RESOURCES  # type: ignore
      File "/usr/local/lib/python3.9/site-packages/ipykernel/kernelspec.py",
line 18, in <module>
        from .debugger import _is_debugpy_available
      File "/usr/local/lib/python3.9/site-packages/ipykernel/debugger.py", line
39, in <module>
        raise e
      File "/usr/local/lib/python3.9/site-packages/ipykernel/debugger.py", line
22, in <module>
        from debugpy.server import api  # noqa
      File "/usr/local/lib/python3.9/site-packages/debugpy/server/__init__.py",
line 7, in <module>
        import debugpy._vendored.force_pydevd  # noqa
      File
"/usr/local/lib/python3.9/site-packages/debugpy/_vendored/force_pydevd.py",
line 36, in <module>
        preimport('pydevd', [
      File
"/usr/local/lib/python3.9/site-packages/debugpy/_vendored/__init__.py", line
126, in preimport
        import_module(name)
      File "/usr/local/lib/python3.9/importlib/__init__.py", line 127, in
import_module
        return _bootstrap._gcd_import(name[level:], package, level)
      File
"/usr/local/lib/python3.9/site-packages/debugpy/_vendored/pydevd/pydevd_plugins/__init__.py",
line 5, in <module>
        __import__('pkg_resources').declare_namespace(__name__)
      File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py",
line 3260, in <module>
        def _initialize_master_working_set():
      File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py",
line 3234, in _call_aside
        f(*args, **kwargs)
      File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py",
line 3272, in _initialize_master_working_set
        working_set = WorkingSet._build_master()
      File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py",
line 583, in _build_master
        return cls._build_from_requirements(__requires__)
      File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py",
line 596, in _build_from_requirements
        dists = ws.resolve(reqs, Environment())
      File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py",
line 795, in resolve
        raise DistributionNotFound(req, requirers)
    pkg_resources.DistributionNotFound: The 'importlib_metadata>=4.8.3'
distribution was not found and is required by jupyterlab-server
[W 2023-01-23 14:26:45.133 ServerApp] wrote error: 'Unhandled error'
[E 2023-01-23 14:26:45.134 ServerApp] {
      "Host": "localhost:8888",
      "Accept": "*/*",
      "Referer": "http://localhost:8888/lab",
      "User-Agent": "Mozilla/5.0 (X11; FreeBSD amd64; rv:109.0) Gecko/20100101
Firefox/109.0"
    }
[E 2023-01-23 14:26:45.134 ServerApp] 500 GET /api/kernelspecs?1674512804584
(127.0.0.1) 532.23ms referer=http://localhost:8888/lab
[E 2023-01-23 14:27:55.413 ServerApp] Uncaught exception GET
/api/kernelspecs?1674512874908 (127.0.0.1)
    HTTPServerRequest(protocol='http', host='localhost:8888', method='GET',
uri='/api/kernelspecs?1674512874908', version='HTTP/1.1',
remote_ip='127.0.0.1')
    Traceback (most recent call last):
      File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py",
line 581, in _build_master
        ws.require(__requires__)
      File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py",
line 909, in require
        needed = self.resolve(parse_requirements(requirements))
      File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py",
line 800, in resolve
        raise VersionConflict(dist, req).with_context(dependent_req)
    pkg_resources.ContextualVersionConflict: (importlib-metadata 4.8.1
(/usr/local/lib/python3.9/site-packages),
Requirement.parse('importlib_metadata>=4.8.3'), {'jupyterlab-server'})

    During handling of the above exception, another exception occurred:

    Traceback (most recent call last):
      File "/usr/local/lib/python3.9/site-packages/tornado/web.py", line 1713,
in _execute
        result = await result
      File
"/usr/local/lib/python3.9/site-packages/jupyter_server/services/kernelspecs/handlers.py",
line 64, in get
        kspecs = await ensure_async(ksm.get_all_specs())
      File
"/usr/local/lib/python3.9/site-packages/jupyter_client/kernelspec.py", line
311, in get_all_specs
        d = self.find_kernel_specs()
      File
"/usr/local/lib/python3.9/site-packages/jupyter_client/kernelspec.py", line
225, in find_kernel_specs
        from ipykernel.kernelspec import RESOURCES  # type: ignore
      File "/usr/local/lib/python3.9/site-packages/ipykernel/kernelspec.py",
line 18, in <module>
        from .debugger import _is_debugpy_available
      File "/usr/local/lib/python3.9/site-packages/ipykernel/debugger.py", line
39, in <module>
        raise e
      File "/usr/local/lib/python3.9/site-packages/ipykernel/debugger.py", line
22, in <module>
        from debugpy.server import api  # noqa
      File "/usr/local/lib/python3.9/site-packages/debugpy/server/__init__.py",
line 7, in <module>
        import debugpy._vendored.force_pydevd  # noqa
      File
"/usr/local/lib/python3.9/site-packages/debugpy/_vendored/force_pydevd.py",
line 36, in <module>
        preimport('pydevd', [
      File
"/usr/local/lib/python3.9/site-packages/debugpy/_vendored/__init__.py", line
126, in preimport
        import_module(name)
      File "/usr/local/lib/python3.9/importlib/__init__.py", line 127, in
import_module
        return _bootstrap._gcd_import(name[level:], package, level)
      File
"/usr/local/lib/python3.9/site-packages/debugpy/_vendored/pydevd/pydevd_plugins/__init__.py",
line 5, in <module>
        __import__('pkg_resources').declare_namespace(__name__)
      File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py",
line 3260, in <module>
        def _initialize_master_working_set():
      File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py",
line 3234, in _call_aside
        f(*args, **kwargs)
      File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py",
line 3272, in _initialize_master_working_set
        working_set = WorkingSet._build_master()
      File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py",
line 583, in _build_master
        return cls._build_from_requirements(__requires__)
      File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py",
line 596, in _build_from_requirements
        dists = ws.resolve(reqs, Environment())
      File "/usr/local/lib/python3.9/site-packages/pkg_resources/__init__.py",
line 795, in resolve
        raise DistributionNotFound(req, requirers)
    pkg_resources.DistributionNotFound: The 'importlib_metadata>=4.8.3'
distribution was not found and is required by jupyterlab-server
[W 2023-01-23 14:27:56.042 ServerApp] wrote error: 'Unhandled error'
[E 2023-01-23 14:27:56.043 ServerApp] {
      "Host": "localhost:8888",
      "Accept": "*/*",
      "Referer": "http://localhost:8888/lab",
      "User-Agent": "Mozilla/5.0 (X11; FreeBSD amd64; rv:109.0) Gecko/20100101
Firefox/109.0"
    }
[E 2023-01-23 14:27:56.043 ServerApp] 500 GET /api/kernelspecs?1674512874908
(127.0.0.1) 1119.38ms referer=http://localhost:8888/lab

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