From nobody Wed Nov 09 13:13:46 2022 X-Original-To: ports-bugs@mlmmj.nyi.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2610:1c1:1:606c::19:1]) by mlmmj.nyi.freebsd.org (Postfix) with ESMTP id 4N6llt3wDPz4V033 for ; Wed, 9 Nov 2022 13:13:46 +0000 (UTC) (envelope-from bugzilla-noreply@freebsd.org) Received: from mxrelay.nyi.freebsd.org (mxrelay.nyi.freebsd.org [IPv6:2610:1c1:1:606c::19:3]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (4096 bits) server-digest SHA256 client-signature RSA-PSS (4096 bits) client-digest SHA256) (Client CN "mxrelay.nyi.freebsd.org", Issuer "R3" (verified OK)) by mx1.freebsd.org (Postfix) with ESMTPS id 4N6llt2Bmkz44HS for ; Wed, 9 Nov 2022 13:13:46 +0000 (UTC) (envelope-from bugzilla-noreply@freebsd.org) ARC-Message-Signature: i=1; a=rsa-sha256; c=relaxed/relaxed; d=freebsd.org; s=dkim; t=1667999626; h=from:from:reply-to:subject:subject:date:date:message-id:message-id: to:to:cc:mime-version:mime-version:content-type:content-type: content-transfer-encoding:content-transfer-encoding; bh=k7hAF5/4KJZefJVGorVBpEa8ftrYObY/oGvomBdSqeU=; b=DyKea+0P/nJuSRX1hGRc4GxsUr9x5joCjL94yvW1JNhk79fn5Vuj7xAPVv2Y1KFIMgzHSo lzdA/v99tq6A2dntNBIGlT/IBppxtcdb5mkvyYANl1F9dm+mykgffiOCnueTVOuvJIMEQZ 92xuJGWZiR/+HF78uZTG3IA1edCgSdiMgjazOW5I0gMjVE8iYiFKB8CdM6I+QI8DAPjliz 8t/4wx6/a59/2n8SGJhT2fW73pnZ9JVRwjrK2D5pDL1suJdxGbC9cUyQ2hrl622746c7pc g/Dl2tSakRQJTk34oQ0qjaj4PAJRdWwBtWKPIeZEmTClZIaNhVVaSUOmcHCRHg== ARC-Seal: i=1; s=dkim; d=freebsd.org; t=1667999626; a=rsa-sha256; cv=none; b=FpL/togO7bmEK84tBjZ861TuiicRkt8Dulbs6UBrcBxgq5ztoWLQWcTSVJuvNxMgV2CCC/ VKMcj51LNeFdxA3of65vkAIqDdWhQIPpb4ZulaAy6mb+/J5czcGoloeUtzvvn2YfDCqJbi oK034ZFXR/Liqkiog2b9VEgBNcRcoXOcvkSCmHyzUCq6KbvWNLuvCGuGsAnVjdJPeHiYNl rWw2Szi/0VOSp1rmssNDIckU5hBCwVRZXfx/ILnIjekZWGHcYA3Cv4S1JeADEF2UXo9mRf LeyJN3lpN/ChUyrKMBXfMieCxdH1PTTRva4qcBmkWh4oMfDcWShhnMoKeOmdjA== ARC-Authentication-Results: i=1; mx1.freebsd.org; none Received: from kenobi.freebsd.org (kenobi.freebsd.org [IPv6:2610:1c1:1:606c::50:1d]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (4096 bits) server-digest SHA256) (Client did not present a certificate) by mxrelay.nyi.freebsd.org (Postfix) with ESMTPS id 4N6llt1DX4zMvB for ; Wed, 9 Nov 2022 13:13:46 +0000 (UTC) (envelope-from bugzilla-noreply@freebsd.org) Received: from kenobi.freebsd.org ([127.0.1.5]) by kenobi.freebsd.org (8.15.2/8.15.2) with ESMTP id 2A9DDkLU003320 for ; Wed, 9 Nov 2022 13:13:46 GMT (envelope-from bugzilla-noreply@freebsd.org) Received: (from www@localhost) by kenobi.freebsd.org (8.15.2/8.15.2/Submit) id 2A9DDkSs003319 for ports-bugs@FreeBSD.org; Wed, 9 Nov 2022 13:13:46 GMT (envelope-from bugzilla-noreply@freebsd.org) X-Authentication-Warning: kenobi.freebsd.org: www set sender to bugzilla-noreply@freebsd.org using -f From: bugzilla-noreply@freebsd.org To: ports-bugs@FreeBSD.org Subject: [Bug 267668] databases/mongo60: 6.0.2 Segmentation fault Date: Wed, 09 Nov 2022 13:13:46 +0000 X-Bugzilla-Reason: AssignedTo X-Bugzilla-Type: new X-Bugzilla-Watch-Reason: None X-Bugzilla-Product: Ports & Packages X-Bugzilla-Component: Individual Port(s) X-Bugzilla-Version: Latest X-Bugzilla-Keywords: X-Bugzilla-Severity: Affects Only Me X-Bugzilla-Who: jason.d.jenkins@gmail.com X-Bugzilla-Status: New X-Bugzilla-Resolution: X-Bugzilla-Priority: --- X-Bugzilla-Assigned-To: ports-bugs@FreeBSD.org X-Bugzilla-Flags: X-Bugzilla-Changed-Fields: bug_id short_desc product version rep_platform op_sys bug_status bug_severity priority component assigned_to reporter Message-ID: Content-Type: text/plain; charset="UTF-8" Content-Transfer-Encoding: quoted-printable X-Bugzilla-URL: https://bugs.freebsd.org/bugzilla/ Auto-Submitted: auto-generated List-Id: Ports bug reports List-Archive: https://lists.freebsd.org/archives/freebsd-ports-bugs List-Help: List-Post: List-Subscribe: List-Unsubscribe: Sender: owner-freebsd-ports-bugs@freebsd.org X-BeenThere: freebsd-ports-bugs@freebsd.org MIME-Version: 1.0 X-ThisMailContainsUnwantedMimeParts: N https://bugs.freebsd.org/bugzilla/show_bug.cgi?id=3D267668 Bug ID: 267668 Summary: databases/mongo60: 6.0.2 Segmentation fault Product: Ports & Packages Version: Latest Hardware: Any OS: Any Status: New Severity: Affects Only Me Priority: --- Component: Individual Port(s) Assignee: ports-bugs@FreeBSD.org Reporter: jason.d.jenkins@gmail.com A couple of points: After a fresh install (I have tried with precompiled package and built pack= age from ports) mongod fails to start. See below for more details. 1. When starting mongod using service control, mongod fails to start with t= he following error: Starting mongod. /usr/local/etc/rc.d/mongod: WARNING: failed to start mongod 2. When starting mongod using the direct command, it fails to start as well= (on the first attempt). The output is below: mongod --dbpath /pools/db/mongod/6.0.2 --bind_ip_all {"t":{"$date":"2022-11-09T06:14:07.732+00:00"},"s":"I", "c":"NETWORK",=20 "id":4915701, "ctx":"-","msg":"Initialized wire specification","attr":{"spec":{"incomingExternalClient":{"minWireVersion":0= ,"maxWireVersion":17},"incomingInternalClient":{"minWireVersion":0,"maxWire= Version":17},"outgoing":{"minWireVersion":6,"maxWireVersion":17},"isInterna= lClient":true}}} {"t":{"$date":"2022-11-09T06:14:07.734+00:00"},"s":"I", "c":"CONTROL",=20 "id":23285, "ctx":"-","msg":"Automatically disabling TLS 1.0, to force-en= able TLS 1.0 specify --sslDisabledProtocols 'none'"} {"t":{"$date":"2022-11-09T06:14:07.735+00:00"},"s":"I", "c":"NETWORK",=20 "id":4648602, "ctx":"thread1","msg":"Implicit TCP FastOpen in use."} {"t":{"$date":"2022-11-09T06:14:07.736+00:00"},"s":"I", "c":"REPL",=20=20= =20=20 "id":5123008, "ctx":"thread1","msg":"Successfully registered PrimaryOnlyService","attr":{"service":"TenantMigrationDonorService","namesp= ace":"config.tenantMigrationDonors"}} {"t":{"$date":"2022-11-09T06:14:07.736+00:00"},"s":"I", "c":"REPL",=20=20= =20=20 "id":5123008, "ctx":"thread1","msg":"Successfully registered PrimaryOnlyService","attr":{"service":"TenantMigrationRecipientService","na= mespace":"config.tenantMigrationRecipients"}} {"t":{"$date":"2022-11-09T06:14:07.736+00:00"},"s":"I", "c":"REPL",=20=20= =20=20 "id":5123008, "ctx":"thread1","msg":"Successfully registered PrimaryOnlyService","attr":{"service":"ShardSplitDonorService","namespace":= "config.tenantSplitDonors"}} {"t":{"$date":"2022-11-09T06:14:07.736+00:00"},"s":"I", "c":"CONTROL",=20 "id":5945603, "ctx":"thread1","msg":"Multi threading initialized"} {"t":{"$date":"2022-11-09T06:14:07.737+00:00"},"s":"I", "c":"CONTROL",=20 "id":4615611, "ctx":"initandlisten","msg":"MongoDB starting","attr":{"pid":2484,"port":27017,"dbPath":".","architecture":"64-b= it","host":"dart"}} {"t":{"$date":"2022-11-09T06:14:07.737+00:00"},"s":"I", "c":"CONTROL",=20 "id":23403, "ctx":"initandlisten","msg":"Build Info","attr":{"buildInfo":{"version":"6.0.2","gitVersion":"nogitversion","o= penSSLVersion":"OpenSSL 1.1.1o-freebsd 3 May 2022","modules":[],"allocator":"system","environment":{"distarch":"x86_64",= "target_arch":"x86_64"}}}} {"t":{"$date":"2022-11-09T06:14:07.737+00:00"},"s":"I", "c":"CONTROL",=20 "id":51765, "ctx":"initandlisten","msg":"Operating System","attr":{"os":{"name":"FreeBSD","version":"FreeBSD 13.1-RELEASE-p3 GENERIC\n"}}} {"t":{"$date":"2022-11-09T06:14:07.737+00:00"},"s":"I", "c":"CONTROL",=20 "id":21951, "ctx":"initandlisten","msg":"Options set by command line","attr":{"options":{"net":{"bindIp":"*"},"storage":{"dbPath":"."}}}} {"t":{"$date":"2022-11-09T06:14:07.738+00:00"},"s":"I", "c":"STORAGE",=20 "id":22315, "ctx":"initandlisten","msg":"Opening WiredTiger","attr":{"config":"create,cache_size=3D7608M,session_max=3D33000= ,eviction=3D(threads_min=3D4,threads_max=3D4),config_base=3Dfalse,statistic= s=3D(fast),log=3D(enabled=3Dtrue,remove=3Dtrue,path=3Djournal,compressor=3D= snappy),builtin_extension_config=3D(zstd=3D(compression_level=3D6)),file_ma= nager=3D(close_idle_time=3D600,close_scan_interval=3D10,close_handle_minimu= m=3D2000),statistics_log=3D(wait=3D0),json_output=3D(error,message),verbose= =3D[recovery_progress:1,checkpoint_progress:1,compact_progress:1,backup:0,c= heckpoint:0,compact:0,evict:0,history_store:0,recovery:0,rts:0,salvage:0,ti= ered:0,timestamp:0,transaction:0,verify:0,log:0],"}} {"t":{"$date":"2022-11-09T06:14:08.357+00:00"},"s":"I", "c":"STORAGE",=20 "id":4795906, "ctx":"initandlisten","msg":"WiredTiger opened","attr":{"durationMillis":619}} {"t":{"$date":"2022-11-09T06:14:08.357+00:00"},"s":"I", "c":"RECOVERY", "id":23987, "ctx":"initandlisten","msg":"WiredTiger recoveryTimestamp","attr":{"recoveryTimestamp":{"$timestamp":{"t":0,"i":0}}= }} {"t":{"$date":"2022-11-09T06:14:08.366+00:00"},"s":"W", "c":"CONTROL",=20 "id":22120, "ctx":"initandlisten","msg":"Access control is not enabled for the database. Read and write access to data and configuration is unrestricted","tags":["startupWarnings"]} {"t":{"$date":"2022-11-09T06:14:08.366+00:00"},"s":"W", "c":"CONTROL",=20 "id":22138, "ctx":"initandlisten","msg":"You are running this process as = the root user, which is not recommended","tags":["startupWarnings"]} {"t":{"$date":"2022-11-09T06:14:08.366+00:00"},"s":"I", "c":"STORAGE",=20 "id":20320,=20=20 "ctx":"initandlisten","msg":"createCollection","attr":{"namespace":"admin.s= ystem.version","uuidDisposition":"provided","uuid":{"uuid":{"$uuid":"27d41c= ee-da5b-430c-a60e-f7b3121b3725"}},"options":{"uuid":{"$uuid":"27d41cee-da5b= -430c-a60e-f7b3121b3725"}}}} {"t":{"$date":"2022-11-09T06:14:08.372+00:00"},"s":"I", "c":"INDEX",=20=20= =20 "id":20345, "ctx":"initandlisten","msg":"Index build: done building","attr":{"buildUUID":null,"collectionUUID":{"uuid":{"$uuid":"27d41= cee-da5b-430c-a60e-f7b3121b3725"}},"namespace":"admin.system.version","inde= x":"_id_","ident":"index-1-156332478393131353","collectionIdent":"collectio= n-0-156332478393131353","commitTimestamp":null}} {"t":{"$date":"2022-11-09T06:14:08.372+00:00"},"s":"I", "c":"REPL",=20=20= =20=20 "id":20459, "ctx":"initandlisten","msg":"Setting featureCompatibilityVersion","attr":{"newVersion":"6.0"}} {"t":{"$date":"2022-11-09T06:14:08.372+00:00"},"s":"I", "c":"REPL",=20=20= =20=20 "id":5853300, "ctx":"initandlisten","msg":"current featureCompatibilityVers= ion value","attr":{"featureCompatibilityVersion":"6.0","context":"setFCV"}} {"t":{"$date":"2022-11-09T06:14:08.372+00:00"},"s":"I", "c":"NETWORK",=20 "id":4915702, "ctx":"initandlisten","msg":"Updated wire specification","attr":{"oldSpec":{"incomingExternalClient":{"minWireVersion= ":0,"maxWireVersion":17},"incomingInternalClient":{"minWireVersion":0,"maxW= ireVersion":17},"outgoing":{"minWireVersion":6,"maxWireVersion":17},"isInte= rnalClient":true},"newSpec":{"incomingExternalClient":{"minWireVersion":0,"= maxWireVersion":17},"incomingInternalClient":{"minWireVersion":17,"maxWireV= ersion":17},"outgoing":{"minWireVersion":17,"maxWireVersion":17},"isInterna= lClient":true}}} {"t":{"$date":"2022-11-09T06:14:08.372+00:00"},"s":"I", "c":"NETWORK",=20 "id":4915702, "ctx":"initandlisten","msg":"Updated wire specification","attr":{"oldSpec":{"incomingExternalClient":{"minWireVersion= ":0,"maxWireVersion":17},"incomingInternalClient":{"minWireVersion":17,"max= WireVersion":17},"outgoing":{"minWireVersion":17,"maxWireVersion":17},"isIn= ternalClient":true},"newSpec":{"incomingExternalClient":{"minWireVersion":0= ,"maxWireVersion":17},"incomingInternalClient":{"minWireVersion":17,"maxWir= eVersion":17},"outgoing":{"minWireVersion":17,"maxWireVersion":17},"isInter= nalClient":true}}} {"t":{"$date":"2022-11-09T06:14:08.372+00:00"},"s":"I", "c":"REPL",=20=20= =20=20 "id":5853300, "ctx":"initandlisten","msg":"current featureCompatibilityVers= ion value","attr":{"featureCompatibilityVersion":"6.0","context":"startup"}} {"t":{"$date":"2022-11-09T06:14:08.372+00:00"},"s":"I", "c":"STORAGE",=20 "id":5071100, "ctx":"initandlisten","msg":"Clearing temp directory"} {"t":{"$date":"2022-11-09T06:14:08.372+00:00"},"s":"I", "c":"CONTROL",=20 "id":20536, "ctx":"initandlisten","msg":"Flow Control is enabled on this deployment"} {"t":{"$date":"2022-11-09T06:14:08.372+00:00"},"s":"I", "c":"FTDC",=20=20= =20=20 "id":20625, "ctx":"initandlisten","msg":"Initializing full-time diagnostic data capture","attr":{"dataDirectory":"./diagnostic.data"}} {"t":{"$date":"2022-11-09T06:14:08.373+00:00"},"s":"F", "c":"CONTROL",=20 "id":6384300, "ctx":"initandlisten","msg":"Writing fatal message","attr":{"message":"Invalid access at address: 0x0\n"}} {"t":{"$date":"2022-11-09T06:14:08.373+00:00"},"s":"F", "c":"CONTROL",=20 "id":6384300, "ctx":"initandlisten","msg":"Writing fatal message","attr":{"message":"Got signal: 11 (Segmentation fault).\n"}} {"t":{"$date":"2022-11-09T06:14:08.432+00:00"},"s":"E", "c":"CONTROL",=20 "id":31430, "ctx":"initandlisten","msg":"Error collecting stack trace","attr":{"error":"unw_get_proc_name(7FFFFFFFF8A3): unspecified (gener= al) error\nunw_get_proc_name(806310008): unspecified (general) error\nunw_get_proc_name(7FFFFFFFF8A3): unspecified (general) error\nunw_get_proc_name(806310008): unspecified (general) error\n"}} {"t":{"$date":"2022-11-09T06:14:08.432+00:00"},"s":"I", "c":"CONTROL",=20 "id":31380,=20=20 "ctx":"initandlisten","msg":"BACKTRACE","attr":{"bt":{"backtrace":[{"a":"61= 16D20","b":"1021000","o":"50F5D20","s":"_ZN5mongo15printStackTraceERNS_14St= ackTraceSinkE","C":"mongo::printStackTrace(mongo::StackTraceSink&)","s+":"1= 30"},{"a":"61135D4","b":"1021000","o":"50F25D4","s":"abruptQuitWithAddrSign= al","C":"signed char","s+":"184"},{"a":"8072E958E","b":"8072CF000","o":"1A58E","s":"_pthrea= d_sigmask","s+":"54E"},{"a":"8072E8B3F","b":"8072CF000","o":"19B3F","s":"_p= 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"id":31445,=20=20 "ctx":"initandlisten","msg":"Frame","attr":{"frame":{"a":"8072E958E","b":"8= 072CF000","o":"1A58E","s":"_pthread_sigmask","s+":"54E"}}} {"t":{"$date":"2022-11-09T06:14:08.432+00:00"},"s":"I", "c":"CONTROL",=20 "id":31445,=20=20 "ctx":"initandlisten","msg":"Frame","attr":{"frame":{"a":"8072E8B3F","b":"8= 072CF000","o":"19B3F","s":"_pthread_setschedparam","s+":"82F"}}} {"t":{"$date":"2022-11-09T06:14:08.432+00:00"},"s":"I", "c":"CONTROL",=20 "id":31445,=20=20 "ctx":"initandlisten","msg":"Frame","attr":{"frame":{"a":"7FFFFFFFF8A3"}}} {"t":{"$date":"2022-11-09T06:14:08.432+00:00"},"s":"I", "c":"CONTROL",=20 "id":31445,=20=20 "ctx":"initandlisten","msg":"Frame","attr":{"frame":{"a":"4D6B84A","b":"102= 1000","o":"3D4A84A","s":"_ZN5mongo8LockHead27migratePartitionedLockHeadsEv"= ,"C":"mongo::LockHead::migratePartitionedLockHeads()","s+":"AA"}}} {"t":{"$date":"2022-11-09T06:14:08.432+00:00"},"s":"I", "c":"CONTROL",=20 "id":31445,=20=20 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"id":31445,=20=20 "ctx":"initandlisten","msg":"Frame","attr":{"frame":{"a":"30995E9","b":"102= 1000","o":"20785E9","s":"main","C":"unsigned long","s+":"9"}}} {"t":{"$date":"2022-11-09T06:14:08.432+00:00"},"s":"I", "c":"CONTROL",=20 "id":31445,=20=20 "ctx":"initandlisten","msg":"Frame","attr":{"frame":{"a":"309939D","b":"102= 1000","o":"207839D","s":"_start","s+":"10D"}}} {"t":{"$date":"2022-11-09T06:14:08.432+00:00"},"s":"I", "c":"CONTROL",=20 "id":31445,=20=20 "ctx":"initandlisten","msg":"Frame","attr":{"frame":{"a":"806310008"}}} Segmentation fault I ran the command a second time after the initial failure and the mongo dae= mon starts properly. Shutting down the daemon (after successful 2nd attempt) and restarting it causes a segmentation fault. I tried this again on a different machine (amd64) and it started the first = time if I used the -vvvvv flag. However, it failed to start again due to another segmentation fault. One other note, this issue also applies to arm64 as well. I compiled mongod= b60 from the ports on my pine64 (RockPro). Both times they failed to start with= a segmentation fault. When compiling on arm64 machines, I received multiple failures during compilation. Usually error -9 or -1. I made a few modifications to get them= to compile: 1. sysctl vm.pageout_oom_seq=3D120 2. use an NVME drive as swap 3. turned on powerd using adaptive mode I was only able to successfully compile on my pine64 (RockPro) after using a NVME drive as swap. Swap space went up to about 12GB used at its peak. I was not able to compile on my Raspberry Pi 4. I used a packaged version of the build from the RockPro device to test on Raspberry Pi 4. Please let me know if you need any additional information or have any questions. --=20 You are receiving this mail because: You are the assignee for the bug.=