[package - 150amd64-default][science/neko] Failed for neko-1.0.3 in configure

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From: <pkg-fallout_at_FreeBSD.org>
Date: Tue, 02 Jun 2026 01:04:27 UTC
You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer:     yuri@FreeBSD.org
Log URL:        https://pkg-status.freebsd.org/beefy23/data/150amd64-default/3f253a0d77dd/logs/neko-1.0.3.log
Build URL:      https://pkg-status.freebsd.org/beefy23/build.html?mastername=150amd64-default&build=3f253a0d77dd
Log:

=>> Building science/neko
build started at Tue Jun  2 01:04:24 UTC 2026
port directory: /usr/ports/science/neko
package name: neko-1.0.3
building for: FreeBSD 150amd64-default-job-13 15.0-RELEASE-p9 FreeBSD 15.0-RELEASE-p9 amd64
maintained by: yuri@FreeBSD.org
Makefile datestamp: -rw-r--r--  1 root wheel 1564 May  9 01:01 /usr/ports/science/neko/Makefile
Ports top last git commit: 3f253a0d77ddef867d98e7beba90ecef7c93542b
Ports top unclean checkout: no
Port dir last git commit: e8104113f1e97f507c2d55ced647408cd0c8e5e2
Port dir unclean checkout: no
Poudriere version: poudriere-git-3.4.8
Host OSVERSION: 1600018
Jail OSVERSION: 1500068
Job Id: 13

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POUDRIEREPATH=/usr/local/bin/poudriere
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---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
MAKE_ARGS=
---End Poudriere Port Flags/Env---

---Begin OPTIONS List---
---End OPTIONS List---

--MAINTAINER--
yuri@FreeBSD.org
--End MAINTAINER--

--CONFIGURE_ARGS--
--prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
F77="gfortran14" F90="gfortran14" FC="gfortran14"	 FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc14" F90FLAGS="-O -Wl,-rpath=/usr/local/lib/gcc14" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc14" MAKE=/usr/local/bin/gmake PKG_CONFIG=pkgconf PYTHON="/usr/local/bin/python3.11" XDG_DATA_HOME=/wrkdirs/usr/ports/science/neko/work  XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/neko/work  XDG_CACHE_HOME=/wrkdirs/usr/ports/science/neko/work/.cache  HOME=/wrkdirs/usr/ports/science/neko/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/neko/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/science/neko/work/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig SHELL=/bin/sh CONFIG_SHELL=/bin/sh ADDR2LINE="/usr/local/bin/addr2line" AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" OBJCOPY="/usr/l
ocal/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" STRIP="/usr/local/bin/strip" CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--

--MAKE_ENV--
F77="gfortran14" F90="gfortran14" FC="gfortran14"	 FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc14" F90FLAGS="-O -Wl,-rpath=/usr/local/lib/gcc14" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc14" XDG_DATA_HOME=/wrkdirs/usr/ports/science/neko/work  XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/neko/work  XDG_CACHE_HOME=/wrkdirs/usr/ports/science/neko/work/.cache  HOME=/wrkdirs/usr/ports/science/neko/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/neko/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/science/neko/work/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES ADDR2LINE="/usr/local/bin/addr2line" AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump"
 RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" STRIP="/usr/local/bin/strip" PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  -fstack-protector-strong -fno-strict-aliasing "  CPP="cpp" CPPFLAGS=""  LDFLAGS=" -Wl,-rpath=/usr/local/lib/gcc14  -L/usr/local/lib/gcc14 " LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing   " BSD_INSTALL_PROGRAM="install  -s -m 555"  BSD_INSTALL_LIB="install  -s -m 0644"  BSD_INSTALL_SCRIPT="install  -m 555"  BSD_INSTALL_DATA="install  -m 0644"  BSD_INSTALL_MAN="install  -m 444"
--End MAKE_ENV--

--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.11  PYTHON_LIBDIR=lib/python3.11  PYTHON_PLATFORM=freebsd15  PYTHON_SITELIBDIR=lib/python3.11/site-packages  PYTHON_SUFFIX=311  PYTHON_BASESUFFIX=311  PYTHON_TAG=.cpython-311  PYTHON_SOABI=.cpython-311  PYTHON_VER=3.11  PYTHON_BASEVER=3.11  PYTHON_VERSION=python3.11 PYTHON2="@comment " PYTHON3="" OSREL=15.0 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/neko"  EXAMPLESDIR="share/examples/neko"  DATADIR="share/neko"  WWWDIR="www/neko"  ETCDIR="etc/neko"
--End PLIST_SUB--

--SUB_LIST--
PYTHON_INCLUDEDIR=/usr/local/include/python3.11  PYTHON_LIBDIR=/usr/local/lib/python3.11  PYTHON_PLATFORM=freebsd15  PYTHON_SITELIBDIR=/usr/local/lib/python3.11/site-packages  PYTHON_SUFFIX=311  PYTHON_BASESUFFIX=311  PYTHON_TAG=.cpython-311  PYTHON_SOABI=.cpython-311  PYTHON_VER=3.11  PYTHON_BASEVER=3.11  PYTHON_VERSION=python3.11 PYTHON2="@comment " PYTHON3="" PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/neko DOCSDIR=/usr/local/share/doc/neko EXAMPLESDIR=/usr/local/share/examples/neko  WWWDIR=/usr/local/www/neko ETCDIR=/usr/local/etc/neko
--End SUB_LIST--

---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
####  ####
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure.  It currently retries the same
# failed mirror and then fails rather then trying another.  It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 3 jobs
MAKE_JOBS_NUMBER=3
#### Misc Poudriere ####
.include "/etc/make.conf.ports_env"
GID=0
UID=0
---End make.conf---
--Resource limits--
cpu time               (seconds, -t)  unlimited
file size           (512-blocks, -f)  unlimited
data seg size           (kbytes, -d)  33554432
stack size              (kbytes, -s)  524288
core file size      (512-blocks, -c)  unlimited
max memory size         (kbytes, -m)  unlimited
locked memory           (kbytes, -l)  unlimited
max user processes              (-u)  89999
open files                      (-n)  8192
virtual mem size        (kbytes, -v)  unlimited
swap limit              (kbytes, -w)  unlimited
socket buffer size       (bytes, -b)  unlimited
pseudo-terminals                (-p)  unlimited
kqueues                         (-k)  unlimited
umtx shared locks               (-o)  unlimited
pipebuf                         (-y)  unlimited
--End resource limits--
=======================<phase: check-sanity   >============================
===== env: NO_DEPENDS=yes USER=root UID=0 GID=0
===>  License BSD3CLAUSE accepted by the user
===========================================================================
=======================<phase: pkg-depends    >============================
===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0
===>   neko-1.0.3 depends on file: /usr/local/sbin/pkg - not found
===>   Installing existing package /packages/All/pkg-2.7.5.pkg
[150amd64-default-job-13] Installing pkg-2.7.5...
[150amd64-default-job-13] Extracting pkg-2.7.5: .......... done
===>   neko-1.0.3 depends on file: /usr/local/sbin/pkg - found
===>   Returning to build of neko-1.0.3
===========================================================================
=======================<phase: fetch-depends  >============================
===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0
===========================================================================
=======================<phase: fetch          >============================
===== env: NO_DEPENDS=yes USER=root UID=0 GID=0
===>  License BSD3CLAUSE accepted by the user
===> Fetching all distfiles required by neko-1.0.3 for building
===========================================================================
=======================<phase: checksum       >============================
===== env: NO_DEPENDS=yes USER=root UID=0 GID=0
===>  License BSD3CLAUSE accepted by the user
===> Fetching all distfiles required by neko-1.0.3 for building
=> SHA256 Checksum OK for neko-1.0.3.tar.gz.
===========================================================================
=======================<phase: extract-depends>============================
===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0
===========================================================================
=======================<phase: extract        >============================
===== env: NO_DEPENDS=yes USER=root UID=0 GID=0
===>  License BSD3CLAUSE accepted by the user
===> Fetching all distfiles required by neko-1.0.3 for building
===>  Extracting for neko-1.0.3
=> SHA256 Checksum OK for neko-1.0.3.tar.gz.
===========================================================================
=======================<phase: patch-depends  >============================
===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0
===========================================================================
=======================<phase: patch          >============================
===== env: NO_DEPENDS=yes USER=root UID=0 GID=0
===>  Patching for neko-1.0.3
===>  Applying FreeBSD patches for neko-1.0.3 from /usr/ports/science/neko/files
===========================================================================
=======================<phase: build-depends  >============================
===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0
===>   neko-1.0.3 depends on executable: gfortran14 - not found
===>   Installing existing package /packages/All/gcc14-14.2.0_4.pkg
[150amd64-default-job-13] Installing gcc14-14.2.0_4...
[150amd64-default-job-13] `-- Installing binutils-2.44,1...
[150amd64-default-job-13] |   `-- Installing indexinfo-0.3.1_1...
[150amd64-default-job-13] |   `-- Extracting indexinfo-0.3.1_1: .... done
[150amd64-default-job-13] |   `-- Installing zstd-1.5.7_2...
[150amd64-default-job-13] |   | `-- Installing liblz4-1.10.0_2,1...
[150amd64-default-job-13] |   | `-- Extracting liblz4-1.10.0_2,1: .......... done
[150amd64-default-job-13] |   `-- Extracting zstd-1.5.7_2: .......... done
[150amd64-default-job-13] `-- Extracting binutils-2.44,1: .......... done
[150amd64-default-job-13] `-- Installing gmp-6.3.0...
[150amd64-default-job-13] `-- Extracting gmp-6.3.0: .......... done
[150amd64-default-job-13] `-- Installing mpc-1.4.1...
[150amd64-default-job-13] |   `-- Installing mpfr-4.2.2,1...
[150amd64-default-job-13] |   `-- Extracting mpfr-4.2.2,1: .......... done
[150amd64-default-job-13] `-- Extracting mpc-1.4.1: .......... done
[150amd64-default-job-13] Extracting gcc14-14.2.0_4: .......... done
=====
Message from gcc14-14.2.0_4:

--
To ensure binaries built with this toolchain find appropriate versions
of the necessary run-time libraries, you may want to link using

  -Wl,-rpath=/usr/local/lib/gcc14

For ports leveraging USE_GCC, USES=compiler, or USES=fortran this happens
transparently.
===>   neko-1.0.3 depends on executable: gfortran14 - found
===>   Returning to build of neko-1.0.3
===>   neko-1.0.3 depends on package: gmake>=4.4.1 - not found
===>   Installing existing package /packages/All/gmake-4.4.1.pkg
[150amd64-default-job-13] Installing gmake-4.4.1...
[150amd64-default-job-13] `-- Installing gettext-runtime-1.0_1...
[150amd64-default-job-13] `-- Extracting gettext-runtime-1.0_1: .......... done
[150amd64-default-job-13] Extracting gmake-4.4.1: .......... done
===>   neko-1.0.3 depends on package: gmake>=4.4.1 - found
===>   Returning to build of neko-1.0.3
===>   neko-1.0.3 depends on package: pkgconf>=1.3.0_1 - not found
===>   Installing existing package /packages/All/pkgconf-2.4.3_1,1.pkg
[150amd64-default-job-13] Installing pkgconf-2.4.3_1,1...
[150amd64-default-job-13] Extracting pkgconf-2.4.3_1,1: .......... done
===>   neko-1.0.3 depends on package: pkgconf>=1.3.0_1 - found
===>   Returning to build of neko-1.0.3
===>   neko-1.0.3 depends on file: /usr/local/bin/as - found
===========================================================================
=======================<phase: lib-depends    >============================
===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0
===>   neko-1.0.3 depends on shared library: libjsonfortran.so - not found
===>   Installing existing package /packages/All/json-fortran-9.3.1.pkg
[150amd64-default-job-13] Installing json-fortran-9.3.1...
[150amd64-default-job-13] Extracting json-fortran-9.3.1: .......... done
===>   neko-1.0.3 depends on shared library: libjsonfortran.so - found (/usr/local/lib/libjsonfortran.so)
===>   Returning to build of neko-1.0.3
===>   neko-1.0.3 depends on shared library: libopenblas.so - not found
===>   Installing existing package /packages/All/openblas-0.3.33,2.pkg
[150amd64-default-job-13] Installing openblas-0.3.33,2...
[150amd64-default-job-13] Extracting openblas-0.3.33,2: .......... done
===>   neko-1.0.3 depends on shared library: libopenblas.so - found (/usr/local/lib/libopenblas.so)
===>   Returning to build of neko-1.0.3
===>   neko-1.0.3 depends on shared library: libmpich.so - not found
===>   Installing existing package /packages/All/mpich-5.0.1.pkg
[150amd64-default-job-13] Installing mpich-5.0.1...
[150amd64-default-job-13] `-- Installing hwloc2-2.12.1_1...
[150amd64-default-job-13] |   `-- Installing level-zero-1.28.6...
[150amd64-default-job-13] |   | `-- Installing libfmt-12.1.0...
[150amd64-default-job-13] |   | `-- Extracting libfmt-12.1.0: .......... done
[150amd64-default-job-13] |   | `-- Installing spdlog-1.17.0...
[150amd64-default-job-13] |   | `-- Extracting spdlog-1.17.0: .......... done
[150amd64-default-job-13] |   `-- Extracting level-zero-1.28.6: .......... done
[150amd64-default-job-13] |   `-- Installing libpciaccess-0.19...
[150amd64-default-job-13] |   | `-- Installing hwdata-0.407,1...
[150amd64-default-job-13] |   | `-- Extracting hwdata-0.407,1: .......... done
[150amd64-default-job-13] |   `-- Extracting libpciaccess-0.19: ........ done
[150amd64-default-job-13] |   `-- Installing libxml2-2.15.3...
[150amd64-default-job-13] |   | `-- Installing readline-8.3.3...
[150amd64-default-job-13] |   | `-- Extracting readline-8.3.3: .......... done
[150amd64-default-job-13] |   `-- Extracting libxml2-2.15.3: .......... done
[150amd64-default-job-13] `-- Extracting hwloc2-2.12.1_1: .......... done
[150amd64-default-job-13] `-- Installing json-c-0.18...
[150amd64-default-job-13] `-- Extracting json-c-0.18: .......... done
[150amd64-default-job-13] `-- Installing libepoll-shim-0.0.20240608...
[150amd64-default-job-13] `-- Extracting libepoll-shim-0.0.20240608: .......... done
[150amd64-default-job-13] `-- Installing libfabric-1.15.1_4...
[150amd64-default-job-13] `-- Extracting libfabric-1.15.1_4: .......... done
[150amd64-default-job-13] `-- Installing perl5-5.42.2...
[150amd64-default-job-13] `-- Extracting perl5-5.42.2: .......... done
[150amd64-default-job-13] Extracting mpich-5.0.1: .......... done
===>   neko-1.0.3 depends on shared library: libmpich.so - found (/usr/local/lib/libmpich.so)
===>   Returning to build of neko-1.0.3
===========================================================================
=======================<phase: configure      >============================
===== env: NO_DEPENDS=yes USER=root UID=0 GID=0
===>  Missing "/usr/local/bin/python3.11" to create a binary alias at "/wrkdirs/usr/ports/science/neko/work/.bin/python"
*** Error code 1

Stop.
make: stopped making "configure" in /usr/ports/science/neko