[package - 141amd64-default][databases/py-tiledb] Failed for py311-tiledb-0.33.3 in build
- Go to: [ bottom of page ] [ top of archives ] [ this month ]
Date: Tue, 11 Mar 2025 16:27:05 UTC
You are receiving this mail as a port that you maintain is failing to build on the FreeBSD package build server. Please investigate the failure and submit a PR to fix build. Maintainer: sunpoet@FreeBSD.org Log URL: https://pkg-status.freebsd.org/beefy22/data/141amd64-default/02dd5021d6f9/logs/py311-tiledb-0.33.3.log Build URL: https://pkg-status.freebsd.org/beefy22/build.html?mastername=141amd64-default&build=02dd5021d6f9 Log: =>> Building databases/py-tiledb build started at Tue Mar 11 16:26:59 UTC 2025 port directory: /usr/ports/databases/py-tiledb package name: py311-tiledb-0.33.3 building for: FreeBSD 141amd64-default-job-34 14.1-RELEASE-p8 FreeBSD 14.1-RELEASE-p8 amd64 maintained by: sunpoet@FreeBSD.org Makefile datestamp: -rw-r--r-- 1 root wheel 1238 Feb 20 01:01 /usr/ports/databases/py-tiledb/Makefile Ports top last git commit: 02dd5021d Ports top unclean checkout: no Port dir last git commit: 1bb147345 Port dir unclean checkout: no Poudriere version: poudriere-git-3.4.2-7-gf78625a5 Host OSVERSION: 1500028 Jail OSVERSION: 1401000 Job Id: 34 ---Begin Environment--- SHELL=/bin/sh OSVERSION=1401000 UNAME_v=FreeBSD 14.1-RELEASE-p8 UNAME_r=14.1-RELEASE-p8 BLOCKSIZE=K MAIL=/var/mail/root MM_CHARSET=UTF-8 LANG=C.UTF-8 STATUS=1 HOME=/root PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin MAKE_OBJDIR_CHECK_WRITABLE=0 LOCALBASE=/usr/local USER=root POUDRIERE_NAME=poudriere-git LIBEXECPREFIX=/usr/local/libexec/poudriere POUDRIERE_VERSION=3.4.2-7-gf78625a5 MASTERMNT=/usr/local/poudriere/data/.m/141amd64-default/ref LC_COLLATE=C POUDRIERE_BUILD_TYPE=bulk PACKAGE_BUILDING=yes SAVED_TERM= OUTPUT_REDIRECTED_STDERR=4 OUTPUT_REDIRECTED=1 PWD=/usr/local/poudriere/data/.m/141amd64-default/34/.p OUTPUT_REDIRECTED_STDOUT=3 P_PORTS_FEATURES=FLAVORS SUBPACKAGES SELECTED_OPTIONS MASTERNAME=141amd64-default SCRIPTPREFIX=/usr/local/share/poudriere SCRIPTNAME=bulk.sh OLDPWD=/usr/local/poudriere/data/.m/141amd64-default/ref/.p/pool POUDRIERE_PKGNAME=poudriere-git-3.4.2-7-gf78625a5 SCRIPTPATH=/usr/local/share/poudriere/bulk.sh POUDRIEREPATH=/usr/local/bin/poudriere ---End Environment--- ---Begin Poudriere Port Flags/Env--- PORT_FLAGS= PKGENV= FLAVOR=py311 MAKE_ARGS= FLAVOR=py311 ---End Poudriere Port Flags/Env--- ---Begin OPTIONS List--- ---End OPTIONS List--- --MAINTAINER-- sunpoet@FreeBSD.org --End MAINTAINER-- --CONFIGURE_ARGS-- --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- PYTHON="/usr/local/bin/python3.11" XDG_DATA_HOME=/wrkdirs/usr/ports/databases/py-tiledb/work-py311 XDG_CONFIG_HOME=/wrkdirs/usr/ports/databases/py-tiledb/work-py311 XDG_CACHE_HOME=/wrkdirs/usr/ports/databases/py-tiledb/work-py311/.cache HOME=/wrkdirs/usr/ports/databases/py-tiledb/work-py311 TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/databases/py-tiledb/work-py311/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/databases/py-tiledb/work-py311/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig SHELL=/bin/sh CONFIG_SHELL=/bin/sh CMAKE_PREFIX_PATH="/usr/local" --End CONFIGURE_ENV-- --MAKE_ENV-- TILEDB_PATH=/usr/local XDG_DATA_HOME=/wrkdirs/usr/ports/databases/py-tiledb/work-py311 XDG_CONFIG_HOME=/wrkdirs/usr/ports/databases/py-tiledb/work-py311 XDG_CACHE_HOME=/wrkdirs/usr/ports/databases/py-tiledb/work-py311/.cache HOME=/wrkdirs/usr/ports/databases/py-tiledb/work-py311 TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/databases/py-tiledb/work-py311/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/databases/py-tiledb/work-py311/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES PREFIX=/usr/local LOCALBASE=/usr/local CC="cc" CFLAGS="-O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing " CPP="cpp" CPPFLAGS="-isystem /usr/local/include" LDFLAGS=" -fstack-protector-strong " LIBS="-L/usr/local/lib" CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector-strong -isystem /usr/local/includ e -fno-strict-aliasing -isystem /usr/local/include " BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" --End MAKE_ENV-- --PLIST_SUB-- PYTHON_INCLUDEDIR=include/python3.11 PYTHON_LIBDIR=lib/python3.11 PYTHON_PLATFORM=freebsd14 PYTHON_SITELIBDIR=lib/python3.11/site-packages PYTHON_SUFFIX=311 PYTHON_EXT_SUFFIX=.cpython-311 PYTHON_VER=3.11 PYTHON_VERSION=python3.11 PYTHON2="@comment " PYTHON3="" OSREL=14.1 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/py311-tiledb" EXAMPLESDIR="share/examples/py311-tiledb" DATADIR="share/py311-tiledb" WWWDIR="www/py311-tiledb" ETCDIR="etc/py311-tiledb" --End PLIST_SUB-- --SUB_LIST-- PYTHON_INCLUDEDIR=/usr/local/include/python3.11 PYTHON_LIBDIR=/usr/local/lib/python3.11 PYTHON_PLATFORM=freebsd14 PYTHON_SITELIBDIR=/usr/local/lib/python3.11/site-packages PYTHON_SUFFIX=311 PYTHON_EXT_SUFFIX=.cpython-311 PYTHON_VER=3.11 PYTHON_VERSION=python3.11 PYTHON2="@comment " PYTHON3="" PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/py311-tiledb DOCSDIR=/usr/local/share/doc/py311-tiledb EXAMPLESDIR=/usr/local/share/examples/py311-tiledb WWWDIR=/usr/local/www/py311-tiledb ETCDIR=/usr/local/etc/py311-tiledb --End SUB_LIST-- ---Begin make.conf--- USE_PACKAGE_DEPENDS=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles PACKAGE_BUILDING=yes PACKAGE_BUILDING_FLAVORS=yes #### #### # XXX: We really need this but cannot use it while 'make checksum' does not # try the next mirror on checksum failure. It currently retries the same # failed mirror and then fails rather then trying another. It *does* # try the next if the size is mismatched though. #MASTER_SITE_FREEBSD=yes # Build ALLOW_MAKE_JOBS_PACKAGES with 3 jobs MAKE_JOBS_NUMBER=3 #### Misc Poudriere #### .include "/etc/make.conf.ports_env" GID=0 UID=0 DISABLE_MAKE_JOBS=poudriere ---End make.conf--- --Resource limits-- cpu time (seconds, -t) unlimited file size (512-blocks, -f) unlimited data seg size (kbytes, -d) 33554432 stack size (kbytes, -s) 524288 core file size (512-blocks, -c) unlimited max memory size (kbytes, -m) unlimited locked memory (kbytes, -l) unlimited max user processes (-u) 89999 open files (-n) 8192 virtual mem size (kbytes, -v) unlimited swap limit (kbytes, -w) unlimited socket buffer size (bytes, -b) unlimited pseudo-terminals (-p) unlimited kqueues (-k) unlimited umtx shared locks (-o) unlimited --End resource limits-- =======================<phase: check-sanity >============================ ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> License MIT accepted by the user =========================================================================== =======================<phase: pkg-depends >============================ ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 ===> py311-tiledb-0.33.3 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-2.0.6.pkg [141amd64-default-job-34] Installing pkg-2.0.6... [141amd64-default-job-34] Extracting pkg-2.0.6: .......... done ===> py311-tiledb-0.33.3 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of py311-tiledb-0.33.3 =========================================================================== =======================<phase: fetch-depends >============================ ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =======================<phase: fetch >============================ ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> License MIT accepted by the user ===> Fetching all distfiles required by py311-tiledb-0.33.3 for building =========================================================================== =======================<phase: checksum >============================ ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> License MIT accepted by the user ===> Fetching all distfiles required by py311-tiledb-0.33.3 for building => SHA256 Checksum OK for tiledb-0.33.3.tar.gz. =========================================================================== =======================<phase: extract-depends>============================ ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =======================<phase: extract >============================ ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> License MIT accepted by the user ===> Fetching all distfiles required by py311-tiledb-0.33.3 for building ===> Extracting for py311-tiledb-0.33.3 => SHA256 Checksum OK for tiledb-0.33.3.tar.gz. =========================================================================== =======================<phase: patch-depends >============================ ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 =========================================================================== =======================<phase: patch >============================ ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Patching for py311-tiledb-0.33.3 ===> Applying FreeBSD patches for py311-tiledb-0.33.3 from /usr/ports/databases/py-tiledb/files =========================================================================== =======================<phase: build-depends >============================ ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 ===> py311-tiledb-0.33.3 depends on package: py311-numpy>=1.25,1 - not found ===> Installing existing package /packages/All/py311-numpy-1.26.4_6,1.pkg [141amd64-default-job-34] Installing py311-numpy-1.26.4_6,1... [141amd64-default-job-34] `-- Installing gcc13-13.3.0... [141amd64-default-job-34] | `-- Installing binutils-2.44,1... [141amd64-default-job-34] | | `-- Installing indexinfo-0.3.1_1... [141amd64-default-job-34] | | `-- Extracting indexinfo-0.3.1_1: .... done [141amd64-default-job-34] | | `-- Installing zstd-1.5.7... [141amd64-default-job-34] | | `-- Installing liblz4-1.10.0,1... [141amd64-default-job-34] | | `-- Extracting liblz4-1.10.0,1: .......... done [141amd64-default-job-34] | | `-- Extracting zstd-1.5.7: .......... done [141amd64-default-job-34] | `-- Extracting binutils-2.44,1: .......... done [141amd64-default-job-34] | `-- Installing gmp-6.3.0... [141amd64-default-job-34] | `-- Extracting gmp-6.3.0: .......... done [141amd64-default-job-34] | `-- Installing mpc-1.3.1_1... [141amd64-default-job-34] | | `-- Installing mpfr-4.2.1,1... [141amd64-default-job-34] | | `-- Extracting mpfr-4.2.1,1: .......... done [141amd64-default-job-34] | `-- Extracting mpc-1.3.1_1: ......... done [141amd64-default-job-34] `-- Extracting gcc13-13.3.0: .......... done [141amd64-default-job-34] `-- Installing openblas-0.3.29_1,2... [141amd64-default-job-34] `-- Extracting openblas-0.3.29_1,2: .......... done [141amd64-default-job-34] `-- Installing python311-3.11.11... [141amd64-default-job-34] | `-- Installing gettext-runtime-0.23.1... [141amd64-default-job-34] | `-- Extracting gettext-runtime-0.23.1: .......... done [141amd64-default-job-34] | `-- Installing libffi-3.4.6... [141amd64-default-job-34] | `-- Extracting libffi-3.4.6: .......... done [141amd64-default-job-34] | `-- Installing mpdecimal-4.0.0... [141amd64-default-job-34] | `-- Extracting mpdecimal-4.0.0: .......... done [141amd64-default-job-34] | `-- Installing readline-8.2.13_2... [141amd64-default-job-34] | `-- Extracting readline-8.2.13_2: .......... done [141amd64-default-job-34] `-- Extracting python311-3.11.11: .......... done [141amd64-default-job-34] `-- Installing suitesparse-umfpack-6.3.5_1... [141amd64-default-job-34] | `-- Installing suitesparse-amd-3.3.3... [141amd64-default-job-34] | | `-- Installing suitesparse-config-7.8.3_1... [141amd64-default-job-34] | | `-- Extracting suitesparse-config-7.8.3_1: .......... done [141amd64-default-job-34] | `-- Extracting suitesparse-amd-3.3.3: .......... done [141amd64-default-job-34] | `-- Installing suitesparse-camd-3.3.3... [141amd64-default-job-34] | `-- Extracting suitesparse-camd-3.3.3: .......... done [141amd64-default-job-34] | `-- Installing suitesparse-ccolamd-3.3.4... [141amd64-default-job-34] | `-- Extracting suitesparse-ccolamd-3.3.4: .......... done [141amd64-default-job-34] | `-- Installing suitesparse-cholmod-5.3.0_1... [141amd64-default-job-34] | | `-- Installing suitesparse-colamd-3.3.4... [141amd64-default-job-34] | | `-- Extracting suitesparse-colamd-3.3.4: .......... done [141amd64-default-job-34] | `-- Extracting suitesparse-cholmod-5.3.0_1: .......... done [141amd64-default-job-34] `-- Extracting suitesparse-umfpack-6.3.5_1: .......... done [141amd64-default-job-34] Extracting py311-numpy-1.26.4_6,1: .......... done ===== Message from gcc13-13.3.0: -- To ensure binaries built with this toolchain find appropriate versions of the necessary run-time libraries, you may want to link using -Wl,-rpath=/usr/local/lib/gcc13 For ports leveraging USE_GCC, USES=compiler, or USES=fortran this happens transparently. ===== Message from python311-3.11.11: -- Note that some standard Python modules are provided as separate ports as they require additional dependencies. They are available as: py311-gdbm databases/py-gdbm@py311 py311-sqlite3 databases/py-sqlite3@py311 py311-tkinter x11-toolkits/py-tkinter@py311 ===> py311-tiledb-0.33.3 depends on package: py311-numpy>=1.25,1 - found ===> Returning to build of py311-tiledb-0.33.3 ===> py311-tiledb-0.33.3 depends on package: py311-pybind11>=0 - not found ===> Installing existing package /packages/All/py311-pybind11-2.13.6.pkg [141amd64-default-job-34] Installing py311-pybind11-2.13.6... [141amd64-default-job-34] Extracting py311-pybind11-2.13.6: .......... done ===> py311-tiledb-0.33.3 depends on package: py311-pybind11>=0 - found ===> Returning to build of py311-tiledb-0.33.3 ===> py311-tiledb-0.33.3 depends on package: py311-scikit-build-core>=0 - not found ===> Installing existing package /packages/All/py311-scikit-build-core-0.11.0.pkg [141amd64-default-job-34] Installing py311-scikit-build-core-0.11.0... [141amd64-default-job-34] `-- Installing py311-packaging-24.2... [141amd64-default-job-34] `-- Extracting py311-packaging-24.2: .......... done [141amd64-default-job-34] `-- Installing py311-pathspec-0.12.1... [141amd64-default-job-34] `-- Extracting py311-pathspec-0.12.1: .......... done [141amd64-default-job-34] Extracting py311-scikit-build-core-0.11.0: .......... done ===> py311-tiledb-0.33.3 depends on package: py311-scikit-build-core>=0 - found ===> Returning to build of py311-tiledb-0.33.3 ===> py311-tiledb-0.33.3 depends on package: py311-setuptools-scm>=0 - not found ===> Installing existing package /packages/All/py311-setuptools-scm-8.0.4.pkg [141amd64-default-job-34] Installing py311-setuptools-scm-8.0.4... [141amd64-default-job-34] `-- Installing py311-typing-extensions-4.12.2... [141amd64-default-job-34] `-- Extracting py311-typing-extensions-4.12.2: .......... done [141amd64-default-job-34] Extracting py311-setuptools-scm-8.0.4: .......... done ===> py311-tiledb-0.33.3 depends on package: py311-setuptools-scm>=0 - found ===> Returning to build of py311-tiledb-0.33.3 ===> py311-tiledb-0.33.3 depends on package: tiledb>=2.27.0 - not found ===> Installing existing package /packages/All/tiledb-2.27.0.pkg [141amd64-default-job-34] Installing tiledb-2.27.0... [141amd64-default-job-34] `-- Installing capnproto1-1.0.2... [141amd64-default-job-34] `-- Extracting capnproto1-1.0.2: .......... done [141amd64-default-job-34] `-- Installing clipp-1.2.3_1... [141amd64-default-job-34] `-- Extracting clipp-1.2.3_1: .... done [141amd64-default-job-34] `-- Installing curl-8.12.1... [141amd64-default-job-34] | `-- Installing brotli-1.1.0,1... [141amd64-default-job-34] | `-- Extracting brotli-1.1.0,1: .......... done [141amd64-default-job-34] | `-- Installing libidn2-2.3.7... [141amd64-default-job-34] | | `-- Installing libunistring-1.3... [141amd64-default-job-34] | | `-- Extracting libunistring-1.3: .......... done [141amd64-default-job-34] | `-- Extracting libidn2-2.3.7: .......... done [141amd64-default-job-34] | `-- Installing libnghttp2-1.64.0... [141amd64-default-job-34] | `-- Extracting libnghttp2-1.64.0: .......... done [141amd64-default-job-34] | `-- Installing libpsl-0.21.5_2... [141amd64-default-job-34] | `-- Extracting libpsl-0.21.5_2: .......... done [141amd64-default-job-34] | `-- Installing libssh2-1.11.1,3... [141amd64-default-job-34] | `-- Extracting libssh2-1.11.1,3: .......... done [141amd64-default-job-34] `-- Extracting curl-8.12.1: .......... done [141amd64-default-job-34] `-- Installing libfmt-10.2.1... [141amd64-default-job-34] `-- Extracting libfmt-10.2.1: .......... done [141amd64-default-job-34] `-- Installing png-1.6.46... [141amd64-default-job-34] `-- Extracting png-1.6.46: .......... done [141amd64-default-job-34] `-- Installing spdlog-1.15.1... [141amd64-default-job-34] `-- Extracting spdlog-1.15.1: .......... done [141amd64-default-job-34] Extracting tiledb-2.27.0: .......... done ===> py311-tiledb-0.33.3 depends on package: tiledb>=2.27.0 - found ===> Returning to build of py311-tiledb-0.33.3 ===> py311-tiledb-0.33.3 depends on file: /usr/local/bin/cmake - not found ===> Installing existing package /packages/All/cmake-core-3.31.6.pkg [141amd64-default-job-34] Installing cmake-core-3.31.6... [141amd64-default-job-34] `-- Installing expat-2.6.4... [141amd64-default-job-34] `-- Extracting expat-2.6.4: .......... done [141amd64-default-job-34] `-- Installing jsoncpp-1.9.6_1... [141amd64-default-job-34] `-- Extracting jsoncpp-1.9.6_1: .......... done [141amd64-default-job-34] `-- Installing libuv-1.50.0... [141amd64-default-job-34] `-- Extracting libuv-1.50.0: .......... done [141amd64-default-job-34] `-- Installing rhash-1.4.4_1... [141amd64-default-job-34] `-- Extracting rhash-1.4.4_1: .......... done [141amd64-default-job-34] Extracting cmake-core-3.31.6: .......... done ===> py311-tiledb-0.33.3 depends on file: /usr/local/bin/cmake - found ===> Returning to build of py311-tiledb-0.33.3 ===> py311-tiledb-0.33.3 depends on file: /usr/local/bin/python3.11 - found ===> py311-tiledb-0.33.3 depends on package: py311-build>=0 - not found ===> Installing existing package /packages/All/py311-build-1.2.2_2.pkg [141amd64-default-job-34] Installing py311-build-1.2.2_2... [141amd64-default-job-34] `-- Installing py311-pyproject-hooks-1.2.0... [141amd64-default-job-34] `-- Extracting py311-pyproject-hooks-1.2.0: .......... done [141amd64-default-job-34] Extracting py311-build-1.2.2_2: .......... done ===> py311-tiledb-0.33.3 depends on package: py311-build>=0 - found ===> Returning to build of py311-tiledb-0.33.3 ===> py311-tiledb-0.33.3 depends on package: py311-installer>=0 - not found ===> Installing existing package /packages/All/py311-installer-0.7.0.pkg [141amd64-default-job-34] Installing py311-installer-0.7.0... [141amd64-default-job-34] Extracting py311-installer-0.7.0: .......... done ===> py311-tiledb-0.33.3 depends on package: py311-installer>=0 - found ===> Returning to build of py311-tiledb-0.33.3 =========================================================================== =======================<phase: lib-depends >============================ ===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0 ===> py311-tiledb-0.33.3 depends on shared library: libtiledb.so - found (/usr/local/lib/libtiledb.so) =========================================================================== =======================<phase: configure >============================ ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Configuring for py311-tiledb-0.33.3 =========================================================================== =======================<phase: build >============================ ===== env: NO_DEPENDS=yes USER=root UID=0 GID=0 ===> Building for py311-tiledb-0.33.3 * Getting build dependencies for wheel... ERROR Missing dependencies: setuptools-scm setuptools *** Error code 1 Stop. make: stopped in /usr/ports/databases/py-tiledb