[package - 135releng-armv7-quarterly][biology/viennarna] Failed for viennarna-2.7.0_1 in build
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Date: Tue, 29 Jul 2025 14:21:36 UTC
You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.
Maintainer: yuri@FreeBSD.org
Log URL: https://pkg-status.freebsd.org/ampere1/data/135releng-armv7-quarterly/c80bf360039d/logs/viennarna-2.7.0_1.log
Build URL: https://pkg-status.freebsd.org/ampere1/build.html?mastername=135releng-armv7-quarterly&build=c80bf360039d
Log:
=>> Building biology/viennarna
build started at Tue Jul 29 14:14:48 UTC 2025
port directory: /usr/ports/biology/viennarna
package name: viennarna-2.7.0_1
building for: FreeBSD 135releng-armv7-quarterly-job-03 13.5-RELEASE-p2 FreeBSD 13.5-RELEASE-p2 1305000 arm
maintained by: yuri@FreeBSD.org
Makefile datestamp: -rw-r--r-- 1 root wheel 1947 Jul 3 01:02 /usr/ports/biology/viennarna/Makefile
Ports top last git commit: c80bf3600
Ports top unclean checkout: no
Port dir last git commit: d7951ee86
Port dir unclean checkout: no
Poudriere version: poudriere-git-3.4.2-12-g74a54a88
Host OSVERSION: 1500038
Jail OSVERSION: 1305000
Job Id: 03
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PORT_FLAGS=
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---End Poudriere Port Flags/Env---
---Begin OPTIONS List---
===> The following configuration options are available for viennarna-2.7.0_1:
DOCS=on: Build and/or install documentation
EXAMPLES=on: Build and/or install examples
===> Use 'make config' to modify these settings
---End OPTIONS List---
--MAINTAINER--
yuri@FreeBSD.org
--End MAINTAINER--
--CONFIGURE_ARGS--
--enable-shared --disable-static --with-gsl --with-cluster --with-kinwalker --enable-mpfr --without-python --without-python3 --without-perl --x-libraries=/usr/local/lib --x-includes=/usr/local/include --prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--
--CONFIGURE_ENV--
F77="gfortran13" F90="gfortran13" FC="gfortran13" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc13" F90FLAGS="-O -Wl,-rpath=/usr/local/lib/gcc13" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc13" MAKE=/usr/local/bin/gmake ac_cv_path_PERL=/usr/local/bin/perl ac_cv_path_PERL_PATH=/usr/local/bin/perl PERL_USE_UNSAFE_INC=1 PKG_CONFIG=pkgconf XDG_DATA_HOME=/wrkdirs/usr/ports/biology/viennarna/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/viennarna/work XDG_CACHE_HOME=/wrkdirs/usr/ports/biology/viennarna/work/.cache HOME=/wrkdirs/usr/ports/biology/viennarna/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/biology/viennarna/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/biology/viennarna/work/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig SHELL=/usr/local/bin/bash CONFIG_SHELL=/usr/local/bin/bash ADDR2LINE="/usr/local/bin/addr2line" AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPF
ILT="/usr/local/bin/c++filt" GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" DEFAULT_AUTOCONF=2.72 CMAKE_PREFIX_PATH="/usr/local" CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--
--MAKE_ENV--
F77="gfortran13" F90="gfortran13" FC="gfortran13" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc13" F90FLAGS="-O -Wl,-rpath=/usr/local/lib/gcc13" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc13" PERL_USE_UNSAFE_INC=1 XDG_DATA_HOME=/wrkdirs/usr/ports/biology/viennarna/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/viennarna/work XDG_CACHE_HOME=/wrkdirs/usr/ports/biology/viennarna/work/.cache HOME=/wrkdirs/usr/ports/biology/viennarna/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/biology/viennarna/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/biology/viennarna/work/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES ADDR2LINE="/usr/local/bin/addr2line" AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" OBJCOPY="/usr
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--End MAKE_ENV--
--PLIST_SUB--
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--End PLIST_SUB--
--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/viennarna DOCSDIR=/usr/local/share/doc/ViennaRNA EXAMPLESDIR=/usr/local/share/examples/ViennaRNA WWWDIR=/usr/local/www/viennarna ETCDIR=/usr/local/etc/viennarna
--End SUB_LIST--
---Begin make.conf---
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure. It currently retries the same
# failed mirror and then fails rather then trying another. It *does*
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PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
#### ####
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure. It currently retries the same
# failed mirror and then fails rather then trying another. It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 3 jobs
MAKE_JOBS_NUMBER=3
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GID=0
UID=0
---End make.conf---
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cpu time (seconds, -t) unlimited
file size (512-blocks, -f) unlimited
data seg size (kbytes, -d) 524288
stack size (kbytes, -s) 65536
core file size (512-blocks, -c) unlimited
max memory size (kbytes, -m) unlimited
locked memory (kbytes, -l) unlimited
max user processes (-u) 89999
open files (-n) 8192
virtual mem size (kbytes, -v) unlimited
swap limit (kbytes, -w) unlimited
socket buffer size (bytes, -b) unlimited
pseudo-terminals (-p) unlimited
kqueues (-k) unlimited
umtx shared locks (-o) unlimited
--End resource limits--
=======================<phase: check-sanity >============================
===== env: NO_DEPENDS=yes USER=root UID=0 GID=0
===> License ViennaRNALicense accepted by the user
===========================================================================
=======================<phase: pkg-depends >============================
===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0
===> viennarna-2.7.0_1 depends on file: /usr/local/sbin/pkg - not found
===> Installing existing package /packages/All/pkg-2.2.1.pkg
[135releng-armv7-quarterly-job-03] Installing pkg-2.2.1...
[135releng-armv7-quarterly-job-03] Extracting pkg-2.2.1: .......... done
===> viennarna-2.7.0_1 depends on file: /usr/local/sbin/pkg - found
===> Returning to build of viennarna-2.7.0_1
===========================================================================
=======================<phase: fetch-depends >============================
===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0
===========================================================================
=======================<phase: fetch >============================
===== env: NO_DEPENDS=yes USER=root UID=0 GID=0
===> License ViennaRNALicense accepted by the user
===> Fetching all distfiles required by viennarna-2.7.0_1 for building
===========================================================================
=======================<phase: checksum >============================
===== env: NO_DEPENDS=yes USER=root UID=0 GID=0
===> License ViennaRNALicense accepted by the user
===> Fetching all distfiles required by viennarna-2.7.0_1 for building
=> SHA256 Checksum OK for ViennaRNA-2.7.0.tar.gz.
===========================================================================
=======================<phase: extract-depends>============================
===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0
===========================================================================
=======================<phase: extract >============================
===== env: NO_DEPENDS=yes USER=root UID=0 GID=0
===> License ViennaRNALicense accepted by the user
===> Fetching all distfiles required by viennarna-2.7.0_1 for building
===> Extracting for viennarna-2.7.0_1
=> SHA256 Checksum OK for ViennaRNA-2.7.0.tar.gz.
===========================================================================
=======================<phase: patch-depends >============================
===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0
===========================================================================
=======================<phase: patch >============================
===== env: NO_DEPENDS=yes USER=root UID=0 GID=0
===> Patching for viennarna-2.7.0_1
===> Applying FreeBSD patches for viennarna-2.7.0_1 from /usr/ports/biology/viennarna/files
===========================================================================
=======================<phase: build-depends >============================
===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0
===> viennarna-2.7.0_1 depends on executable: bash - not found
===> Installing existing package /packages/All/bash-5.2.37.pkg
[135releng-armv7-quarterly-job-03] Installing bash-5.2.37...
[135releng-armv7-quarterly-job-03] `-- Installing gettext-runtime-0.23.1...
[135releng-armv7-quarterly-job-03] | `-- Installing indexinfo-0.3.1_1...
[135releng-armv7-quarterly-job-03] | `-- Extracting indexinfo-0.3.1_1: .... done
[135releng-armv7-quarterly-job-03] `-- Extracting gettext-runtime-0.23.1: .......... done
[135releng-armv7-quarterly-job-03] `-- Installing readline-8.2.13_2...
[135releng-armv7-quarterly-job-03] `-- Extracting readline-8.2.13_2: .......... done
[135releng-armv7-quarterly-job-03] Extracting bash-5.2.37: .......... done
===> viennarna-2.7.0_1 depends on executable: bash - found
===> Returning to build of viennarna-2.7.0_1
===> viennarna-2.7.0_1 depends on package: lapacke>0 - not found
===> Installing existing package /packages/All/lapacke-3.12.1.pkg
[135releng-armv7-quarterly-job-03] Installing lapacke-3.12.1...
<snip>
| ^
../dlib-19.24/dlib/all/../bigint/../unicode/unicode.h:509:18: note: in instantiation of member function 'std::basic_string<unsigned int>::push_back' requested here
509 | temp.push_back(ch);
| ^
/usr/include/c++/v1/__fwd/string.h:23:29: note: template is declared here
23 | struct _LIBCPP_TEMPLATE_VIS char_traits;
| ^
In file included from ../dlib-19.24/dlib/all/source.cpp:11:
In file included from ../dlib-19.24/dlib/all/../base64/base64_kernel_1.cpp:6:
In file included from ../dlib-19.24/dlib/all/../base64/base64_kernel_1.h:6:
In file included from ../dlib-19.24/dlib/all/../base64/../algs.h:97:
/usr/include/c++/v1/string:2912:3: error: implicit instantiation of undefined template 'std::char_traits<unsigned int>'
2912 | traits_type::assign(*++__p, value_type());
| ^
/usr/include/c++/v1/__fwd/string.h:23:29: note: template is declared here
23 | struct _LIBCPP_TEMPLATE_VIS char_traits;
| ^
In file included from ../dlib-19.24/dlib/all/source.cpp:11:
In file included from ../dlib-19.24/dlib/all/../base64/base64_kernel_1.cpp:6:
In file included from ../dlib-19.24/dlib/all/../base64/base64_kernel_1.h:6:
In file included from ../dlib-19.24/dlib/all/../base64/../algs.h:97:
/usr/include/c++/v1/string:2535:5: error: implicit instantiation of undefined template 'std::char_traits<unsigned int>'
2535 | traits_type::copy(std::__to_address(__p), std::__to_address(__old_p), __n_copy);
| ^
/usr/include/c++/v1/string:2556:3: note: in instantiation of member function 'std::basic_string<unsigned int>::__grow_by' requested here
2556 | __grow_by(__old_cap, __delta_cap, __old_sz, __n_copy, __n_del, __n_add);
| ^
/usr/include/c++/v1/string:2898:5: note: in instantiation of member function 'std::basic_string<unsigned int>::__grow_by_without_replace' requested here
2898 | __grow_by_without_replace(__cap, 1, __sz, __sz, 0);
| ^
../dlib-19.24/dlib/all/../bigint/../unicode/unicode.h:509:18: note: in instantiation of member function 'std::basic_string<unsigned int>::push_back' requested here
509 | temp.push_back(ch);
| ^
/usr/include/c++/v1/__fwd/string.h:23:29: note: template is declared here
23 | struct _LIBCPP_TEMPLATE_VIS char_traits;
| ^
In file included from ../dlib-19.24/dlib/all/source.cpp:11:
In file included from ../dlib-19.24/dlib/all/../base64/base64_kernel_1.cpp:6:
In file included from ../dlib-19.24/dlib/all/../base64/base64_kernel_1.h:6:
In file included from ../dlib-19.24/dlib/all/../base64/../algs.h:97:
/usr/include/c++/v1/string:2538:5: error: implicit instantiation of undefined template 'std::char_traits<unsigned int>'
2538 | traits_type::copy(
| ^
/usr/include/c++/v1/__fwd/string.h:23:29: note: template is declared here
23 | struct _LIBCPP_TEMPLATE_VIS char_traits;
| ^
In file included from ../dlib-19.24/dlib/all/source.cpp:11:
In file included from ../dlib-19.24/dlib/all/../base64/base64_kernel_1.cpp:6:
In file included from ../dlib-19.24/dlib/all/../base64/base64_kernel_1.h:6:
In file included from ../dlib-19.24/dlib/all/../base64/../algs.h:97:
/usr/include/c++/v1/string:2861:5: error: implicit instantiation of undefined template 'std::char_traits<unsigned int>'
2861 | traits_type::assign(std::__to_address(__p) + __sz, __n, __c);
| ^
/usr/include/c++/v1/string:3302:5: note: in instantiation of member function 'std::basic_string<unsigned int>::append' requested here
3302 | append(__n - __sz, __c);
| ^
/usr/include/c++/v1/string:1303:84: note: in instantiation of member function 'std::basic_string<unsigned int>::resize' requested here
1303 | _LIBCPP_HIDE_FROM_ABI _LIBCPP_CONSTEXPR_SINCE_CXX20 void resize(size_type __n) { resize(__n, value_type()); }
| ^
../dlib-19.24/dlib/all/../bigint/../serialize.h:2011:14: note: in instantiation of member function 'std::basic_string<unsigned int>::resize' requested here
2011 | item.resize(size);
| ^
/usr/include/c++/v1/__fwd/string.h:23:29: note: template is declared here
23 | struct _LIBCPP_TEMPLATE_VIS char_traits;
| ^
In file included from ../dlib-19.24/dlib/all/source.cpp:11:
In file included from ../dlib-19.24/dlib/all/../base64/base64_kernel_1.cpp:6:
In file included from ../dlib-19.24/dlib/all/../base64/base64_kernel_1.h:6:
In file included from ../dlib-19.24/dlib/all/../base64/../algs.h:97:
/usr/include/c++/v1/string:2864:5: error: implicit instantiation of undefined template 'std::char_traits<unsigned int>'
2864 | traits_type::assign(__p[__sz], value_type());
| ^
/usr/include/c++/v1/__fwd/string.h:23:29: note: template is declared here
23 | struct _LIBCPP_TEMPLATE_VIS char_traits;
| ^
In file included from ../dlib-19.24/dlib/all/source.cpp:11:
In file included from ../dlib-19.24/dlib/all/../base64/base64_kernel_1.cpp:6:
In file included from ../dlib-19.24/dlib/all/../base64/base64_kernel_1.h:6:
In file included from ../dlib-19.24/dlib/all/../base64/../algs.h:97:
/usr/include/c++/v1/string:2221:5: error: implicit instantiation of undefined template 'std::char_traits<unsigned int>'
2221 | traits_type::assign(__p[__newsz], value_type());
| ^
/usr/include/c++/v1/string:2134:5: note: in instantiation of member function 'std::basic_string<unsigned int>::__null_terminate_at' requested here
2134 | __null_terminate_at(std::__to_address(__get_pointer()), __pos);
| ^
/usr/include/c++/v1/string:3304:5: note: in instantiation of member function 'std::basic_string<unsigned int>::__erase_to_end' requested here
3304 | __erase_to_end(__n);
| ^
/usr/include/c++/v1/string:1303:84: note: in instantiation of member function 'std::basic_string<unsigned int>::resize' requested here
1303 | _LIBCPP_HIDE_FROM_ABI _LIBCPP_CONSTEXPR_SINCE_CXX20 void resize(size_type __n) { resize(__n, value_type()); }
| ^
../dlib-19.24/dlib/all/../bigint/../serialize.h:2011:14: note: in instantiation of member function 'std::basic_string<unsigned int>::resize' requested here
2011 | item.resize(size);
| ^
/usr/include/c++/v1/__fwd/string.h:23:29: note: template is declared here
23 | struct _LIBCPP_TEMPLATE_VIS char_traits;
| ^
In file included from ../dlib-19.24/dlib/all/source.cpp:11:
In file included from ../dlib-19.24/dlib/all/../base64/base64_kernel_1.cpp:6:
In file included from ../dlib-19.24/dlib/all/../base64/base64_kernel_1.h:6:
In file included from ../dlib-19.24/dlib/all/../base64/../algs.h:97:
/usr/include/c++/v1/string:2825:29: error: implicit instantiation of undefined template 'std::char_traits<unsigned int>'
2825 | ? (__fits_in_sso(traits_type::length(__s)) ? __assign_short(__s, traits_type::length(__s))
| ^
../dlib-19.24/dlib/all/../unicode/unicode.cpp:54:14: note: in instantiation of member function 'std::basic_string<unsigned int>::assign' requested here
54 | dest.assign((const unichar *)(src));
| ^
/usr/include/c++/v1/__fwd/string.h:23:29: note: template is declared here
23 | struct _LIBCPP_TEMPLATE_VIS char_traits;
| ^
In file included from ../dlib-19.24/dlib/all/source.cpp:11:
In file included from ../dlib-19.24/dlib/all/../base64/base64_kernel_1.cpp:6:
In file included from ../dlib-19.24/dlib/all/../base64/base64_kernel_1.h:6:
In file included from ../dlib-19.24/dlib/all/../base64/../algs.h:97:
/usr/include/c++/v1/string:2825:77: error: implicit instantiation of undefined template 'std::char_traits<unsigned int>'
2825 | ? (__fits_in_sso(traits_type::length(__s)) ? __assign_short(__s, traits_type::length(__s))
| ^
/usr/include/c++/v1/__fwd/string.h:23:29: note: template is declared here
23 | struct _LIBCPP_TEMPLATE_VIS char_traits;
| ^
In file included from ../dlib-19.24/dlib/all/source.cpp:11:
In file included from ../dlib-19.24/dlib/all/../base64/base64_kernel_1.cpp:6:
In file included from ../dlib-19.24/dlib/all/../base64/base64_kernel_1.h:6:
In file included from ../dlib-19.24/dlib/all/../base64/../algs.h:97:
/usr/include/c++/v1/string:2826:80: error: implicit instantiation of undefined template 'std::char_traits<unsigned int>'
2826 | : __assign_external(__s, traits_type::length(__s)))
| ^
/usr/include/c++/v1/__fwd/string.h:23:29: note: template is declared here
23 | struct _LIBCPP_TEMPLATE_VIS char_traits;
| ^
In file included from ../dlib-19.24/dlib/all/source.cpp:11:
In file included from ../dlib-19.24/dlib/all/../base64/base64_kernel_1.cpp:6:
In file included from ../dlib-19.24/dlib/all/../base64/base64_kernel_1.h:6:
In file included from ../dlib-19.24/dlib/all/../base64/../algs.h:97:
/usr/include/c++/v1/string:2208:5: error: implicit instantiation of undefined template 'std::char_traits<unsigned int>'
2208 | traits_type::move(std::__to_address(__p), __s, __n);
| ^
/usr/include/c++/v1/string:2825:57: note: in instantiation of member function 'std::basic_string<unsigned int>::__assign_short' requested here
2825 | ? (__fits_in_sso(traits_type::length(__s)) ? __assign_short(__s, traits_type::length(__s))
| ^
../dlib-19.24/dlib/all/../unicode/unicode.cpp:54:14: note: in instantiation of member function 'std::basic_string<unsigned int>::assign' requested here
54 | dest.assign((const unichar *)(src));
| ^
/usr/include/c++/v1/__fwd/string.h:23:29: note: template is declared here
23 | struct _LIBCPP_TEMPLATE_VIS char_traits;
| ^
In file included from ../dlib-19.24/dlib/all/source.cpp:11:
In file included from ../dlib-19.24/dlib/all/../base64/base64_kernel_1.cpp:6:
In file included from ../dlib-19.24/dlib/all/../base64/base64_kernel_1.h:6:
In file included from ../dlib-19.24/dlib/all/../base64/../algs.h:97:
/usr/include/c++/v1/string:2209:5: error: implicit instantiation of undefined template 'std::char_traits<unsigned int>'
2209 | traits_type::assign(__p[__n], value_type());
| ^
/usr/include/c++/v1/__fwd/string.h:23:29: note: template is declared here
23 | struct _LIBCPP_TEMPLATE_VIS char_traits;
| ^
In file included from ../dlib-19.24/dlib/all/source.cpp:11:
In file included from ../dlib-19.24/dlib/all/../base64/base64_kernel_1.cpp:6:
In file included from ../dlib-19.24/dlib/all/../base64/base64_kernel_1.h:6:
In file included from ../dlib-19.24/dlib/all/../base64/../algs.h:97:
/usr/include/c++/v1/string:2817:33: error: implicit instantiation of undefined template 'std::char_traits<unsigned int>'
2817 | return __assign_external(__s, traits_type::length(__s));
| ^
/usr/include/c++/v1/string:2827:14: note: in instantiation of member function 'std::basic_string<unsigned int>::__assign_external' requested here
2827 | : __assign_external(__s);
| ^
../dlib-19.24/dlib/all/../unicode/unicode.cpp:54:14: note: in instantiation of member function 'std::basic_string<unsigned int>::assign' requested here
54 | dest.assign((const unichar *)(src));
| ^
/usr/include/c++/v1/__fwd/string.h:23:29: note: template is declared here
23 | struct _LIBCPP_TEMPLATE_VIS char_traits;
| ^
In file included from ../dlib-19.24/dlib/all/source.cpp:82:
In file included from ../dlib-19.24/dlib/all/../cuda/cpu_dlib.cpp:8:
In file included from ../dlib-19.24/dlib/all/../cuda/cpu_dlib.h:9:
In file included from ../dlib-19.24/dlib/all/../cuda/tensor.h:8:
In file included from ../dlib-19.24/dlib/all/../cuda/../matrix.h:6:
../dlib-19.24/dlib/all/../cuda/../matrix/matrix.h:1153:47: warning: division by zero is undefined [-Wdivision-by-zero]
1153 | data.set_size(NR, l.size()/NR);
| ^~~
../dlib-19.24/dlib/all/../svm/auto.cpp:78:13: note: in instantiation of member function 'dlib::matrix<double, 0, 1>::matrix' requested here
78 | {1e-5, 1e-5, 1e-5}, // lower bound constraints on gamma, c1, and c2, respectively
| ^
1 warning and 17 errors generated.
gmake[4]: *** [Makefile:2588: ../dlib-19.24/dlib/all/libRNA_concentrations_la-source.lo] Error 1
gmake[4]: Leaving directory '/wrkdirs/usr/ports/biology/viennarna/work/ViennaRNA-2.7.0/src/ViennaRNA'
gmake[3]: *** [Makefile:3218: all-recursive] Error 1
gmake[3]: Leaving directory '/wrkdirs/usr/ports/biology/viennarna/work/ViennaRNA-2.7.0/src/ViennaRNA'
gmake[2]: *** [Makefile:566: all-recursive] Error 1
gmake[2]: Leaving directory '/wrkdirs/usr/ports/biology/viennarna/work/ViennaRNA-2.7.0/src'
gmake[1]: *** [Makefile:746: all-recursive] Error 1
gmake[1]: Leaving directory '/wrkdirs/usr/ports/biology/viennarna/work/ViennaRNA-2.7.0'
gmake: *** [Makefile:627: all] Error 2
===> Compilation failed unexpectedly.
Try to set MAKE_JOBS_UNSAFE=yes and rebuild before reporting the failure to
the maintainer.
*** Error code 1
Stop.
make: stopped in /usr/ports/biology/viennarna