[package - main-arm64-default][science/sirius] Failed for sirius-quantum-chemistry-7.9.0 in build
- Go to: [ bottom of page ] [ top of archives ] [ this month ]
Date: Wed, 17 Dec 2025 20:51:59 UTC
You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.
Maintainer: yuri@FreeBSD.org
Log URL: https://pkg-status.freebsd.org/ampere2/data/main-arm64-default/p629d9fe83024_s72ca89482af/logs/sirius-quantum-chemistry-7.9.0.log
Build URL: https://pkg-status.freebsd.org/ampere2/build.html?mastername=main-arm64-default&build=p629d9fe83024_s72ca89482af
Log:
=>> Building science/sirius
build started at Wed Dec 17 20:48:44 -00 2025
port directory: /usr/ports/science/sirius
package name: sirius-quantum-chemistry-7.9.0
building for: FreeBSD main-arm64-default-job-12 16.0-CURRENT FreeBSD 16.0-CURRENT 1600004 arm64
maintained by: yuri@FreeBSD.org
Makefile datestamp: -rw-r--r-- 1 root wheel 1460 Nov 15 01:04 /usr/ports/science/sirius/Makefile
Ports top last git commit: 629d9fe83024d5fc33b67d7adaddc9be3b346ede
Ports top unclean checkout: no
Port dir last git commit: e9e62416e98d3fff2e25c4e7dc7eb813920b9644
Port dir unclean checkout: no
Poudriere version: poudriere-git-3.4.4-7-gd0e6e138
Host OSVERSION: 1600000
Jail OSVERSION: 1600004
Job Id: 12
!!! Jail is newer than host. (Jail: 1600004, Host: 1600000) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!
---Begin Environment---
SHELL=/bin/sh
OSVERSION=1600004
UNAME_v=FreeBSD 16.0-CURRENT 1600004
UNAME_r=16.0-CURRENT
BLOCKSIZE=K
MAIL=/var/mail/root
MM_CHARSET=UTF-8
LANG=C.UTF-8
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
MAKE_OBJDIR_CHECK_WRITABLE=0
LOCALBASE=/usr/local
USER=root
POUDRIERE_NAME=poudriere-git
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.4.4-7-gd0e6e138
MASTERMNT=/usr/local/poudriere/data/.m/main-arm64-default/ref
LC_COLLATE=C
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
OUTPUT_REDIRECTED_STDERR=4
OUTPUT_REDIRECTED=1
PWD=/usr/local/poudriere/data/.m/main-arm64-default/12/.p
OUTPUT_REDIRECTED_STDOUT=3
P_PORTS_FEATURES=FLAVORS SUBPACKAGES SELECTED_OPTIONS
MASTERNAME=main-arm64-default
SCRIPTPREFIX=/usr/local/share/poudriere
SCRIPTNAME=bulk.sh
OLDPWD=/usr/local/poudriere/data/.m/main-arm64-default/ref/.p/pool
POUDRIERE_PKGNAME=poudriere-git-3.4.4-7-gd0e6e138
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---
---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
MAKE_ARGS=
---End Poudriere Port Flags/Env---
---Begin OPTIONS List---
===> The following configuration options are available for sirius-quantum-chemistry-7.9.0:
NLCGLIB=off: Enable nlcglib
====> MPI (Message Passing Interface) support: you have to select exactly one of them
MPICH=on: Parallel processing support via MPICH
OPENMPI=off: Parallel processing support via Open MPI
===> Use 'make config' to modify these settings
---End OPTIONS List---
--MAINTAINER--
yuri@FreeBSD.org
--End MAINTAINER--
--CONFIGURE_ARGS--
--End CONFIGURE_ARGS--
--CONFIGURE_ENV--
F77="gfortran13" F90="gfortran13" FC="gfortran13" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc13" F90FLAGS="-O -Wl,-rpath=/usr/local/lib/gcc13" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc13" PKG_CONFIG=pkgconf XDG_DATA_HOME=/wrkdirs/usr/ports/science/sirius/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/sirius/work XDG_CACHE_HOME=/wrkdirs/usr/ports/science/sirius/work/.cache HOME=/wrkdirs/usr/ports/science/sirius/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/sirius/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/science/sirius/work/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--
--MAKE_ENV--
F77="gfortran13" F90="gfortran13" FC="gfortran13" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc13" F90FLAGS="-O -Wl,-rpath=/usr/local/lib/gcc13" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc13" XDG_DATA_HOME=/wrkdirs/usr/ports/science/sirius/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/sirius/work XDG_CACHE_HOME=/wrkdirs/usr/ports/science/sirius/work/.cache HOME=/wrkdirs/usr/ports/science/sirius/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/sirius/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/science/sirius/work/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES ADDR2LINE="/usr/local/bin/addr2line" AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/
bin/objdump" RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" PREFIX=/usr/local LOCALBASE=/usr/local CC="cc" CFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " CPP="cpp" CPPFLAGS="" LDFLAGS=" -Wl,-rpath=/usr/local/lib/gcc13 -L/usr/local/lib/gcc13 " LIBS="" CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444"
--End MAKE_ENV--
--PLIST_SUB--
CMAKE_BUILD_TYPE="release" OSREL=16.0 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/sirius" EXAMPLESDIR="share/examples/sirius" DATADIR="share/sirius" WWWDIR="www/sirius" ETCDIR="etc/sirius"
--End PLIST_SUB--
--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/sirius DOCSDIR=/usr/local/share/doc/sirius EXAMPLESDIR=/usr/local/share/examples/sirius WWWDIR=/usr/local/www/sirius ETCDIR=/usr/local/etc/sirius
--End SUB_LIST--
---Begin make.conf---
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure. It currently retries the same
# failed mirror and then fails rather then trying another. It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 3 jobs
MAKE_JOBS_NUMBER=3
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
#### ####
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure. It currently retries the same
# failed mirror and then fails rather then trying another. It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 3 jobs
MAKE_JOBS_NUMBER=3
#### Misc Poudriere ####
.include "/etc/make.conf.ports_env"
GID=0
UID=0
---End make.conf---
--Resource limits--
cpu time (seconds, -t) unlimited
file size (512-blocks, -f) unlimited
data seg size (kbytes, -d) 1048576
stack size (kbytes, -s) 1048576
core file size (512-blocks, -c) unlimited
max memory size (kbytes, -m) unlimited
locked memory (kbytes, -l) unlimited
max user processes (-u) 89999
open files (-n) 8192
virtual mem size (kbytes, -v) unlimited
swap limit (kbytes, -w) unlimited
socket buffer size (bytes, -b) unlimited
pseudo-terminals (-p) unlimited
kqueues (-k) unlimited
umtx shared locks (-o) unlimited
pipebuf (-y) unlimited
--End resource limits--
=======================<phase: check-sanity >============================
===== env: NO_DEPENDS=yes USER=root UID=0 GID=0
===> License BSD3CLAUSE accepted by the user
===========================================================================
=======================<phase: pkg-depends >============================
===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0
===> sirius-quantum-chemistry-7.9.0 depends on file: /usr/local/sbin/pkg - not found
===> Installing existing package /packages/All/pkg-2.4.2_1.pkg
[main-arm64-default-job-12] Installing pkg-2.4.2_1...
[main-arm64-default-job-12] Extracting pkg-2.4.2_1: .......... done
===> sirius-quantum-chemistry-7.9.0 depends on file: /usr/local/sbin/pkg - found
===> Returning to build of sirius-quantum-chemistry-7.9.0
===========================================================================
=======================<phase: fetch-depends >============================
===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0
===========================================================================
=======================<phase: fetch >============================
===== env: NO_DEPENDS=yes USER=root UID=0 GID=0
===> License BSD3CLAUSE accepted by the user
===> Fetching all distfiles required by sirius-quantum-chemistry-7.9.0 for building
===========================================================================
=======================<phase: checksum >============================
===== env: NO_DEPENDS=yes USER=root UID=0 GID=0
===> License BSD3CLAUSE accepted by the user
===> Fetching all distfiles required by sirius-quantum-chemistry-7.9.0 for building
=> SHA256 Checksum OK for electronic-structure-SIRIUS-v7.9.0_GH0.tar.gz.
===========================================================================
=======================<phase: extract-depends>============================
===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0
===========================================================================
=======================<phase: extract >============================
===== env: NO_DEPENDS=yes USER=root UID=0 GID=0
===> License BSD3CLAUSE accepted by the user
===> Fetching all distfiles required by sirius-quantum-chemistry-7.9.0 for building
===> Extracting for sirius-quantum-chemistry-7.9.0
=> SHA256 Checksum OK for electronic-structure-SIRIUS-v7.9.0_GH0.tar.gz.
===========================================================================
=======================<phase: patch-depends >============================
===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0
===========================================================================
=======================<phase: patch >============================
===== env: NO_DEPENDS=yes USER=root UID=0 GID=0
===> Patching for sirius-quantum-chemistry-7.9.0
===========================================================================
=======================<phase: build-depends >============================
===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0
===> sirius-quantum-chemistry-7.9.0 depends on file: /usr/local/bin/cmake - not found
===> Installing existing package /packages/All/cmake-core-3.31.9.pkg
[main-arm64-default-job-12] Installing cmake-core-3.31.9...
<snip>
[ 2%] Building CXX object src/CMakeFiles/sirius_cxx.dir/hamiltonian/hamiltonian_k.cpp.o
cd /wrkdirs/usr/ports/science/sirius/work/.build/src && /usr/bin/c++ -DFMT_SHARED -DH5_BUILT_AS_DYNAMIC_LIB -DSIRIUS_GPU_MEMORY_ALIGMENT="" -DSIRIUS_PROFILE -Dsirius_cxx_EXPORTS -I/wrkdirs/usr/ports/science/sirius/work/SIRIUS-7.9.0/src -I/wrkdirs/usr/ports/science/sirius/work/.build/src -isystem /usr/local/include -isystem /usr/local/include/spfft -isystem /usr/local/include/json-c -isystem /usr/local/include/gcc13 -isystem /usr/local/include/spla -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wall -O3 -DNDEBUG -std=gnu++20 -fPIC -fopenmp=libomp -MD -MT src/CMakeFiles/sirius_cxx.dir/hamiltonian/hamiltonian_k.cpp.o -MF CMakeFiles/sirius_cxx.dir/hamiltonian/hamiltonian_k.cpp.o.d -o CMakeFiles/sirius_cxx.dir/hamiltonian/hamiltonian_k.cpp.o -c /wrkdirs/usr/ports/science/sirius/work/SIRIUS-7.9.0/src/hamiltonian/hamiltonian_k.cpp
--- src/CMakeFiles/sirius_cxx.dir/hamiltonian/local_operator.cpp.o ---
[ 4%] Building CXX object src/CMakeFiles/sirius_cxx.dir/hamiltonian/local_operator.cpp.o
cd /wrkdirs/usr/ports/science/sirius/work/.build/src && /usr/bin/c++ -DFMT_SHARED -DH5_BUILT_AS_DYNAMIC_LIB -DSIRIUS_GPU_MEMORY_ALIGMENT="" -DSIRIUS_PROFILE -Dsirius_cxx_EXPORTS -I/wrkdirs/usr/ports/science/sirius/work/SIRIUS-7.9.0/src -I/wrkdirs/usr/ports/science/sirius/work/.build/src -isystem /usr/local/include -isystem /usr/local/include/spfft -isystem /usr/local/include/json-c -isystem /usr/local/include/gcc13 -isystem /usr/local/include/spla -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wall -O3 -DNDEBUG -std=gnu++20 -fPIC -fopenmp=libomp -MD -MT src/CMakeFiles/sirius_cxx.dir/hamiltonian/local_operator.cpp.o -MF CMakeFiles/sirius_cxx.dir/hamiltonian/local_operator.cpp.o.d -o CMakeFiles/sirius_cxx.dir/hamiltonian/local_operator.cpp.o -c /wrkdirs/usr/ports/science/sirius/work/SIRIUS-7.9.0/src/hamiltonian/local_operator.cpp
--- src/CMakeFiles/sirius_cxx.dir/hamiltonian/hamiltonian_k.cpp.o ---
In file included from /wrkdirs/usr/ports/science/sirius/work/SIRIUS-7.9.0/src/hamiltonian/hamiltonian_k.cpp:14:
In file included from /wrkdirs/usr/ports/science/sirius/work/SIRIUS-7.9.0/src/context/simulation_context.hpp:28:
In file included from /wrkdirs/usr/ports/science/sirius/work/SIRIUS-7.9.0/src/radial/radial_integrals.hpp:17:
In file included from /wrkdirs/usr/ports/science/sirius/work/SIRIUS-7.9.0/src/unit_cell/unit_cell.hpp:19:
In file included from /wrkdirs/usr/ports/science/sirius/work/SIRIUS-7.9.0/src/unit_cell/atom.hpp:19:
In file included from /wrkdirs/usr/ports/science/sirius/work/SIRIUS-7.9.0/src/unit_cell/atom_symmetry_class.hpp:17:
In file included from /wrkdirs/usr/ports/science/sirius/work/SIRIUS-7.9.0/src/unit_cell/atom_type.hpp:18:
/wrkdirs/usr/ports/science/sirius/work/SIRIUS-7.9.0/src/radial/radial_solver.hpp:1295:50: warning: lambda capture 'this' is not used [-Wunused-lambda-capture]
1295 | [this, &denu, sd, &surface_deriv, &p](int iter, int nn, double& enu) {
| ^~~~~
/wrkdirs/usr/ports/science/sirius/work/SIRIUS-7.9.0/src/radial/radial_solver.hpp:1295:84: warning: lambda capture 'p' is not used [-Wunused-lambda-capture]
1295 | [this, &denu, sd, &surface_deriv, &p](int iter, int nn, double& enu) {
| ~~~^
/wrkdirs/usr/ports/science/sirius/work/SIRIUS-7.9.0/src/radial/radial_solver.hpp:1309:46: warning: lambda capture 'this' is not used [-Wunused-lambda-capture]
1309 | [this, &e1, &e2, sd, &surface_deriv](int iter, int nn, double& enu) {
| ^~~~~
In file included from /wrkdirs/usr/ports/science/sirius/work/SIRIUS-7.9.0/src/hamiltonian/hamiltonian_k.cpp:14:
In file included from /wrkdirs/usr/ports/science/sirius/work/SIRIUS-7.9.0/src/context/simulation_context.hpp:28:
In file included from /wrkdirs/usr/ports/science/sirius/work/SIRIUS-7.9.0/src/radial/radial_integrals.hpp:17:
In file included from /wrkdirs/usr/ports/science/sirius/work/SIRIUS-7.9.0/src/unit_cell/unit_cell.hpp:19:
In file included from /wrkdirs/usr/ports/science/sirius/work/SIRIUS-7.9.0/src/unit_cell/atom.hpp:19:
In file included from /wrkdirs/usr/ports/science/sirius/work/SIRIUS-7.9.0/src/unit_cell/atom_symmetry_class.hpp:17:
In file included from /wrkdirs/usr/ports/science/sirius/work/SIRIUS-7.9.0/src/unit_cell/atom_type.hpp:22:
In file included from /wrkdirs/usr/ports/science/sirius/work/SIRIUS-7.9.0/src/unit_cell/hubbard_orbitals_descriptor.hpp:17:
In file included from /wrkdirs/usr/ports/science/sirius/work/SIRIUS-7.9.0/src/core/sht/sht.hpp:29:
In file included from /wrkdirs/usr/ports/science/sirius/work/SIRIUS-7.9.0/src/core/la/linalg.hpp:32:
In file included from /wrkdirs/usr/ports/science/sirius/work/SIRIUS-7.9.0/src/core/la/dmatrix.hpp:23:
/wrkdirs/usr/ports/science/sirius/work/SIRIUS-7.9.0/src/core/hdf5_tree.hpp:396:22: warning: variable length arrays in C++ are a Clang extension [-Wvla-cxx-extension]
396 | hsize_t dims[ndims];
| ^~~~~
/wrkdirs/usr/ports/science/sirius/work/SIRIUS-7.9.0/src/core/hdf5_tree.hpp:396:22: note: read of non-const variable 'ndims' is not allowed in a constant expression
/wrkdirs/usr/ports/science/sirius/work/SIRIUS-7.9.0/src/core/hdf5_tree.hpp:390:13: note: declared here
390 | int ndims = H5Sget_simple_extent_ndims(dataspace_id);
| ^
--- src/CMakeFiles/sirius_cxx.dir/hamiltonian/local_operator.cpp.o ---
In file included from /wrkdirs/usr/ports/science/sirius/work/SIRIUS-7.9.0/src/hamiltonian/local_operator.cpp:15:
In file included from /wrkdirs/usr/ports/science/sirius/work/SIRIUS-7.9.0/src/potential/potential.hpp:17:
In file included from /wrkdirs/usr/ports/science/sirius/work/SIRIUS-7.9.0/src/density/density.hpp:18:
In file included from /wrkdirs/usr/ports/science/sirius/work/SIRIUS-7.9.0/src/function3d/field4d.hpp:21:
In file included from /wrkdirs/usr/ports/science/sirius/work/SIRIUS-7.9.0/src/function3d/periodic_function.hpp:17:
In file included from /wrkdirs/usr/ports/science/sirius/work/SIRIUS-7.9.0/src/context/simulation_context.hpp:28:
In file included from /wrkdirs/usr/ports/science/sirius/work/SIRIUS-7.9.0/src/radial/radial_integrals.hpp:17:
In file included from /wrkdirs/usr/ports/science/sirius/work/SIRIUS-7.9.0/src/unit_cell/unit_cell.hpp:19:
In file included from /wrkdirs/usr/ports/science/sirius/work/SIRIUS-7.9.0/src/unit_cell/atom.hpp:19:
In file included from /wrkdirs/usr/ports/science/sirius/work/SIRIUS-7.9.0/src/unit_cell/atom_symmetry_class.hpp:17:
In file included from /wrkdirs/usr/ports/science/sirius/work/SIRIUS-7.9.0/src/unit_cell/atom_type.hpp:18:
/wrkdirs/usr/ports/science/sirius/work/SIRIUS-7.9.0/src/radial/radial_solver.hpp:1295:50: warning: lambda capture 'this' is not used [-Wunused-lambda-capture]
1295 | [this, &denu, sd, &surface_deriv, &p](int iter, int nn, double& enu) {
| ^~~~~
/wrkdirs/usr/ports/science/sirius/work/SIRIUS-7.9.0/src/radial/radial_solver.hpp:1295:84: warning: lambda capture 'p' is not used [-Wunused-lambda-capture]
1295 | [this, &denu, sd, &surface_deriv, &p](int iter, int nn, double& enu) {
| ~~~^
/wrkdirs/usr/ports/science/sirius/work/SIRIUS-7.9.0/src/radial/radial_solver.hpp:1309:46: warning: lambda capture 'this' is not used [-Wunused-lambda-capture]
1309 | [this, &e1, &e2, sd, &surface_deriv](int iter, int nn, double& enu) {
| ^~~~~
--- src/CMakeFiles/sirius_cxx.dir/hamiltonian/hamiltonian.cpp.o ---
In file included from /wrkdirs/usr/ports/science/sirius/work/SIRIUS-7.9.0/src/hamiltonian/hamiltonian.cpp:14:
In file included from /wrkdirs/usr/ports/science/sirius/work/SIRIUS-7.9.0/src/potential/potential.hpp:17:
In file included from /wrkdirs/usr/ports/science/sirius/work/SIRIUS-7.9.0/src/density/density.hpp:18:
In file included from /wrkdirs/usr/ports/science/sirius/work/SIRIUS-7.9.0/src/function3d/field4d.hpp:21:
In file included from /wrkdirs/usr/ports/science/sirius/work/SIRIUS-7.9.0/src/function3d/periodic_function.hpp:17:
In file included from /wrkdirs/usr/ports/science/sirius/work/SIRIUS-7.9.0/src/context/simulation_context.hpp:28:
In file included from /wrkdirs/usr/ports/science/sirius/work/SIRIUS-7.9.0/src/radial/radial_integrals.hpp:17:
In file included from /wrkdirs/usr/ports/science/sirius/work/SIRIUS-7.9.0/src/unit_cell/unit_cell.hpp:19:
In file included from /wrkdirs/usr/ports/science/sirius/work/SIRIUS-7.9.0/src/unit_cell/atom.hpp:19:
In file included from /wrkdirs/usr/ports/science/sirius/work/SIRIUS-7.9.0/src/unit_cell/atom_symmetry_class.hpp:17:
In file included from /wrkdirs/usr/ports/science/sirius/work/SIRIUS-7.9.0/src/unit_cell/atom_type.hpp:18:
/wrkdirs/usr/ports/science/sirius/work/SIRIUS-7.9.0/src/radial/radial_solver.hpp:1295:50: warning: lambda capture 'this' is not used [-Wunused-lambda-capture]
1295 | [this, &denu, sd, &surface_deriv, &p](int iter, int nn, double& enu) {
| ^~~~~
/wrkdirs/usr/ports/science/sirius/work/SIRIUS-7.9.0/src/radial/radial_solver.hpp:1295:84: warning: lambda capture 'p' is not used [-Wunused-lambda-capture]
1295 | [this, &denu, sd, &surface_deriv, &p](int iter, int nn, double& enu) {
| ~~~^
/wrkdirs/usr/ports/science/sirius/work/SIRIUS-7.9.0/src/radial/radial_solver.hpp:1309:46: warning: lambda capture 'this' is not used [-Wunused-lambda-capture]
1309 | [this, &e1, &e2, sd, &surface_deriv](int iter, int nn, double& enu) {
| ^~~~~
In file included from /wrkdirs/usr/ports/science/sirius/work/SIRIUS-7.9.0/src/hamiltonian/hamiltonian.cpp:14:
In file included from /wrkdirs/usr/ports/science/sirius/work/SIRIUS-7.9.0/src/potential/potential.hpp:17:
In file included from /wrkdirs/usr/ports/science/sirius/work/SIRIUS-7.9.0/src/density/density.hpp:18:
In file included from /wrkdirs/usr/ports/science/sirius/work/SIRIUS-7.9.0/src/function3d/field4d.hpp:21:
In file included from /wrkdirs/usr/ports/science/sirius/work/SIRIUS-7.9.0/src/function3d/periodic_function.hpp:17:
In file included from /wrkdirs/usr/ports/science/sirius/work/SIRIUS-7.9.0/src/context/simulation_context.hpp:28:
In file included from /wrkdirs/usr/ports/science/sirius/work/SIRIUS-7.9.0/src/radial/radial_integrals.hpp:17:
In file included from /wrkdirs/usr/ports/science/sirius/work/SIRIUS-7.9.0/src/unit_cell/unit_cell.hpp:19:
In file included from /wrkdirs/usr/ports/science/sirius/work/SIRIUS-7.9.0/src/unit_cell/atom.hpp:19:
In file included from /wrkdirs/usr/ports/science/sirius/work/SIRIUS-7.9.0/src/unit_cell/atom_symmetry_class.hpp:17:
In file included from /wrkdirs/usr/ports/science/sirius/work/SIRIUS-7.9.0/src/unit_cell/atom_type.hpp:22:
In file included from /wrkdirs/usr/ports/science/sirius/work/SIRIUS-7.9.0/src/unit_cell/hubbard_orbitals_descriptor.hpp:17:
In file included from /wrkdirs/usr/ports/science/sirius/work/SIRIUS-7.9.0/src/core/sht/sht.hpp:29:
In file included from /wrkdirs/usr/ports/science/sirius/work/SIRIUS-7.9.0/src/core/la/linalg.hpp:32:
In file included from /wrkdirs/usr/ports/science/sirius/work/SIRIUS-7.9.0/src/core/la/dmatrix.hpp:23:
/wrkdirs/usr/ports/science/sirius/work/SIRIUS-7.9.0/src/core/hdf5_tree.hpp:396:22: warning: variable length arrays in C++ are a Clang extension [-Wvla-cxx-extension]
396 | hsize_t dims[ndims];
| ^~~~~
/wrkdirs/usr/ports/science/sirius/work/SIRIUS-7.9.0/src/core/hdf5_tree.hpp:396:22: note: read of non-const variable 'ndims' is not allowed in a constant expression
/wrkdirs/usr/ports/science/sirius/work/SIRIUS-7.9.0/src/core/hdf5_tree.hpp:390:13: note: declared here
390 | int ndims = H5Sget_simple_extent_ndims(dataspace_id);
| ^
--- src/CMakeFiles/sirius_cxx.dir/hamiltonian/local_operator.cpp.o ---
In file included from /wrkdirs/usr/ports/science/sirius/work/SIRIUS-7.9.0/src/hamiltonian/local_operator.cpp:15:
In file included from /wrkdirs/usr/ports/science/sirius/work/SIRIUS-7.9.0/src/potential/potential.hpp:17:
In file included from /wrkdirs/usr/ports/science/sirius/work/SIRIUS-7.9.0/src/density/density.hpp:18:
In file included from /wrkdirs/usr/ports/science/sirius/work/SIRIUS-7.9.0/src/function3d/field4d.hpp:21:
In file included from /wrkdirs/usr/ports/science/sirius/work/SIRIUS-7.9.0/src/function3d/periodic_function.hpp:17:
In file included from /wrkdirs/usr/ports/science/sirius/work/SIRIUS-7.9.0/src/context/simulation_context.hpp:28:
In file included from /wrkdirs/usr/ports/science/sirius/work/SIRIUS-7.9.0/src/radial/radial_integrals.hpp:17:
In file included from /wrkdirs/usr/ports/science/sirius/work/SIRIUS-7.9.0/src/unit_cell/unit_cell.hpp:19:
In file included from /wrkdirs/usr/ports/science/sirius/work/SIRIUS-7.9.0/src/unit_cell/atom.hpp:19:
In file included from /wrkdirs/usr/ports/science/sirius/work/SIRIUS-7.9.0/src/unit_cell/atom_symmetry_class.hpp:17:
In file included from /wrkdirs/usr/ports/science/sirius/work/SIRIUS-7.9.0/src/unit_cell/atom_type.hpp:22:
In file included from /wrkdirs/usr/ports/science/sirius/work/SIRIUS-7.9.0/src/unit_cell/hubbard_orbitals_descriptor.hpp:17:
In file included from /wrkdirs/usr/ports/science/sirius/work/SIRIUS-7.9.0/src/core/sht/sht.hpp:29:
In file included from /wrkdirs/usr/ports/science/sirius/work/SIRIUS-7.9.0/src/core/la/linalg.hpp:32:
In file included from /wrkdirs/usr/ports/science/sirius/work/SIRIUS-7.9.0/src/core/la/dmatrix.hpp:23:
/wrkdirs/usr/ports/science/sirius/work/SIRIUS-7.9.0/src/core/hdf5_tree.hpp:396:22: warning: variable length arrays in C++ are a Clang extension [-Wvla-cxx-extension]
396 | hsize_t dims[ndims];
| ^~~~~
/wrkdirs/usr/ports/science/sirius/work/SIRIUS-7.9.0/src/core/hdf5_tree.hpp:396:22: note: read of non-const variable 'ndims' is not allowed in a constant expression
/wrkdirs/usr/ports/science/sirius/work/SIRIUS-7.9.0/src/core/hdf5_tree.hpp:390:13: note: declared here
390 | int ndims = H5Sget_simple_extent_ndims(dataspace_id);
| ^
--- src/CMakeFiles/sirius_cxx.dir/hamiltonian/hamiltonian_k.cpp.o ---
/wrkdirs/usr/ports/science/sirius/work/SIRIUS-7.9.0/src/hamiltonian/hamiltonian_k.cpp:875:30: warning: lambda capture 'this' is not used [-Wunused-lambda-capture]
875 | auto apply_omt_apw_lo = [this, &ctx, &phi__, &b__, &spl_atoms](wf::Wave_functions_mt<T>& o_apw_lo__) {
| ^
/wrkdirs/usr/ports/science/sirius/work/SIRIUS-7.9.0/src/hamiltonian/hamiltonian_k.cpp:1414:16: note: in instantiation of member function 'sirius::Hamiltonian_k<double>::apply_fv_h_o' requested here
1414 | template class Hamiltonian_k<double>;
| ^
/wrkdirs/usr/ports/science/sirius/work/SIRIUS-7.9.0/src/hamiltonian/hamiltonian_k.cpp:929:28: warning: lambda capture 'this' is not used [-Wunused-lambda-capture]
929 | auto appy_omt_lo_lo = [this, &ctx, &phi__, &b__, &spl_atoms](wf::Wave_functions<T>& ophi__) {
| ^
/wrkdirs/usr/ports/science/sirius/work/SIRIUS-7.9.0/src/hamiltonian/hamiltonian_k.cpp:1011:30: warning: lambda capture 'this' is not used [-Wunused-lambda-capture]
1011 | auto apply_omt_lo_apw = [this, &ctx, mem, &b__, &spl_atoms](wf::Wave_functions_mt<T> const& alm_phi__,
| ^
/wrkdirs/usr/ports/science/sirius/work/SIRIUS-7.9.0/src/hamiltonian/hamiltonian_k.cpp:1011:42: warning: lambda capture 'mem' is not used [-Wunused-lambda-capture]
1011 | auto apply_omt_lo_apw = [this, &ctx, mem, &b__, &spl_atoms](wf::Wave_functions_mt<T> const& alm_phi__,
| ^
DeclRefExpr for Decl not entered in LocalDeclMap?
UNREACHABLE executed at /usr/local/poudriere/jails/main-arm64/usr/src/contrib/llvm-project/clang/lib/CodeGen/CGExpr.cpp:3109!
PLEASE submit a bug report to https://bugs.freebsd.org/submit/ and include the crash backtrace, preprocessed source, and associated run script.
Stack dump:
0. Program arguments: /usr/bin/c++ -DFMT_SHARED -DH5_BUILT_AS_DYNAMIC_LIB -DSIRIUS_GPU_MEMORY_ALIGMENT= -DSIRIUS_PROFILE -Dsirius_cxx_EXPORTS -I/wrkdirs/usr/ports/science/sirius/work/SIRIUS-7.9.0/src -I/wrkdirs/usr/ports/science/sirius/work/.build/src -isystem /usr/local/include -isystem /usr/local/include/spfft -isystem /usr/local/include/json-c -isystem /usr/local/include/gcc13 -isystem /usr/local/include/spla -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wall -O3 -DNDEBUG -std=gnu++20 -fPIC -fopenmp=libomp -MD -MT src/CMakeFiles/sirius_cxx.dir/hamiltonian/hamiltonian_k.cpp.o -MF CMakeFiles/sirius_cxx.dir/hamiltonian/hamiltonian_k.cpp.o.d -o CMakeFiles/sirius_cxx.dir/hamiltonian/hamiltonian_k.cpp.o -c /wrkdirs/usr/ports/science/sirius/work/SIRIUS-7.9.0/src/hamiltonian/hamiltonian_k.cpp
1. <eof> parser at end of file
2. Per-file LLVM IR generation
3. /wrkdirs/usr/ports/science/sirius/work/SIRIUS-7.9.0/src/hamiltonian/hamiltonian_k.cpp:849:29: Generating code for declaration 'sirius::Hamiltonian_k<double>::apply_fv_h_o(bool, bool, wf::band_range, wf::Wave_functions<double> &, wf::Wave_functions<double> *, wf::Wave_functions<double> *)::(anonymous class)::operator()'
#0 0x000064946932e180 llvm::sys::PrintStackTrace(llvm::raw_ostream&, int) (/usr/lib/libprivatellvm.so.19+0x3f2e180)
#1 0x000064946932c048 llvm::sys::RunSignalHandlers() (/usr/lib/libprivatellvm.so.19+0x3f2c048)
#2 0x00006494692da974 (/usr/lib/libprivatellvm.so.19+0x3eda974)
#3 0x000064946d6a92bc (/lib/libthr.so.3+0x2b2bc)
c++: error: clang frontend command failed with exit code 134 (use -v to see invocation)
FreeBSD clang version 19.1.7 (https://github.com/llvm/llvm-project.git llvmorg-19.1.7-0-gcd708029e0b2)
Target: aarch64-unknown-freebsd16.0
Thread model: posix
InstalledDir: /usr/bin
Build config: +assertions
c++: note: diagnostic msg:
********************
PLEASE ATTACH THE FOLLOWING FILES TO THE BUG REPORT:
Preprocessed source(s) and associated run script(s) are located at:
c++: note: diagnostic msg: /tmp/hamiltonian_k-7aca00.cpp
c++: note: diagnostic msg: /tmp/hamiltonian_k-7aca00.sh
c++: note: diagnostic msg:
********************
*** [src/CMakeFiles/sirius_cxx.dir/hamiltonian/hamiltonian_k.cpp.o] Error code 1
make[2]: stopped making "src/CMakeFiles/sirius_cxx.dir/build" in /wrkdirs/usr/ports/science/sirius/work/.build
--- src/CMakeFiles/sirius_cxx.dir/hamiltonian/hamiltonian.cpp.o ---
4 warnings generated.
--- src/CMakeFiles/sirius_cxx.dir/hamiltonian/local_operator.cpp.o ---
4 warnings generated.
make[2]: 1 error
make[2]: stopped making "src/CMakeFiles/sirius_cxx.dir/build" in /wrkdirs/usr/ports/science/sirius/work/.build
*** [src/CMakeFiles/sirius_cxx.dir/all] Error code 2
make[1]: stopped making "all" in /wrkdirs/usr/ports/science/sirius/work/.build
make[1]: 1 error
make[1]: stopped making "all" in /wrkdirs/usr/ports/science/sirius/work/.build
*** [all] Error code 2
make: stopped making "all" in /wrkdirs/usr/ports/science/sirius/work/.build
make: 1 error
make: stopped making "all" in /wrkdirs/usr/ports/science/sirius/work/.build
===> Compilation failed unexpectedly.
Try to set MAKE_JOBS_UNSAFE=yes and rebuild before reporting the failure to
the maintainer.
*** Error code 1
Stop.
make: stopped making "build" in /usr/ports/science/sirius