[package - 134amd64-default][science/pastix] Failed for pastix-6.3.2_2 in configure
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Date: Mon, 28 Apr 2025 03:38:27 UTC
You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.
Maintainer: thierry@FreeBSD.org
Log URL: https://pkg-status.freebsd.org/beefy16/data/134amd64-default/dc1d367f2961/logs/pastix-6.3.2_2.log
Build URL: https://pkg-status.freebsd.org/beefy16/build.html?mastername=134amd64-default&build=dc1d367f2961
Log:
=>> Building science/pastix
build started at Mon Apr 28 03:34:18 UTC 2025
port directory: /usr/ports/science/pastix
package name: pastix-6.3.2_2
building for: FreeBSD 134amd64-default-job-04 13.4-RELEASE-p5 FreeBSD 13.4-RELEASE-p5 amd64
maintained by: thierry@FreeBSD.org
Makefile datestamp: -rw-r--r-- 1 root wheel 1837 Apr 5 01:08 /usr/ports/science/pastix/Makefile
Ports top last git commit: dc1d367f296
Ports top unclean checkout: no
Port dir last git commit: 099df7445d1
Port dir unclean checkout: no
Poudriere version: poudriere-git-3.4.2-11-gfa886a3d
Host OSVERSION: 1500035
Jail OSVERSION: 1304000
Job Id: 04
---Begin Environment---
SHELL=/bin/csh
OSVERSION=1304000
UNAME_v=FreeBSD 13.4-RELEASE-p5
UNAME_r=13.4-RELEASE-p5
BLOCKSIZE=K
MAIL=/var/mail/root
MM_CHARSET=UTF-8
LANG=C.UTF-8
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
MAKE_OBJDIR_CHECK_WRITABLE=0
LOCALBASE=/usr/local
USER=root
POUDRIERE_NAME=poudriere-git
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.4.2-11-gfa886a3d
MASTERMNT=/usr/local/poudriere/data/.m/134amd64-default/ref
LC_COLLATE=C
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=tmux-256color
OUTPUT_REDIRECTED_STDERR=4
OUTPUT_REDIRECTED=1
PWD=/usr/local/poudriere/data/.m/134amd64-default/04/.p
OUTPUT_REDIRECTED_STDOUT=3
P_PORTS_FEATURES=FLAVORS SUBPACKAGES SELECTED_OPTIONS
MASTERNAME=134amd64-default
SCRIPTPREFIX=/usr/local/share/poudriere
SCRIPTNAME=bulk.sh
OLDPWD=/usr/local/poudriere/data/.m/134amd64-default/ref/.p/pool
POUDRIERE_PKGNAME=poudriere-git-3.4.2-11-gfa886a3d
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---
---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
MAKE_ARGS=
---End Poudriere Port Flags/Env---
---Begin OPTIONS List---
===> The following configuration options are available for pastix-6.3.2_2:
EXAMPLES=on: Build and/or install examples
===> Use 'make config' to modify these settings
---End OPTIONS List---
--MAINTAINER--
thierry@FreeBSD.org
--End MAINTAINER--
--CONFIGURE_ARGS--
--End CONFIGURE_ARGS--
--CONFIGURE_ENV--
BLA_VENDOR="OpenBLAS" F77="gfortran13" F90="gfortran13" FC="gfortran13" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc13" F90FLAGS="-O -Wl,-rpath=/usr/local/lib/gcc13" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc13" PKG_CONFIG=pkgconf PYTHON="/usr/local/bin/python3.11" XDG_DATA_HOME=/wrkdirs/usr/ports/science/pastix/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/pastix/work XDG_CACHE_HOME=/wrkdirs/usr/ports/science/pastix/work/.cache HOME=/wrkdirs/usr/ports/science/pastix/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/pastix/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/science/pastix/work/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--
--MAKE_ENV--
F77="gfortran13" F90="gfortran13" FC="gfortran13" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc13" F90FLAGS="-O -Wl,-rpath=/usr/local/lib/gcc13" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc13" XDG_DATA_HOME=/wrkdirs/usr/ports/science/pastix/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/pastix/work XDG_CACHE_HOME=/wrkdirs/usr/ports/science/pastix/work/.cache HOME=/wrkdirs/usr/ports/science/pastix/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/pastix/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/science/pastix/work/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES ADDR2LINE="/usr/local/bin/addr2line" AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/
bin/objdump" RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" PREFIX=/usr/local LOCALBASE=/usr/local CC="cc" CFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " CPP="cpp" CPPFLAGS="" LDFLAGS=" -lm -L/usr/local/lib -Wl,-rpath=/usr/local/lib/gcc13 -L/usr/local/lib/gcc13 -fstack-protector-strong " LIBS="" CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444"
--End MAKE_ENV--
--PLIST_SUB--
VER=6.3.2 PORTEXAMPLES="" CMAKE_BUILD_TYPE="release" PYTHON_INCLUDEDIR=include/python3.11 PYTHON_LIBDIR=lib/python3.11 PYTHON_PLATFORM=freebsd13 PYTHON_SITELIBDIR=lib/python3.11/site-packages PYTHON_SUFFIX=311 PYTHON_EXT_SUFFIX=.cpython-311 PYTHON_VER=3.11 PYTHON_VERSION=python3.11 PYTHON2="@comment " PYTHON3="" OSREL=13.4 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/pastix" EXAMPLESDIR="share/examples/pastix" DATADIR="share/pastix" WWWDIR="www/pastix" ETCDIR="etc/pastix"
--End PLIST_SUB--
--SUB_LIST--
PYTHON_INCLUDEDIR=/usr/local/include/python3.11 PYTHON_LIBDIR=/usr/local/lib/python3.11 PYTHON_PLATFORM=freebsd13 PYTHON_SITELIBDIR=/usr/local/lib/python3.11/site-packages PYTHON_SUFFIX=311 PYTHON_EXT_SUFFIX=.cpython-311 PYTHON_VER=3.11 PYTHON_VERSION=python3.11 PYTHON2="@comment " PYTHON3="" PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/pastix DOCSDIR=/usr/local/share/doc/pastix EXAMPLESDIR=/usr/local/share/examples/pastix WWWDIR=/usr/local/www/pastix ETCDIR=/usr/local/etc/pastix
--End SUB_LIST--
---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
#### ####
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure. It currently retries the same
# failed mirror and then fails rather then trying another. It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 3 jobs
MAKE_JOBS_NUMBER=3
#### Misc Poudriere ####
.include "/etc/make.conf.ports_env"
GID=0
UID=0
---End make.conf---
--Resource limits--
cpu time (seconds, -t) unlimited
file size (512-blocks, -f) unlimited
data seg size (kbytes, -d) 33554432
stack size (kbytes, -s) 524288
core file size (512-blocks, -c) unlimited
max memory size (kbytes, -m) unlimited
locked memory (kbytes, -l) unlimited
max user processes (-u) 89999
open files (-n) 8192
virtual mem size (kbytes, -v) unlimited
swap limit (kbytes, -w) unlimited
socket buffer size (bytes, -b) unlimited
pseudo-terminals (-p) unlimited
kqueues (-k) unlimited
umtx shared locks (-o) unlimited
--End resource limits--
=======================<phase: check-sanity >============================
===== env: NO_DEPENDS=yes USER=root UID=0 GID=0
===> NOTICE:
This port is deprecated; you may wish to reconsider installing it:
Depends on expired lang/julia.
It is scheduled to be removed on or after 2025-06-01.
===> License LGPL3 accepted by the user
===========================================================================
=======================<phase: pkg-depends >============================
===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0
===> pastix-6.3.2_2 depends on file: /usr/local/sbin/pkg - not found
===> Installing existing package /packages/All/pkg-2.1.2.pkg
[134amd64-default-job-04] Installing pkg-2.1.2...
[134amd64-default-job-04] Extracting pkg-2.1.2: .......... done
===> pastix-6.3.2_2 depends on file: /usr/local/sbin/pkg - found
===> Returning to build of pastix-6.3.2_2
===========================================================================
=======================<phase: fetch-depends >============================
===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0
===========================================================================
=======================<phase: fetch >============================
===== env: NO_DEPENDS=yes USER=root UID=0 GID=0
===> NOTICE:
This port is deprecated; you may wish to reconsider installing it:
Depends on expired lang/julia.
It is scheduled to be removed on or after 2025-06-01.
===> License LGPL3 accepted by the user
===> Fetching all distfiles required by pastix-6.3.2_2 for building
===========================================================================
=======================<phase: checksum >============================
===== env: NO_DEPENDS=yes USER=root UID=0 GID=0
===> NOTICE:
This port is deprecated; you may wish to reconsider installing it:
Depends on expired lang/julia.
It is scheduled to be removed on or after 2025-06-01.
===> License LGPL3 accepted by the user
===> Fetching all distfiles required by pastix-6.3.2_2 for building
=> SHA256 Checksum OK for pastix-6.3.2.tar.gz.
===========================================================================
=======================<phase: extract-depends>============================
===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0
===========================================================================
=======================<phase: extract >============================
===== env: NO_DEPENDS=yes USER=root UID=0 GID=0
===> NOTICE:
This port is deprecated; you may wish to reconsider installing it:
Depends on expired lang/julia.
It is scheduled to be removed on or after 2025-06-01.
===> License LGPL3 accepted by the user
===> Fetching all distfiles required by pastix-6.3.2_2 for building
===> Extracting for pastix-6.3.2_2
=> SHA256 Checksum OK for pastix-6.3.2.tar.gz.
===========================================================================
=======================<phase: patch-depends >============================
<snip>
CMake Deprecation Warning at cmake_modules/CheckSubnormals.cmake:2 (cmake_minimum_required):
Compatibility with CMake < 3.10 will be removed from a future version of
CMake.
Update the VERSION argument <min> value. Or, use the <min>...<max> syntax
to tell CMake that the project requires at least <min> but has been updated
to work with policies introduced by <max> or earlier.
Call Stack (most recent call first):
CMakeLists.txt:95 (include)
-- Performing Test HAVE_FTZ_MACROS
-- Performing Test HAVE_FTZ_MACROS - Success
-- Performing Test HAVE_DAZ_MACROS
-- Performing Test HAVE_DAZ_MACROS - Success
-- Looking for sqrt
-- Looking for sqrt - found
-- Found M:
CMake Deprecation Warning at cmake_modules/morse_cmake/modules/find/FindMorseCommon.cmake:22 (cmake_minimum_required):
Compatibility with CMake < 3.10 will be removed from a future version of
CMake.
Update the VERSION argument <min> value. Or, use the <min>...<max> syntax
to tell CMake that the project requires at least <min> but has been updated
to work with policies introduced by <max> or earlier.
Call Stack (most recent call first):
cmake_modules/morse_cmake/modules/find/FindMorseInit.cmake:34 (include)
cmake_modules/morse_cmake/modules/find/FindCBLAS.cmake:83 (include)
CMakeLists.txt:273 (find_package)
CMake Deprecation Warning at cmake_modules/morse_cmake/modules/find/LibrariesAbsolutePath.cmake:22 (cmake_minimum_required):
Compatibility with CMake < 3.10 will be removed from a future version of
CMake.
Update the VERSION argument <min> value. Or, use the <min>...<max> syntax
to tell CMake that the project requires at least <min> but has been updated
to work with policies introduced by <max> or earlier.
Call Stack (most recent call first):
cmake_modules/morse_cmake/modules/find/FindMorseInit.cmake:40 (include)
cmake_modules/morse_cmake/modules/find/FindCBLAS.cmake:83 (include)
CMakeLists.txt:273 (find_package)
-- Looking for Fortran sgemm
-- Looking for Fortran sgemm - found
-- CBLAS_BLAS BLAS_SEQ
-- Looking for cblas_dscal
-- Looking for cblas_dscal - found
-- Looking for cblas_zgemm3m
-- Looking for cblas_zgemm3m - found
-- Looking for cblas_cgemm3m
-- Looking for cblas_cgemm3m - found
-- CBLAS_WORKS 1
-- Looking for cblas: test with blas succeeded
-- Found CBLAS: /usr/local/lib/libopenblas.so
CMake Deprecation Warning at cmake_modules/morse_cmake/modules/find/FindMorseCommon.cmake:22 (cmake_minimum_required):
Compatibility with CMake < 3.10 will be removed from a future version of
CMake.
Update the VERSION argument <min> value. Or, use the <min>...<max> syntax
to tell CMake that the project requires at least <min> but has been updated
to work with policies introduced by <max> or earlier.
Call Stack (most recent call first):
cmake_modules/morse_cmake/modules/find/FindMorseInit.cmake:34 (include)
cmake_modules/morse_cmake/modules/find/FindLAPACKE.cmake:78 (include)
CMakeLists.txt:282 (find_package)
CMake Deprecation Warning at cmake_modules/morse_cmake/modules/find/LibrariesAbsolutePath.cmake:22 (cmake_minimum_required):
Compatibility with CMake < 3.10 will be removed from a future version of
CMake.
Update the VERSION argument <min> value. Or, use the <min>...<max> syntax
to tell CMake that the project requires at least <min> but has been updated
to work with policies introduced by <max> or earlier.
Call Stack (most recent call first):
cmake_modules/morse_cmake/modules/find/FindMorseInit.cmake:40 (include)
cmake_modules/morse_cmake/modules/find/FindLAPACKE.cmake:78 (include)
CMakeLists.txt:282 (find_package)
-- Looking for Fortran cheev
-- Looking for Fortran cheev - found
-- Looking for LAPACKE_dgeqrf
-- Looking for LAPACKE_dgeqrf - found
-- Looking for LAPACKE_dlascl_work
-- Looking for LAPACKE_dlascl_work - found
-- Looking for lapacke: test with lapack succeeded
-- Found LAPACKE: /usr/local/lib/libopenblas.so
CMake Deprecation Warning at cmake_modules/morse_cmake/modules/find/FindMorseCommon.cmake:22 (cmake_minimum_required):
Compatibility with CMake < 3.10 will be removed from a future version of
CMake.
Update the VERSION argument <min> value. Or, use the <min>...<max> syntax
to tell CMake that the project requires at least <min> but has been updated
to work with policies introduced by <max> or earlier.
Call Stack (most recent call first):
cmake_modules/morse_cmake/modules/find/FindMorseInit.cmake:34 (include)
cmake_modules/morse_cmake/modules/find/FindHWLOC.cmake:54 (include)
CMakeLists.txt:288 (find_package)
CMake Deprecation Warning at cmake_modules/morse_cmake/modules/find/LibrariesAbsolutePath.cmake:22 (cmake_minimum_required):
Compatibility with CMake < 3.10 will be removed from a future version of
CMake.
Update the VERSION argument <min> value. Or, use the <min>...<max> syntax
to tell CMake that the project requires at least <min> but has been updated
to work with policies introduced by <max> or earlier.
Call Stack (most recent call first):
cmake_modules/morse_cmake/modules/find/FindMorseInit.cmake:40 (include)
cmake_modules/morse_cmake/modules/find/FindHWLOC.cmake:54 (include)
CMakeLists.txt:288 (find_package)
-- FindHWLOC needs pkg-config program and PKG_CONFIG_PATH set HWLOC.pc file path.
-- Checking for one of the modules 'hwloc'
-- Looking for HWLOC - found using PkgConfig
-- Looking for hwloc_topology_init
-- Looking for hwloc_topology_init - found
-- Found HWLOC: /usr/local/lib/libhwloc.so
CMake Deprecation Warning at cmake_modules/morse_cmake/modules/find/FindMorseCommon.cmake:22 (cmake_minimum_required):
Compatibility with CMake < 3.10 will be removed from a future version of
CMake.
Update the VERSION argument <min> value. Or, use the <min>...<max> syntax
to tell CMake that the project requires at least <min> but has been updated
to work with policies introduced by <max> or earlier.
Call Stack (most recent call first):
cmake_modules/morse_cmake/modules/find/FindMorseInit.cmake:34 (include)
cmake_modules/morse_cmake/modules/find/FindSCOTCH.cmake:61 (include)
CMakeLists.txt:439 (find_package)
CMake Deprecation Warning at cmake_modules/morse_cmake/modules/find/LibrariesAbsolutePath.cmake:22 (cmake_minimum_required):
Compatibility with CMake < 3.10 will be removed from a future version of
CMake.
Update the VERSION argument <min> value. Or, use the <min>...<max> syntax
to tell CMake that the project requires at least <min> but has been updated
to work with policies introduced by <max> or earlier.
Call Stack (most recent call first):
cmake_modules/morse_cmake/modules/find/FindMorseInit.cmake:40 (include)
cmake_modules/morse_cmake/modules/find/FindSCOTCH.cmake:61 (include)
CMakeLists.txt:439 (find_package)
-- Looking for SCOTCH_graphInit
-- Looking for SCOTCH_graphInit - found
-- Looking for SCOTCH_contextInit
-- Looking for SCOTCH_contextInit - not found
-- Performing Test SCOTCH_Num_4
-- Performing Test SCOTCH_Num_4 - Failed
-- Performing Test SCOTCH_Num_8
-- Performing Test SCOTCH_Num_8 - Success
-- Found SCOTCH: /usr/local/lib/libscotch.so;/usr/local/lib/libscotcherr.so;/usr/lib/libpthread.so;/usr/lib/libz.so;/usr/lib/libm.so;/usr/lib/librt.so
CMake Deprecation Warning at cmake_modules/morse_cmake/modules/find/FindMorseCommon.cmake:22 (cmake_minimum_required):
Compatibility with CMake < 3.10 will be removed from a future version of
CMake.
Update the VERSION argument <min> value. Or, use the <min>...<max> syntax
to tell CMake that the project requires at least <min> but has been updated
to work with policies introduced by <max> or earlier.
Call Stack (most recent call first):
cmake_modules/morse_cmake/modules/find/FindMorseInit.cmake:34 (include)
cmake_modules/morse_cmake/modules/find/FindMETIS.cmake:56 (include)
CMakeLists.txt:462 (find_package)
CMake Deprecation Warning at cmake_modules/morse_cmake/modules/find/LibrariesAbsolutePath.cmake:22 (cmake_minimum_required):
Compatibility with CMake < 3.10 will be removed from a future version of
CMake.
Update the VERSION argument <min> value. Or, use the <min>...<max> syntax
to tell CMake that the project requires at least <min> but has been updated
to work with policies introduced by <max> or earlier.
Call Stack (most recent call first):
cmake_modules/morse_cmake/modules/find/FindMorseInit.cmake:40 (include)
cmake_modules/morse_cmake/modules/find/FindMETIS.cmake:56 (include)
CMakeLists.txt:462 (find_package)
-- Looking for METIS_NodeND
-- Looking for METIS_NodeND - found
-- Performing Test METIS_Idx_4
-- Performing Test METIS_Idx_4 - Success
-- Performing Test METIS_Idx_8
-- Performing Test METIS_Idx_8 - Failed
-- Found METIS: /usr/local/lib/libmetis.so;
CMake Error at CMakeLists.txt:470 (message):
PASTIX_INT64 is enabled and provided Metis is not compiled with int64
support.
-- Configuring incomplete, errors occurred!
*** Error code 1
Stop.
make: stopped in /usr/ports/science/pastix