[package - main-i386-default][science/py-arbor] Failed for py311-arbor-0.10.1 in configure
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Date: Thu, 05 Sep 2024 03:13:35 UTC
You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.
Maintainer: yuri@FreeBSD.org
Log URL: https://pkg-status.freebsd.org/beefy17/data/main-i386-default/pb9994ae18767_s79eba754bec/logs/py311-arbor-0.10.1.log
Build URL: https://pkg-status.freebsd.org/beefy17/build.html?mastername=main-i386-default&build=pb9994ae18767_s79eba754bec
Log:
=>> Building science/py-arbor
build started at Thu Sep 5 03:13:30 UTC 2024
port directory: /usr/ports/science/py-arbor
package name: py311-arbor-0.10.1
building for: FreeBSD main-i386-default-job-04 15.0-CURRENT FreeBSD 15.0-CURRENT 1500023 i386
maintained by: yuri@FreeBSD.org
Makefile datestamp: -rw-r--r-- 1 root wheel 1233 Aug 29 01:01 /usr/ports/science/py-arbor/Makefile
Ports top last git commit: b9994ae1876
Ports top unclean checkout: no
Port dir last git commit: d59c500b737
Port dir unclean checkout: no
Poudriere version: poudriere-git-3.4.2
Host OSVERSION: 1500023
Jail OSVERSION: 1500023
Job Id: 04
---Begin Environment---
SHELL=/bin/sh
BLOCKSIZE=K
MAIL=/var/mail/root
MM_CHARSET=UTF-8
LANG=C.UTF-8
OSVERSION=1500023
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
MAKE_OBJDIR_CHECK_WRITABLE=0
UNAME_m=i386
UNAME_p=i386
UNAME_r=15.0-CURRENT
LOCALBASE=/usr/local
UNAME_v=FreeBSD 15.0-CURRENT 1500023
USER=root
POUDRIERE_NAME=poudriere-git
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.4.2
MASTERMNT=/usr/local/poudriere/data/.m/main-i386-default/ref
LC_COLLATE=C
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
OUTPUT_REDIRECTED_STDERR=4
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POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---
---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=py311
MAKE_ARGS= FLAVOR=py311
---End Poudriere Port Flags/Env---
---Begin OPTIONS List---
---End OPTIONS List---
--MAINTAINER--
yuri@FreeBSD.org
--End MAINTAINER--
--CONFIGURE_ARGS--
--End CONFIGURE_ARGS--
--CONFIGURE_ENV--
PYTHON="/usr/local/bin/python3.11" XDG_DATA_HOME=/wrkdirs/usr/ports/science/py-arbor/work-py311 XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/py-arbor/work-py311 XDG_CACHE_HOME=/wrkdirs/usr/ports/science/py-arbor/work-py311/.cache HOME=/wrkdirs/usr/ports/science/py-arbor/work-py311 TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/py-arbor/work-py311/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/science/py-arbor/work-py311/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig SHELL=/bin/sh CONFIG_SHELL=/bin/sh CMAKE_PREFIX_PATH="/usr/local"
--End CONFIGURE_ENV--
--MAKE_ENV--
NINJA_STATUS="[%p %s/%t] " XDG_DATA_HOME=/wrkdirs/usr/ports/science/py-arbor/work-py311 XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/py-arbor/work-py311 XDG_CACHE_HOME=/wrkdirs/usr/ports/science/py-arbor/work-py311/.cache HOME=/wrkdirs/usr/ports/science/py-arbor/work-py311 TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/py-arbor/work-py311/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/science/py-arbor/work-py311/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES DESTDIR=/wrkdirs/usr/ports/science/py-arbor/work-py311/stage PREFIX=/usr/local LOCALBASE=/usr/local CC="cc" CFLAGS="-O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing " CPP="cpp" CPPFLAGS="-isystem /usr/local/include" LDFLAGS=" -fstack-protector-strong -L/usr/local/lib " LIBS="" CXX="c++" CXXFLAGS="-O2 -pipe -fs
tack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -fPIC -isystem /usr/local/include " BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444"
--End MAKE_ENV--
--PLIST_SUB--
CMAKE_BUILD_TYPE="release" PYTHON_INCLUDEDIR=include/python3.11 PYTHON_LIBDIR=lib/python3.11 PYTHON_PLATFORM=freebsd15 PYTHON_SITELIBDIR=lib/python3.11/site-packages PYTHON_SUFFIX=311 PYTHON_EXT_SUFFIX=.cpython-311 PYTHON_VER=3.11 PYTHON_VERSION=python3.11 PYTHON2="@comment " PYTHON3="" OSREL=15.0 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/arbor" EXAMPLESDIR="share/examples/arbor" DATADIR="share/arbor" WWWDIR="www/arbor" ETCDIR="etc/arbor"
--End PLIST_SUB--
--SUB_LIST--
PYTHON_INCLUDEDIR=/usr/local/include/python3.11 PYTHON_LIBDIR=/usr/local/lib/python3.11 PYTHON_PLATFORM=freebsd15 PYTHON_SITELIBDIR=/usr/local/lib/python3.11/site-packages PYTHON_SUFFIX=311 PYTHON_EXT_SUFFIX=.cpython-311 PYTHON_VER=3.11 PYTHON_VERSION=python3.11 PYTHON2="@comment " PYTHON3="" PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/arbor DOCSDIR=/usr/local/share/doc/arbor EXAMPLESDIR=/usr/local/share/examples/arbor WWWDIR=/usr/local/www/arbor ETCDIR=/usr/local/etc/arbor
--End SUB_LIST--
---Begin make.conf---
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure. It currently retries the same
# failed mirror and then fails rather then trying another. It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 3 jobs
MAKE_JOBS_NUMBER=3
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
MACHINE=i386
MACHINE_ARCH=i386
ARCH=${MACHINE_ARCH}
#### ####
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure. It currently retries the same
# failed mirror and then fails rather then trying another. It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 3 jobs
MAKE_JOBS_NUMBER=3
#### Misc Poudriere ####
.include "/etc/make.conf.ports_env"
GID=0
UID=0
---End make.conf---
--Resource limits--
cpu time (seconds, -t) unlimited
file size (512-blocks, -f) unlimited
data seg size (kbytes, -d) 524288
stack size (kbytes, -s) 65536
core file size (512-blocks, -c) unlimited
max memory size (kbytes, -m) unlimited
locked memory (kbytes, -l) unlimited
max user processes (-u) 89999
open files (-n) 8192
virtual mem size (kbytes, -v) unlimited
swap limit (kbytes, -w) unlimited
socket buffer size (bytes, -b) unlimited
pseudo-terminals (-p) unlimited
kqueues (-k) unlimited
umtx shared locks (-o) unlimited
--End resource limits--
=======================<phase: check-sanity >============================
===== env: NO_DEPENDS=yes USER=root UID=0 GID=0
===> License BSD3CLAUSE accepted by the user
===========================================================================
=======================<phase: pkg-depends >============================
===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0
===> py311-arbor-0.10.1 depends on file: /usr/local/sbin/pkg - not found
===> Installing existing package /packages/All/pkg-1.21.3.pkg
[main-i386-default-job-04] Installing pkg-1.21.3...
[main-i386-default-job-04] Extracting pkg-1.21.3: .......... done
===> py311-arbor-0.10.1 depends on file: /usr/local/sbin/pkg - found
===> Returning to build of py311-arbor-0.10.1
===========================================================================
=======================<phase: fetch-depends >============================
===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0
===========================================================================
=======================<phase: fetch >============================
===== env: NO_DEPENDS=yes USER=root UID=0 GID=0
===> License BSD3CLAUSE accepted by the user
===> Fetching all distfiles required by py311-arbor-0.10.1 for building
===========================================================================
=======================<phase: checksum >============================
===== env: NO_DEPENDS=yes USER=root UID=0 GID=0
===> License BSD3CLAUSE accepted by the user
===> Fetching all distfiles required by py311-arbor-0.10.1 for building
=> SHA256 Checksum OK for arbor-sim-arbor-v0.10.1_GH0.tar.gz.
===========================================================================
=======================<phase: extract-depends>============================
===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0
===========================================================================
=======================<phase: extract >============================
===== env: NO_DEPENDS=yes USER=root UID=0 GID=0
===> License BSD3CLAUSE accepted by the user
===> Fetching all distfiles required by py311-arbor-0.10.1 for building
===> Extracting for py311-arbor-0.10.1
=> SHA256 Checksum OK for arbor-sim-arbor-v0.10.1_GH0.tar.gz.
===========================================================================
=======================<phase: patch-depends >============================
===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0
===========================================================================
=======================<phase: patch >============================
===== env: NO_DEPENDS=yes USER=root UID=0 GID=0
===> Patching for py311-arbor-0.10.1
===> Applying FreeBSD patches for py311-arbor-0.10.1 from /usr/ports/science/py-arbor/files
===========================================================================
=======================<phase: build-depends >============================
===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0
===> py311-arbor-0.10.1 depends on package: pybind11>0 - not found
===> Installing existing package /packages/All/pybind11-2.13.5.pkg
[main-i386-default-job-04] Installing pybind11-2.13.5...
[main-i386-default-job-04] Extracting pybind11-2.13.5: .......... done
===> py311-arbor-0.10.1 depends on package: pybind11>0 - found
===> Returning to build of py311-arbor-0.10.1
===> py311-arbor-0.10.1 depends on package: nlohmann-json>0 - not found
===> Installing existing package /packages/All/nlohmann-json-3.11.3.pkg
[main-i386-default-job-04] Installing nlohmann-json-3.11.3...
[main-i386-default-job-04] Extracting nlohmann-json-3.11.3: .......... done
===> py311-arbor-0.10.1 depends on package: nlohmann-json>0 - found
===> Returning to build of py311-arbor-0.10.1
===> py311-arbor-0.10.1 depends on file: /usr/local/bin/cmake - not found
===> Installing existing package /packages/All/cmake-core-3.30.3.pkg
[main-i386-default-job-04] Installing cmake-core-3.30.3...
[main-i386-default-job-04] `-- Installing expat-2.6.2...
[main-i386-default-job-04] `-- Extracting expat-2.6.2: .......... done
[main-i386-default-job-04] `-- Installing jsoncpp-1.9.5...
[main-i386-default-job-04] `-- Extracting jsoncpp-1.9.5: .......... done
[main-i386-default-job-04] `-- Installing libuv-1.48.0...
[main-i386-default-job-04] `-- Extracting libuv-1.48.0: .......... done
[main-i386-default-job-04] `-- Installing rhash-1.4.4_1...
[main-i386-default-job-04] | `-- Installing gettext-runtime-0.22.5...
[main-i386-default-job-04] | | `-- Installing indexinfo-0.3.1...
[main-i386-default-job-04] | | `-- Extracting indexinfo-0.3.1: .... done
[main-i386-default-job-04] | `-- Extracting gettext-runtime-0.22.5: .......... done
[main-i386-default-job-04] `-- Extracting rhash-1.4.4_1: .......... done
[main-i386-default-job-04] Extracting cmake-core-3.30.3: .......... done
===> py311-arbor-0.10.1 depends on file: /usr/local/bin/cmake - found
===> Returning to build of py311-arbor-0.10.1
===> py311-arbor-0.10.1 depends on executable: ninja - not found
===> Installing existing package /packages/All/ninja-1.11.1,4.pkg
[main-i386-default-job-04] Installing ninja-1.11.1,4...
[main-i386-default-job-04] `-- Installing python311-3.11.9_1...
[main-i386-default-job-04] | `-- Installing libffi-3.4.6...
[main-i386-default-job-04] | `-- Extracting libffi-3.4.6: .......... done
[main-i386-default-job-04] | `-- Installing mpdecimal-4.0.0...
[main-i386-default-job-04] | `-- Extracting mpdecimal-4.0.0: .......... done
[main-i386-default-job-04] | `-- Installing readline-8.2.10...
[main-i386-default-job-04] | `-- Extracting readline-8.2.10: .......... done
[main-i386-default-job-04] `-- Extracting python311-3.11.9_1: .......... done
[main-i386-default-job-04] Extracting ninja-1.11.1,4: ........ done
=====
Message from python311-3.11.9_1:
--
Note that some standard Python modules are provided as separate ports
as they require additional dependencies. They are available as:
py311-gdbm databases/py-gdbm@py311
py311-sqlite3 databases/py-sqlite3@py311
py311-tkinter x11-toolkits/py-tkinter@py311
===> py311-arbor-0.10.1 depends on executable: ninja - found
===> Returning to build of py311-arbor-0.10.1
===> py311-arbor-0.10.1 depends on file: /usr/local/bin/python3.11 - found
===========================================================================
=======================<phase: lib-depends >============================
===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0
===> py311-arbor-0.10.1 depends on shared library: libarbor.so - not found
===> Installing existing package /packages/All/arbor-0.10.1_1.pkg
[main-i386-default-job-04] Installing arbor-0.10.1_1...
[main-i386-default-job-04] `-- Installing hwloc2-2.8.0_1...
[main-i386-default-job-04] | `-- Installing level-zero-1.17.25...
[main-i386-default-job-04] | | `-- Installing libfmt-10.2.1...
[main-i386-default-job-04] | | `-- Extracting libfmt-10.2.1: .......... done
[main-i386-default-job-04] | | `-- Installing spdlog-1.14.1...
[main-i386-default-job-04] | | `-- Extracting spdlog-1.14.1: .......... done
[main-i386-default-job-04] | `-- Extracting level-zero-1.17.25: .......... done
[main-i386-default-job-04] | `-- Installing libpciaccess-0.18.1...
[main-i386-default-job-04] | `-- Extracting libpciaccess-0.18.1: ........ done
[main-i386-default-job-04] | `-- Installing libxml2-2.11.8...
[main-i386-default-job-04] | `-- Extracting libxml2-2.11.8: .......... done
[main-i386-default-job-04] `-- Extracting hwloc2-2.8.0_1: .......... done
[main-i386-default-job-04] `-- Installing pugixml-1.14...
[main-i386-default-job-04] `-- Extracting pugixml-1.14: .......... done
[main-i386-default-job-04] `-- Installing py311-svgwrite-1.4.3...
[main-i386-default-job-04] | `-- Installing py311-setuptools-63.1.0_1...
[main-i386-default-job-04] | `-- Extracting py311-setuptools-63.1.0_1: .......... done
[main-i386-default-job-04] `-- Extracting py311-svgwrite-1.4.3: .......... done
[main-i386-default-job-04] `-- Installing units-library-0.9.1.24...
[main-i386-default-job-04] `-- Extracting units-library-0.9.1.24: .......... done
[main-i386-default-job-04] Extracting arbor-0.10.1_1: .......... done
===> py311-arbor-0.10.1 depends on shared library: libarbor.so - found (/usr/local/lib/libarbor.so)
===> Returning to build of py311-arbor-0.10.1
===========================================================================
=======================<phase: configure >============================
===== env: NO_DEPENDS=yes USER=root UID=0 GID=0
===> Missing "gmake" to create a binary alias at "/wrkdirs/usr/ports/science/py-arbor/work-py311/.bin/make"
*** Error code 1
Stop.
make: stopped making "configure" in /usr/ports/science/py-arbor