[package - main-i386-default][science/precice] Failed for precice-2.5.1_2 in build
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Date: Tue, 05 Nov 2024 14:57:05 UTC
You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.
Maintainer: yuri@FreeBSD.org
Log URL: https://pkg-status.freebsd.org/beefy17/data/main-i386-default/p56a5011a0f1d_s4026b17bac6/logs/precice-2.5.1_2.log
Build URL: https://pkg-status.freebsd.org/beefy17/build.html?mastername=main-i386-default&build=p56a5011a0f1d_s4026b17bac6
Log:
=>> Building science/precice
build started at Tue Nov 5 14:51:31 UTC 2024
port directory: /usr/ports/science/precice
package name: precice-2.5.1_2
building for: FreeBSD main-i386-default-job-06 15.0-CURRENT FreeBSD 15.0-CURRENT 1500026 i386
maintained by: yuri@FreeBSD.org
Makefile datestamp: -rw-r--r-- 1 root wheel 1238 Oct 5 01:01 /usr/ports/science/precice/Makefile
Ports top last git commit: 56a5011a0f1
Ports top unclean checkout: no
Port dir last git commit: 55cfbcf56c3
Port dir unclean checkout: no
Poudriere version: poudriere-git-3.4.2
Host OSVERSION: 1500023
Jail OSVERSION: 1500026
Job Id: 06
!!! Jail is newer than host. (Jail: 1500026, Host: 1500023) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!
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---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
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---Begin OPTIONS List---
===> The following configuration options are available for precice-2.5.1_2:
EXAMPLES=on: Build and/or install examples
MPI=off: MPI (Message Passing Interface) support
PETSC=off: Use PETSc linear algebra library
===> Use 'make config' to modify these settings
---End OPTIONS List---
--MAINTAINER--
yuri@FreeBSD.org
--End MAINTAINER--
--CONFIGURE_ARGS--
--End CONFIGURE_ARGS--
--CONFIGURE_ENV--
PKG_CONFIG=pkgconf XDG_DATA_HOME=/wrkdirs/usr/ports/science/precice/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/precice/work XDG_CACHE_HOME=/wrkdirs/usr/ports/science/precice/work/.cache HOME=/wrkdirs/usr/ports/science/precice/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/precice/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/science/precice/work/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig SHELL=/bin/sh CONFIG_SHELL=/bin/sh
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--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/science/precice/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/precice/work XDG_CACHE_HOME=/wrkdirs/usr/ports/science/precice/work/.cache HOME=/wrkdirs/usr/ports/science/precice/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/precice/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/science/precice/work/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES PREFIX=/usr/local LOCALBASE=/usr/local CC="cc" CFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " CPP="cpp" CPPFLAGS="" LDFLAGS=" -fstack-protector-strong " LIBS="" CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644"
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--End PLIST_SUB--
--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/precice DOCSDIR=/usr/local/share/doc/precice EXAMPLESDIR=/usr/local/share/examples/precice WWWDIR=/usr/local/www/precice ETCDIR=/usr/local/etc/precice
--End SUB_LIST--
---Begin make.conf---
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure. It currently retries the same
# failed mirror and then fails rather then trying another. It *does*
# try the next if the size is mismatched though.
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MACHINE=i386
MACHINE_ARCH=i386
ARCH=${MACHINE_ARCH}
#### ####
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure. It currently retries the same
# failed mirror and then fails rather then trying another. It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 3 jobs
MAKE_JOBS_NUMBER=3
#### Misc Poudriere ####
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---End make.conf---
--Resource limits--
ulimit: can't get limit: Invalid argument
cpu time (seconds, -t) unlimited
file size (512-blocks, -f) unlimited
data seg size (kbytes, -d) 524288
stack size (kbytes, -s) 65536
core file size (512-blocks, -c) unlimited
max memory size (kbytes, -m) unlimited
locked memory (kbytes, -l) unlimited
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kqueues (-k) unlimited
umtx shared locks (-o) unlimited
--End resource limits--
=======================<phase: check-sanity >============================
===== env: NO_DEPENDS=yes USER=root UID=0 GID=0
===> License LGPL3 accepted by the user
===========================================================================
=======================<phase: pkg-depends >============================
===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0
===> precice-2.5.1_2 depends on file: /usr/local/sbin/pkg - not found
===> Installing existing package /packages/All/pkg-1.21.3.pkg
[main-i386-default-job-06] Installing pkg-1.21.3...
[main-i386-default-job-06] Extracting pkg-1.21.3: .......... done
===> precice-2.5.1_2 depends on file: /usr/local/sbin/pkg - found
===> Returning to build of precice-2.5.1_2
===========================================================================
=======================<phase: fetch-depends >============================
===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0
===========================================================================
=======================<phase: fetch >============================
===== env: NO_DEPENDS=yes USER=root UID=0 GID=0
===> License LGPL3 accepted by the user
===> Fetching all distfiles required by precice-2.5.1_2 for building
===========================================================================
=======================<phase: checksum >============================
===== env: NO_DEPENDS=yes USER=root UID=0 GID=0
===> License LGPL3 accepted by the user
===> Fetching all distfiles required by precice-2.5.1_2 for building
=> SHA256 Checksum OK for precice-precice-v2.5.1_GH0.tar.gz.
===========================================================================
=======================<phase: extract-depends>============================
===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0
===========================================================================
=======================<phase: extract >============================
===== env: NO_DEPENDS=yes USER=root UID=0 GID=0
===> License LGPL3 accepted by the user
===> Fetching all distfiles required by precice-2.5.1_2 for building
===> Extracting for precice-2.5.1_2
=> SHA256 Checksum OK for precice-precice-v2.5.1_GH0.tar.gz.
===========================================================================
=======================<phase: patch-depends >============================
===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0
===========================================================================
=======================<phase: patch >============================
===== env: NO_DEPENDS=yes USER=root UID=0 GID=0
===> Patching for precice-2.5.1_2
===> Applying FreeBSD patches for precice-2.5.1_2 from /usr/ports/science/precice/files
===========================================================================
<snip>
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[ 50%] Building CXX object CMakeFiles/precice.dir/src/m2n/BoundM2N.cpp.o
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[ 51%] Building CXX object CMakeFiles/precice.dir/src/m2n/GatherScatterComFactory.cpp.o
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[ 54%] Building CXX object CMakeFiles/precice.dir/src/m2n/PointToPointCommunication.cpp.o
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--- CMakeFiles/precice.dir/src/m2n/config/M2NConfiguration.cpp.o ---
[ 55%] Building CXX object CMakeFiles/precice.dir/src/m2n/config/M2NConfiguration.cpp.o
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--- CMakeFiles/precice.dir/src/mapping/BarycentricBaseMapping.cpp.o ---
[ 55%] Building CXX object CMakeFiles/precice.dir/src/mapping/BarycentricBaseMapping.cpp.o
/usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ASIO_ENABLE_OLD_SERVICES -DBOOST_GEOMETRY_DISABLE_DEPRECATED_03_WARNING -DFMT_HEADER_ONLY=1 -DPRECICE_NO_MPI -DPRECICE_NO_PETSC -DPRECICE_NO_PYTHON -D_GNU_SOURCE -Dprecice_EXPORTS -I/wrkdirs/usr/ports/science/precice/work/precice-2.5.1/src -I/wrkdirs/usr/ports/science/precice/work/.build/src -I/wrkdirs/usr/ports/science/precice/work/precice-2.5.1/extras/bindings/c/include -isystem /usr/local/include -isystem /usr/local/include/eigen3 -isystem /usr/local/include/libxml2 -isystem /wrkdirs/usr/ports/science/precice/work/precice-2.5.1/thirdparty/json/include -isystem /wrkdirs/usr/ports/science/precice/work/precice-2.5.1/thirdparty/fmt/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -DNDEBUG -std=c++14 -fPIC -pthread -MD -MT CMakeFiles/precice.dir/src/mapping/BarycentricBaseMapping.cpp.o -MF CMakeFiles/precice.dir/src/mapping/BarycentricBaseMapping.cpp.o.d -o CMakeF
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--- CMakeFiles/precice.dir/src/mapping/LinearCellInterpolationMapping.cpp.o ---
[ 56%] Building CXX object CMakeFiles/precice.dir/src/mapping/LinearCellInterpolationMapping.cpp.o
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/Polation.cpp.o -c /wrkdirs/usr/ports/science/precice/work/precice-2.5.1/src/mapping/Polation.cpp
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.cpp.o -c /wrkdirs/usr/ports/science/precice/work/precice-2.5.1/src/math/geometry.cpp
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trahedron.cpp.o -c /wrkdirs/usr/ports/science/precice/work/precice-2.5.1/src/mesh/Tetrahedron.cpp
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.cpp.o -c /wrkdirs/usr/ports/science/precice/work/precice-2.5.1/src/mesh/Triangle.cpp
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artition/Partition.cpp.o -c /wrkdirs/usr/ports/science/precice/work/precice-2.5.1/src/partition/Partition.cpp
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recice.dir/src/partition/ReceivedPartition.cpp.o -c /wrkdirs/usr/ports/science/precice/work/precice-2.5.1/src/partition/ReceivedPartition.cpp
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--- CMakeFiles/precice.dir/src/utils/ManageUniqueIDs.cpp.o ---
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/usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ASIO_ENABLE_OLD_SERVICES -DBOOST_GEOMETRY_DISABLE_DEPRECATED_03_WARNING -DFMT_HEADER_ONLY=1 -DPRECICE_NO_MPI -DPRECICE_NO_PETSC -DPRECICE_NO_PYTHON -D_GNU_SOURCE -Dprecice_EXPORTS -I/wrkdirs/usr/ports/science/precice/work/precice-2.5.1/src -I/wrkdirs/usr/ports/science/precice/work/.build/src -I/wrkdirs/usr/ports/science/precice/work/precice-2.5.1/extras/bindings/c/include -isystem /usr/local/include -isystem /usr/local/include/eigen3 -isystem /usr/local/include/libxml2 -isystem /wrkdirs/usr/ports/science/precice/work/precice-2.5.1/thirdparty/json/include -isystem /wrkdirs/usr/ports/science/precice/work/precice-2.5.1/thirdparty/fmt/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -DNDEBUG -std=c++14 -fPIC -pthread -MD -MT CMakeFiles/precice.dir/src/utils/ManageUniqueIDs.cpp.o -MF CMakeFiles/precice.dir/src/utils/ManageUniqueIDs.cpp.o.d -o CMakeFiles/precice.dir/s
rc/utils/ManageUniqueIDs.cpp.o -c /wrkdirs/usr/ports/science/precice/work/precice-2.5.1/src/utils/ManageUniqueIDs.cpp
In file included from /wrkdirs/usr/ports/science/precice/work/precice-2.5.1/src/utils/ManageUniqueIDs.cpp:1:
In file included from /wrkdirs/usr/ports/science/precice/work/precice-2.5.1/src/utils/ManageUniqueIDs.hpp:3:
In file included from /usr/local/include/boost/container/flat_set.hpp:29:
In file included from /usr/local/include/boost/container/detail/flat_tree.hpp:29:
In file included from /usr/local/include/boost/container/detail/pair.hpp:36:
/usr/local/include/boost/move/adl_move_swap.hpp:190:15: error: no member named 'swap' in namespace 'std'
190 | using std::swap;
| ~~~~~^
--- CMakeFiles/precice.dir/src/utils/Parallel.cpp.o ---
[ 90%] Building CXX object CMakeFiles/precice.dir/src/utils/Parallel.cpp.o
/usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ASIO_ENABLE_OLD_SERVICES -DBOOST_GEOMETRY_DISABLE_DEPRECATED_03_WARNING -DFMT_HEADER_ONLY=1 -DPRECICE_NO_MPI -DPRECICE_NO_PETSC -DPRECICE_NO_PYTHON -D_GNU_SOURCE -Dprecice_EXPORTS -I/wrkdirs/usr/ports/science/precice/work/precice-2.5.1/src -I/wrkdirs/usr/ports/science/precice/work/.build/src -I/wrkdirs/usr/ports/science/precice/work/precice-2.5.1/extras/bindings/c/include -isystem /usr/local/include -isystem /usr/local/include/eigen3 -isystem /usr/local/include/libxml2 -isystem /wrkdirs/usr/ports/science/precice/work/precice-2.5.1/thirdparty/json/include -isystem /wrkdirs/usr/ports/science/precice/work/precice-2.5.1/thirdparty/fmt/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -DNDEBUG -std=c++14 -fPIC -pthread -MD -MT CMakeFiles/precice.dir/src/utils/Parallel.cpp.o -MF CMakeFiles/precice.dir/src/utils/Parallel.cpp.o.d -o CMakeFiles/precice.dir/src/utils/Paral
lel.cpp.o -c /wrkdirs/usr/ports/science/precice/work/precice-2.5.1/src/utils/Parallel.cpp
--- CMakeFiles/precice.dir/src/utils/ManageUniqueIDs.cpp.o ---
1 error generated.
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make: stopped making "all" in /wrkdirs/usr/ports/science/precice/work/.build
===> Compilation failed unexpectedly.
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the maintainer.
*** Error code 1
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