[package - 140i386-default][science/octopus] Failed for octopus-13.0_3 in build
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Date: Sun, 21 Jul 2024 09:39:23 UTC
You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.
Maintainer: yuri@FreeBSD.org
Log URL: https://pkg-status.freebsd.org/beefy21/data/140i386-default/277713224be0/logs/octopus-13.0_3.log
Build URL: https://pkg-status.freebsd.org/beefy21/build.html?mastername=140i386-default&build=277713224be0
Log:
=>> Building science/octopus
build started at Sun Jul 21 09:35:54 UTC 2024
port directory: /usr/ports/science/octopus
package name: octopus-13.0_3
building for: FreeBSD 140i386-default-job-30 14.0-RELEASE-p8 FreeBSD 14.0-RELEASE-p8 i386
maintained by: yuri@FreeBSD.org
Makefile datestamp: -rw-r--r-- 1 root wheel 2199 Jul 11 01:01 /usr/ports/science/octopus/Makefile
Ports top last git commit: 277713224b
Ports top unclean checkout: no
Port dir last git commit: 0056775fb9
Port dir unclean checkout: no
Poudriere version: poudriere-git-3.4.1-30-g79e3edcd
Host OSVERSION: 1500019
Jail OSVERSION: 1400097
Job Id: 30
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---End Environment---
---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
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---End Poudriere Port Flags/Env---
---Begin OPTIONS List---
===> The following configuration options are available for octopus-13.0_3:
OPENMP=on: Parallel processing support via OpenMP
===> Use 'make config' to modify these settings
---End OPTIONS List---
--MAINTAINER--
yuri@FreeBSD.org
--End MAINTAINER--
--CONFIGURE_ARGS--
--enable-shared --disable-static --enable-openmp --prefix=/usr/local ${_LATE_CONFIGURE_ARGS}
--End CONFIGURE_ARGS--
--CONFIGURE_ENV--
F77="gfortran13" F90="gfortran13" FC="gfortran13" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc13" F90FLAGS="-O -Wl,-rpath=/usr/local/lib/gcc13" FCFLAGS="-I/usr/local/include -ffree-line-length-none -fallow-argument-mismatch -Wl,-rpath=/usr/local/lib/gcc13 -fallow-argument-mismatch -fallow-invalid-boz" MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl ac_cv_path_PERL_PATH=/usr/local/bin/perl PERL_USE_UNSAFE_INC=1 PYTHON="/usr/local/bin/python3.11" XDG_DATA_HOME=/wrkdirs/usr/ports/science/octopus/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/octopus/work XDG_CACHE_HOME=/wrkdirs/usr/ports/science/octopus/work/.cache HOME=/wrkdirs/usr/ports/science/octopus/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/octopus/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/science/octopus/work/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig SHELL=/usr/local/bin/bash CONFIG_SHELL=/
usr/local/bin/bash ADDR2LINE="/usr/local/bin/addr2line" AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" CMAKE_PREFIX_PATH="/usr/local" CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288
--End CONFIGURE_ENV--
--MAKE_ENV--
F77="gfortran13" F90="gfortran13" FC="gfortran13" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc13" F90FLAGS="-O -Wl,-rpath=/usr/local/lib/gcc13" FCFLAGS="-I/usr/local/include -ffree-line-length-none -fallow-argument-mismatch -Wl,-rpath=/usr/local/lib/gcc13 -fallow-argument-mismatch -fallow-invalid-boz" PERL_USE_UNSAFE_INC=1 XDG_DATA_HOME=/wrkdirs/usr/ports/science/octopus/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/octopus/work XDG_CACHE_HOME=/wrkdirs/usr/ports/science/octopus/work/.cache HOME=/wrkdirs/usr/ports/science/octopus/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/octopus/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/science/octopus/work/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES ADDR2LINE="/usr/local/bin/addr2line" AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/lo
cal/bin/c++filt" GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" PREFIX=/usr/local LOCALBASE=/usr/local CC="cc" CFLAGS="-O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing " CPP="cpp" CPPFLAGS="-isystem /usr/local/include" LDFLAGS=" -lsymspg -Wl,-rpath=/usr/local/lib/gcc13 -L/usr/local/lib/gcc13 -fstack-protector-strong -L/usr/local/lib " LIBS="" CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include -std=c++14 " BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444"
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--End PLIST_SUB--
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PYTHON_INCLUDEDIR=/usr/local/include/python3.11 PYTHON_LIBDIR=/usr/local/lib/python3.11 PYTHON_PLATFORM=freebsd14 PYTHON_SITELIBDIR=/usr/local/lib/python3.11/site-packages PYTHON_SUFFIX=311 PYTHON_EXT_SUFFIX=.cpython-311 PYTHON_VER=3.11 PYTHON_VERSION=python3.11 PYTHON2="@comment " PYTHON3="" PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/octopus DOCSDIR=/usr/local/share/doc/octopus EXAMPLESDIR=/usr/local/share/examples/octopus WWWDIR=/usr/local/www/octopus ETCDIR=/usr/local/etc/octopus
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MACHINE=i386
MACHINE_ARCH=i386
ARCH=${MACHINE_ARCH}
#### ####
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure. It currently retries the same
# failed mirror and then fails rather then trying another. It *does*
# try the next if the size is mismatched though.
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MAKE_JOBS_NUMBER=3
#### Misc Poudriere ####
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GID=0
UID=0
DISABLE_MAKE_JOBS=poudriere
---End make.conf---
--Resource limits--
cpu time (seconds, -t) unlimited
file size (512-blocks, -f) unlimited
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stack size (kbytes, -s) 65536
core file size (512-blocks, -c) unlimited
max memory size (kbytes, -m) unlimited
locked memory (kbytes, -l) unlimited
max user processes (-u) 89999
open files (-n) 8192
virtual mem size (kbytes, -v) unlimited
swap limit (kbytes, -w) unlimited
socket buffer size (bytes, -b) unlimited
pseudo-terminals (-p) unlimited
kqueues (-k) unlimited
umtx shared locks (-o) unlimited
--End resource limits--
=======================<phase: check-sanity >============================
===== env: NO_DEPENDS=yes USER=root UID=0 GID=0
===> License GPLv2 accepted by the user
===========================================================================
=======================<phase: pkg-depends >============================
===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0
===> octopus-13.0_3 depends on file: /usr/local/sbin/pkg - not found
===> Installing existing package /packages/All/pkg-1.21.3.pkg
[140i386-default-job-30] Installing pkg-1.21.3...
[140i386-default-job-30] Extracting pkg-1.21.3: .......... done
===> octopus-13.0_3 depends on file: /usr/local/sbin/pkg - found
===> Returning to build of octopus-13.0_3
===========================================================================
=======================<phase: fetch-depends >============================
===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0
===========================================================================
=======================<phase: fetch >============================
===== env: NO_DEPENDS=yes USER=root UID=0 GID=0
===> License GPLv2 accepted by the user
===> Fetching all distfiles required by octopus-13.0_3 for building
===========================================================================
=======================<phase: checksum >============================
===== env: NO_DEPENDS=yes USER=root UID=0 GID=0
===> License GPLv2 accepted by the user
===> Fetching all distfiles required by octopus-13.0_3 for building
=> SHA256 Checksum OK for octopus-13.0.tar.gz.
===========================================================================
=======================<phase: extract-depends>============================
===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0
===========================================================================
=======================<phase: extract >============================
===== env: NO_DEPENDS=yes USER=root UID=0 GID=0
===> License GPLv2 accepted by the user
===> Fetching all distfiles required by octopus-13.0_3 for building
===> Extracting for octopus-13.0_3
=> SHA256 Checksum OK for octopus-13.0.tar.gz.
===========================================================================
=======================<phase: patch-depends >============================
===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0
===========================================================================
=======================<phase: patch >============================
===== env: NO_DEPENDS=yes USER=root UID=0 GID=0
===> Patching for octopus-13.0_3
===> Applying FreeBSD patches for octopus-13.0_3 from /usr/ports/science/octopus/files
===========================================================================
=======================<phase: build-depends >============================
===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0
===> octopus-13.0_3 depends on executable: bash - not found
===> Installing existing package /packages/All/bash-5.2.26_1.pkg
[140i386-default-job-30] Installing bash-5.2.26_1...
[140i386-default-job-30] `-- Installing gettext-runtime-0.22.5...
[140i386-default-job-30] | `-- Installing indexinfo-0.3.1...
[140i386-default-job-30] | `-- Extracting indexinfo-0.3.1: .... done
[140i386-default-job-30] `-- Extracting gettext-runtime-0.22.5: .......... done
[140i386-default-job-30] `-- Installing readline-8.2.10...
[140i386-default-job-30] `-- Extracting readline-8.2.10: .......... done
[140i386-default-job-30] Extracting bash-5.2.26_1: .......... done
===> octopus-13.0_3 depends on executable: bash - found
===> Returning to build of octopus-13.0_3
===> octopus-13.0_3 depends on executable: gfortran13 - not found
===> Installing existing package /packages/All/gcc13-13.2.0_4.pkg
[140i386-default-job-30] Installing gcc13-13.2.0_4...
[140i386-default-job-30] `-- Installing binutils-2.40_5,1...
[140i386-default-job-30] | `-- Installing zstd-1.5.6...
<snip>
../scripts/preprocess.pl - \
"" "yes" > basic/parser_oct.f90
/usr/local/bin/bash ../libtool --tag=FC \
--mode=compile \
gfortran13 -I/usr/local/include -ffree-line-length-none -fallow-argument-mismatch -Wl,-rpath=/usr/local/lib/gcc13 -fallow-argument-mismatch -fallow-invalid-boz -fopenmp -I ../external_libs/bpdn -I ../external_libs/dftd3 -I /usr/include -I/usr/include -I/usr/include -I /usr/include -c -o basic/parser.lo basic/parser_oct.f90
libtool: compile: gfortran13 -I/usr/local/include -ffree-line-length-none -fallow-argument-mismatch -Wl,-rpath=/usr/local/lib/gcc13 -fallow-argument-mismatch -fallow-invalid-boz -fopenmp -I ../external_libs/bpdn -I ../external_libs/dftd3 -I /usr/include -I/usr/include -I/usr/include -I /usr/include -c basic/parser_oct.f90 -fPIC -o basic/.libs/parser.o
cpp -x c -ansi -isystem /usr/local/include -I../src/include -I../src/include -I../liboct_parser -I/usr/local/include -I/usr/local/include -I/usr/include -DSHARE_DIR='"/usr/local/share/octopus"' -I. basic/debug.F90 | \
../scripts/preprocess.pl - \
"" "yes" > basic/debug_oct.f90
/usr/local/bin/bash ../libtool --tag=FC \
--mode=compile \
gfortran13 -I/usr/local/include -ffree-line-length-none -fallow-argument-mismatch -Wl,-rpath=/usr/local/lib/gcc13 -fallow-argument-mismatch -fallow-invalid-boz -fopenmp -I ../external_libs/bpdn -I ../external_libs/dftd3 -I /usr/include -I/usr/include -I/usr/include -I /usr/include -c -o basic/debug.lo basic/debug_oct.f90
libtool: compile: gfortran13 -I/usr/local/include -ffree-line-length-none -fallow-argument-mismatch -Wl,-rpath=/usr/local/lib/gcc13 -fallow-argument-mismatch -fallow-invalid-boz -fopenmp -I ../external_libs/bpdn -I ../external_libs/dftd3 -I /usr/include -I/usr/include -I/usr/include -I /usr/include -c basic/debug_oct.f90 -fPIC -o basic/.libs/debug.o
cpp -x c -ansi -isystem /usr/local/include -I../src/include -I../src/include -I../liboct_parser -I/usr/local/include -I/usr/local/include -I/usr/include -DSHARE_DIR='"/usr/local/share/octopus"' -I. basic/sihash.F90 | \
../scripts/preprocess.pl - \
"" "yes" > basic/sihash_oct.f90
/usr/local/bin/bash ../libtool --tag=FC \
--mode=compile \
gfortran13 -I/usr/local/include -ffree-line-length-none -fallow-argument-mismatch -Wl,-rpath=/usr/local/lib/gcc13 -fallow-argument-mismatch -fallow-invalid-boz -fopenmp -I ../external_libs/bpdn -I ../external_libs/dftd3 -I /usr/include -I/usr/include -I/usr/include -I /usr/include -c -o basic/sihash.lo basic/sihash_oct.f90
libtool: compile: gfortran13 -I/usr/local/include -ffree-line-length-none -fallow-argument-mismatch -Wl,-rpath=/usr/local/lib/gcc13 -fallow-argument-mismatch -fallow-invalid-boz -fopenmp -I ../external_libs/bpdn -I ../external_libs/dftd3 -I /usr/include -I/usr/include -I/usr/include -I /usr/include -c basic/sihash_oct.f90 -fPIC -o basic/.libs/sihash.o
cpp -x c -ansi -isystem /usr/local/include -I../src/include -I../src/include -I../liboct_parser -I/usr/local/include -I/usr/local/include -I/usr/include -DSHARE_DIR='"/usr/local/share/octopus"' -I. basic/io.F90 | \
../scripts/preprocess.pl - \
"" "yes" > basic/io_oct.f90
/usr/local/bin/bash ../libtool --tag=FC \
--mode=compile \
gfortran13 -I/usr/local/include -ffree-line-length-none -fallow-argument-mismatch -Wl,-rpath=/usr/local/lib/gcc13 -fallow-argument-mismatch -fallow-invalid-boz -fopenmp -I ../external_libs/bpdn -I ../external_libs/dftd3 -I /usr/include -I/usr/include -I/usr/include -I /usr/include -c -o basic/io.lo basic/io_oct.f90
libtool: compile: gfortran13 -I/usr/local/include -ffree-line-length-none -fallow-argument-mismatch -Wl,-rpath=/usr/local/lib/gcc13 -fallow-argument-mismatch -fallow-invalid-boz -fopenmp -I ../external_libs/bpdn -I ../external_libs/dftd3 -I /usr/include -I/usr/include -I/usr/include -I /usr/include -c basic/io_oct.f90 -fPIC -o basic/.libs/io.o
cpp -x c -ansi -isystem /usr/local/include -I../src/include -I../src/include -I../liboct_parser -I/usr/local/include -I/usr/local/include -I/usr/include -DSHARE_DIR='"/usr/local/share/octopus"' -I. basic/messages.F90 | \
../scripts/preprocess.pl - \
"" "yes" > basic/messages_oct.f90
basic/messages.F90:188:22: warning: empty character constant [-Winvalid-pp-token]
message(1) = ''
^
basic/messages.F90:262:23: warning: empty character constant [-Winvalid-pp-token]
call io_mkdir('', namespace)
^
basic/messages.F90:470:22: warning: empty character constant [-Winvalid-pp-token]
call flush_msg('', stderr)
^
basic/messages.F90:472:24: warning: empty character constant [-Winvalid-pp-token]
call flush_msg('', iunit_namespace)
^
basic/messages.F90:504:22: warning: empty character constant [-Winvalid-pp-token]
call flush_msg('', stderr)
^
basic/messages.F90:506:24: warning: empty character constant [-Winvalid-pp-token]
call flush_msg('', iunit_namespace)
^
basic/messages.F90:861:13: warning: empty character constant [-Winvalid-pp-token]
str = ''
^
basic/messages.F90:885:22: warning: empty character constant [-Winvalid-pp-token]
call flush_msg('', iunit_) ! empty line
^
basic/messages.F90:893:22: warning: empty character constant [-Winvalid-pp-token]
call flush_msg('', iunit_) ! empty line
^
basic/messages.F90:1164:18: warning: empty character constant [-Winvalid-pp-token]
message(1) = ''
^
basic/messages.F90:1172:29: warning: empty character constant [-Winvalid-pp-token]
message(current_line) = ''
^
basic/messages.F90:1344:26: warning: empty character constant [-Winvalid-pp-token]
write(msg, '(a,i2)') ''
^
basic/messages.F90:1348:26: warning: empty character constant [-Winvalid-pp-token]
write(msg, '(a,i2)') ''
^
basic/messages.F90:1352:26: warning: empty character constant [-Winvalid-pp-token]
write(msg, '(a,i2)') ''
^
basic/messages.F90:1360:26: warning: empty character constant [-Winvalid-pp-token]
write(msg, '(a,i2)') ''
^
15 warnings generated.
/usr/local/bin/bash ../libtool --tag=FC \
--mode=compile \
gfortran13 -I/usr/local/include -ffree-line-length-none -fallow-argument-mismatch -Wl,-rpath=/usr/local/lib/gcc13 -fallow-argument-mismatch -fallow-invalid-boz -fopenmp -I ../external_libs/bpdn -I ../external_libs/dftd3 -I /usr/include -I/usr/include -I/usr/include -I /usr/include -c -o basic/messages.lo basic/messages_oct.f90
libtool: compile: gfortran13 -I/usr/local/include -ffree-line-length-none -fallow-argument-mismatch -Wl,-rpath=/usr/local/lib/gcc13 -fallow-argument-mismatch -fallow-invalid-boz -fopenmp -I ../external_libs/bpdn -I ../external_libs/dftd3 -I /usr/include -I/usr/include -I/usr/include -I /usr/include -c basic/messages_oct.f90 -fPIC -o basic/.libs/messages.o
cpp -x c -ansi -isystem /usr/local/include -I../src/include -I../src/include -I../liboct_parser -I/usr/local/include -I/usr/local/include -I/usr/include -DSHARE_DIR='"/usr/local/share/octopus"' -I. basic/walltimer.F90 | \
../scripts/preprocess.pl - \
"" "yes" > basic/walltimer_oct.f90
/usr/local/bin/bash ../libtool --tag=FC \
--mode=compile \
gfortran13 -I/usr/local/include -ffree-line-length-none -fallow-argument-mismatch -Wl,-rpath=/usr/local/lib/gcc13 -fallow-argument-mismatch -fallow-invalid-boz -fopenmp -I ../external_libs/bpdn -I ../external_libs/dftd3 -I /usr/include -I/usr/include -I/usr/include -I /usr/include -c -o basic/walltimer.lo basic/walltimer_oct.f90
libtool: compile: gfortran13 -I/usr/local/include -ffree-line-length-none -fallow-argument-mismatch -Wl,-rpath=/usr/local/lib/gcc13 -fallow-argument-mismatch -fallow-invalid-boz -fopenmp -I ../external_libs/bpdn -I ../external_libs/dftd3 -I /usr/include -I/usr/include -I/usr/include -I /usr/include -c basic/walltimer_oct.f90 -fPIC -o basic/.libs/walltimer.o
cpp -x c -ansi -isystem /usr/local/include -I../src/include -I../src/include -I../liboct_parser -I/usr/local/include -I/usr/local/include -I/usr/include -DSHARE_DIR='"/usr/local/share/octopus"' -I. basic/sort.F90 | \
../scripts/preprocess.pl - \
"" "yes" > basic/sort_oct.f90
/usr/local/bin/bash ../libtool --tag=FC \
--mode=compile \
gfortran13 -I/usr/local/include -ffree-line-length-none -fallow-argument-mismatch -Wl,-rpath=/usr/local/lib/gcc13 -fallow-argument-mismatch -fallow-invalid-boz -fopenmp -I ../external_libs/bpdn -I ../external_libs/dftd3 -I /usr/include -I/usr/include -I/usr/include -I /usr/include -c -o basic/sort.lo basic/sort_oct.f90
libtool: compile: gfortran13 -I/usr/local/include -ffree-line-length-none -fallow-argument-mismatch -Wl,-rpath=/usr/local/lib/gcc13 -fallow-argument-mismatch -fallow-invalid-boz -fopenmp -I ../external_libs/bpdn -I ../external_libs/dftd3 -I /usr/include -I/usr/include -I/usr/include -I /usr/include -c basic/sort_oct.f90 -fPIC -o basic/.libs/sort.o
cpp -x c -ansi -isystem /usr/local/include -I../src/include -I../src/include -I../liboct_parser -I/usr/local/include -I/usr/local/include -I/usr/include -DSHARE_DIR='"/usr/local/share/octopus"' -I. basic/types.F90 | \
../scripts/preprocess.pl - \
"" "yes" > basic/types_oct.f90
/usr/local/bin/bash ../libtool --tag=FC \
--mode=compile \
gfortran13 -I/usr/local/include -ffree-line-length-none -fallow-argument-mismatch -Wl,-rpath=/usr/local/lib/gcc13 -fallow-argument-mismatch -fallow-invalid-boz -fopenmp -I ../external_libs/bpdn -I ../external_libs/dftd3 -I /usr/include -I/usr/include -I/usr/include -I /usr/include -c -o basic/types.lo basic/types_oct.f90
libtool: compile: gfortran13 -I/usr/local/include -ffree-line-length-none -fallow-argument-mismatch -Wl,-rpath=/usr/local/lib/gcc13 -fallow-argument-mismatch -fallow-invalid-boz -fopenmp -I ../external_libs/bpdn -I ../external_libs/dftd3 -I /usr/include -I/usr/include -I/usr/include -I /usr/include -c basic/types_oct.f90 -fPIC -o basic/.libs/types.o
cpp -x c -ansi -isystem /usr/local/include -I../src/include -I../src/include -I../liboct_parser -I/usr/local/include -I/usr/local/include -I/usr/include -DSHARE_DIR='"/usr/local/share/octopus"' -I. basic/nvtx.F90 | \
../scripts/preprocess.pl - \
"" "yes" > basic/nvtx_oct.f90
/usr/local/bin/bash ../libtool --tag=FC \
--mode=compile \
gfortran13 -I/usr/local/include -ffree-line-length-none -fallow-argument-mismatch -Wl,-rpath=/usr/local/lib/gcc13 -fallow-argument-mismatch -fallow-invalid-boz -fopenmp -I ../external_libs/bpdn -I ../external_libs/dftd3 -I /usr/include -I/usr/include -I/usr/include -I /usr/include -c -o basic/nvtx.lo basic/nvtx_oct.f90
libtool: compile: gfortran13 -I/usr/local/include -ffree-line-length-none -fallow-argument-mismatch -Wl,-rpath=/usr/local/lib/gcc13 -fallow-argument-mismatch -fallow-invalid-boz -fopenmp -I ../external_libs/bpdn -I ../external_libs/dftd3 -I /usr/include -I/usr/include -I/usr/include -I /usr/include -c basic/nvtx_oct.f90 -fPIC -o basic/.libs/nvtx.o
cpp -x c -ansi -isystem /usr/local/include -I../src/include -I../src/include -I../liboct_parser -I/usr/local/include -I/usr/local/include -I/usr/include -DSHARE_DIR='"/usr/local/share/octopus"' -I. basic/profiling.F90 | \
../scripts/preprocess.pl - \
"" "yes" > basic/profiling_oct.f90
basic/profiling.F90:272:39: warning: empty character constant [-Winvalid-pp-token]
prof_vars%max_memory_location = ''
^
basic/profiling.F90:276:33: warning: empty character constant [-Winvalid-pp-token]
prof_vars%large_vars(:) = ''
^
basic/profiling.F90:380:20: warning: empty character constant [-Winvalid-pp-token]
message(1) = ''
^
3 warnings generated.
/usr/local/bin/bash ../libtool --tag=FC \
--mode=compile \
gfortran13 -I/usr/local/include -ffree-line-length-none -fallow-argument-mismatch -Wl,-rpath=/usr/local/lib/gcc13 -fallow-argument-mismatch -fallow-invalid-boz -fopenmp -I ../external_libs/bpdn -I ../external_libs/dftd3 -I /usr/include -I/usr/include -I/usr/include -I /usr/include -c -o basic/profiling.lo basic/profiling_oct.f90
libtool: compile: gfortran13 -I/usr/local/include -ffree-line-length-none -fallow-argument-mismatch -Wl,-rpath=/usr/local/lib/gcc13 -fallow-argument-mismatch -fallow-invalid-boz -fopenmp -I ../external_libs/bpdn -I ../external_libs/dftd3 -I /usr/include -I/usr/include -I/usr/include -I /usr/include -c basic/profiling_oct.f90 -fPIC -o basic/.libs/profiling.o
cpp -x c -ansi -isystem /usr/local/include -I../src/include -I../src/include -I../liboct_parser -I/usr/local/include -I/usr/local/include -I/usr/include -DSHARE_DIR='"/usr/local/share/octopus"' -I. basic/alloc_cache.F90 | \
../scripts/preprocess.pl - \
"" "yes" > basic/alloc_cache_oct.f90
/usr/local/bin/bash ../libtool --tag=FC \
--mode=compile \
gfortran13 -I/usr/local/include -ffree-line-length-none -fallow-argument-mismatch -Wl,-rpath=/usr/local/lib/gcc13 -fallow-argument-mismatch -fallow-invalid-boz -fopenmp -I ../external_libs/bpdn -I ../external_libs/dftd3 -I /usr/include -I/usr/include -I/usr/include -I /usr/include -c -o basic/alloc_cache.lo basic/alloc_cache_oct.f90
libtool: compile: gfortran13 -I/usr/local/include -ffree-line-length-none -fallow-argument-mismatch -Wl,-rpath=/usr/local/lib/gcc13 -fallow-argument-mismatch -fallow-invalid-boz -fopenmp -I ../external_libs/bpdn -I ../external_libs/dftd3 -I /usr/include -I/usr/include -I/usr/include -I /usr/include -c basic/alloc_cache_oct.f90 -fPIC -o basic/.libs/alloc_cache.o
cpp -x c -ansi -isystem /usr/local/include -I../src/include -I../src/include -I../liboct_parser -I/usr/local/include -I/usr/local/include -I/usr/include -DSHARE_DIR='"/usr/local/share/octopus"' -I. basic/cuda.F90 | \
../scripts/preprocess.pl - \
"" "yes" > basic/cuda_oct.f90
/usr/local/bin/bash ../libtool --tag=FC \
--mode=compile \
gfortran13 -I/usr/local/include -ffree-line-length-none -fallow-argument-mismatch -Wl,-rpath=/usr/local/lib/gcc13 -fallow-argument-mismatch -fallow-invalid-boz -fopenmp -I ../external_libs/bpdn -I ../external_libs/dftd3 -I /usr/include -I/usr/include -I/usr/include -I /usr/include -c -o basic/cuda.lo basic/cuda_oct.f90
libtool: compile: gfortran13 -I/usr/local/include -ffree-line-length-none -fallow-argument-mismatch -Wl,-rpath=/usr/local/lib/gcc13 -fallow-argument-mismatch -fallow-invalid-boz -fopenmp -I ../external_libs/bpdn -I ../external_libs/dftd3 -I /usr/include -I/usr/include -I/usr/include -I /usr/include -c basic/cuda_oct.f90 -fPIC -o basic/.libs/cuda.o
cpp -x c -ansi -isystem /usr/local/include -I../src/include -I../src/include -I../liboct_parser -I/usr/local/include -I/usr/local/include -I/usr/include -DSHARE_DIR='"/usr/local/share/octopus"' -I. basic/unit_system.F90 | \
../scripts/preprocess.pl - \
"" "yes" > basic/unit_system_oct.f90
/usr/local/bin/bash ../libtool --tag=FC \
--mode=compile \
gfortran13 -I/usr/local/include -ffree-line-length-none -fallow-argument-mismatch -Wl,-rpath=/usr/local/lib/gcc13 -fallow-argument-mismatch -fallow-invalid-boz -fopenmp -I ../external_libs/bpdn -I ../external_libs/dftd3 -I /usr/include -I/usr/include -I/usr/include -I /usr/include -c -o basic/unit_system.lo basic/unit_system_oct.f90
libtool: compile: gfortran13 -I/usr/local/include -ffree-line-length-none -fallow-argument-mismatch -Wl,-rpath=/usr/local/lib/gcc13 -fallow-argument-mismatch -fallow-invalid-boz -fopenmp -I ../external_libs/bpdn -I ../external_libs/dftd3 -I /usr/include -I/usr/include -I/usr/include -I /usr/include -c basic/unit_system_oct.f90 -fPIC -o basic/.libs/unit_system.o
cpp -x c -ansi -isystem /usr/local/include -I../src/include -I../src/include -I../liboct_parser -I/usr/local/include -I/usr/local/include -I/usr/include -DSHARE_DIR='"/usr/local/share/octopus"' -I. basic/accel.F90 | \
../scripts/preprocess.pl - \
"" "yes" > basic/accel_oct.f90
/usr/local/bin/bash ../libtool --tag=FC \
--mode=compile \
gfortran13 -I/usr/local/include -ffree-line-length-none -fallow-argument-mismatch -Wl,-rpath=/usr/local/lib/gcc13 -fallow-argument-mismatch -fallow-invalid-boz -fopenmp -I ../external_libs/bpdn -I ../external_libs/dftd3 -I /usr/include -I/usr/include -I/usr/include -I /usr/include -c -o basic/accel.lo basic/accel_oct.f90
libtool: compile: gfortran13 -I/usr/local/include -ffree-line-length-none -fallow-argument-mismatch -Wl,-rpath=/usr/local/lib/gcc13 -fallow-argument-mismatch -fallow-invalid-boz -fopenmp -I ../external_libs/bpdn -I ../external_libs/dftd3 -I /usr/include -I/usr/include -I/usr/include -I /usr/include -c basic/accel_oct.f90 -fPIC -o basic/.libs/accel.o
cpp -x c -ansi -isystem /usr/local/include -I../src/include -I../src/include -I../liboct_parser -I/usr/local/include -I/usr/local/include -I/usr/include -DSHARE_DIR='"/usr/local/share/octopus"' -I. basic/iihash.F90 | \
../scripts/preprocess.pl - \
"" "yes" > basic/iihash_oct.f90
/usr/local/bin/bash ../libtool --tag=FC \
--mode=compile \
gfortran13 -I/usr/local/include -ffree-line-length-none -fallow-argument-mismatch -Wl,-rpath=/usr/local/lib/gcc13 -fallow-argument-mismatch -fallow-invalid-boz -fopenmp -I ../external_libs/bpdn -I ../external_libs/dftd3 -I /usr/include -I/usr/include -I/usr/include -I /usr/include -c -o basic/iihash.lo basic/iihash_oct.f90
libtool: compile: gfortran13 -I/usr/local/include -ffree-line-length-none -fallow-argument-mismatch -Wl,-rpath=/usr/local/lib/gcc13 -fallow-argument-mismatch -fallow-invalid-boz -fopenmp -I ../external_libs/bpdn -I ../external_libs/dftd3 -I /usr/include -I/usr/include -I/usr/include -I /usr/include -c basic/iihash_oct.f90 -fPIC -o basic/.libs/iihash.o
cpp -x c -ansi -isystem /usr/local/include -I../src/include -I../src/include -I../liboct_parser -I/usr/local/include -I/usr/local/include -I/usr/include -DSHARE_DIR='"/usr/local/share/octopus"' -I. basic/io_binary_f.F90 | \
../scripts/preprocess.pl - \
"" "yes" > basic/io_binary_f_oct.f90
/usr/local/bin/bash ../libtool --tag=FC \
--mode=compile \
gfortran13 -I/usr/local/include -ffree-line-length-none -fallow-argument-mismatch -Wl,-rpath=/usr/local/lib/gcc13 -fallow-argument-mismatch -fallow-invalid-boz -fopenmp -I ../external_libs/bpdn -I ../external_libs/dftd3 -I /usr/include -I/usr/include -I/usr/include -I /usr/include -c -o basic/io_binary_f.lo basic/io_binary_f_oct.f90
libtool: compile: gfortran13 -I/usr/local/include -ffree-line-length-none -fallow-argument-mismatch -Wl,-rpath=/usr/local/lib/gcc13 -fallow-argument-mismatch -fallow-invalid-boz -fopenmp -I ../external_libs/bpdn -I ../external_libs/dftd3 -I /usr/include -I/usr/include -I/usr/include -I /usr/include -c basic/io_binary_f_oct.f90 -fPIC -o basic/.libs/io_binary_f.o
cpp -x c -ansi -isystem /usr/local/include -I../src/include -I../src/include -I../liboct_parser -I/usr/local/include -I/usr/local/include -I/usr/include -DSHARE_DIR='"/usr/local/share/octopus"' -I. grid/index.F90 | \
../scripts/preprocess.pl - \
"" "yes" > grid/index_oct.f90
/usr/local/bin/bash ../libtool --tag=FC \
--mode=compile \
gfortran13 -I/usr/local/include -ffree-line-length-none -fallow-argument-mismatch -Wl,-rpath=/usr/local/lib/gcc13 -fallow-argument-mismatch -fallow-invalid-boz -fopenmp -I ../external_libs/bpdn -I ../external_libs/dftd3 -I /usr/include -I/usr/include -I/usr/include -I /usr/include -c -o grid/index.lo grid/index_oct.f90
libtool: compile: gfortran13 -I/usr/local/include -ffree-line-length-none -fallow-argument-mismatch -Wl,-rpath=/usr/local/lib/gcc13 -fallow-argument-mismatch -fallow-invalid-boz -fopenmp -I ../external_libs/bpdn -I ../external_libs/dftd3 -I /usr/include -I/usr/include -I/usr/include -I /usr/include -c grid/index_oct.f90 -fPIC -o grid/.libs/index.o
cpp -x c -ansi -isystem /usr/local/include -I../src/include -I../src/include -I../liboct_parser -I/usr/local/include -I/usr/local/include -I/usr/include -DSHARE_DIR='"/usr/local/share/octopus"' -I. basic/io_csv_f.F90 | \
../scripts/preprocess.pl - \
"" "yes" > basic/io_csv_f_oct.f90
/usr/local/bin/bash ../libtool --tag=FC \
--mode=compile \
gfortran13 -I/usr/local/include -ffree-line-length-none -fallow-argument-mismatch -Wl,-rpath=/usr/local/lib/gcc13 -fallow-argument-mismatch -fallow-invalid-boz -fopenmp -I ../external_libs/bpdn -I ../external_libs/dftd3 -I /usr/include -I/usr/include -I/usr/include -I /usr/include -c -o basic/io_csv_f.lo basic/io_csv_f_oct.f90
libtool: compile: gfortran13 -I/usr/local/include -ffree-line-length-none -fallow-argument-mismatch -Wl,-rpath=/usr/local/lib/gcc13 -fallow-argument-mismatch -fallow-invalid-boz -fopenmp -I ../external_libs/bpdn -I ../external_libs/dftd3 -I /usr/include -I/usr/include -I/usr/include -I /usr/include -c basic/io_csv_f_oct.f90 -fPIC -o basic/.libs/io_csv_f.o
basic/io_csv_f.F90:79:46:
79 | call get_info_csv(dims, ierr, trim(fname))
| 1
Error: Type mismatch in argument 'dims' at (1); passed INTEGER(8) to INTEGER(4)
basic/io_csv_f.F90:57:50:
57 | call read_csv(np, ff(1), TYPE_DOUBLE, ierr, trim(fname))
| 1
Error: Type mismatch in argument 'np' at (1); passed INTEGER(8) to INTEGER(4)
gmake[2]: *** [Makefile:3397: basic/io_csv_f.lo] Error 1
gmake[2]: Leaving directory '/wrkdirs/usr/ports/science/octopus/work/octopus-13.0/src'
gmake[1]: *** [Makefile:548: all-recursive] Error 1
gmake[1]: Leaving directory '/wrkdirs/usr/ports/science/octopus/work/octopus-13.0'
gmake: *** [Makefile:480: all] Error 2
*** Error code 1
Stop.
make: stopped in /usr/ports/science/octopus