[package - main-i386-default][biology/minimap2] Failed for minimap2-2.28_1 in build
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Date: Mon, 15 Jul 2024 08:00:26 UTC
You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.
Maintainer: jwb@FreeBSD.org
Log URL: https://pkg-status.freebsd.org/beefy17/data/main-i386-default/p91686e4da49f_s772ae9eddf8/logs/minimap2-2.28_1.log
Build URL: https://pkg-status.freebsd.org/beefy17/build.html?mastername=main-i386-default&build=p91686e4da49f_s772ae9eddf8
Log:
=>> Building biology/minimap2
build started at Mon Jul 15 08:00:22 UTC 2024
port directory: /usr/ports/biology/minimap2
package name: minimap2-2.28_1
building for: FreeBSD main-i386-default-job-13 15.0-CURRENT FreeBSD 15.0-CURRENT 1500020 i386
maintained by: jwb@FreeBSD.org
Makefile datestamp: -rw-r--r-- 1 root wheel 613 May 30 01:01 /usr/ports/biology/minimap2/Makefile
Ports top last git commit: 91686e4da49
Ports top unclean checkout: no
Port dir last git commit: 859980f9d8c
Port dir unclean checkout: no
Poudriere version: poudriere-git-3.4.1-30-g79e3edcd
Host OSVERSION: 1500019
Jail OSVERSION: 1500020
Job Id: 13
!!! Jail is newer than host. (Jail: 1500020, Host: 1500019) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!
---Begin Environment---
SHELL=/bin/sh
BLOCKSIZE=K
MAIL=/var/mail/root
MM_CHARSET=UTF-8
LANG=C.UTF-8
OSVERSION=1500020
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
MAKE_OBJDIR_CHECK_WRITABLE=0
UNAME_m=i386
UNAME_p=i386
UNAME_r=15.0-CURRENT
LOCALBASE=/usr/local
UNAME_v=FreeBSD 15.0-CURRENT 1500020
USER=root
POUDRIERE_NAME=poudriere-git
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.4.1-30-g79e3edcd
MASTERMNT=/usr/local/poudriere/data/.m/main-i386-default/ref
LC_COLLATE=C
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
OUTPUT_REDIRECTED_STDERR=4
OUTPUT_REDIRECTED=1
PWD=/usr/local/poudriere/data/.m/main-i386-default/13/.p
OUTPUT_REDIRECTED_STDOUT=3
P_PORTS_FEATURES=FLAVORS SUBPACKAGES SELECTED_OPTIONS
MASTERNAME=main-i386-default
SCRIPTPREFIX=/usr/local/share/poudriere
SCRIPTNAME=bulk.sh
OLDPWD=/usr/local/poudriere/data/.m/main-i386-default/ref/.p/pool
POUDRIERE_PKGNAME=poudriere-git-3.4.1-30-g79e3edcd
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---
---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=
MAKE_ARGS=
---End Poudriere Port Flags/Env---
---Begin OPTIONS List---
---End OPTIONS List---
--MAINTAINER--
jwb@FreeBSD.org
--End MAINTAINER--
--CONFIGURE_ARGS--
--End CONFIGURE_ARGS--
--CONFIGURE_ENV--
MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/minimap2/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/minimap2/work XDG_CACHE_HOME=/wrkdirs/usr/ports/biology/minimap2/work/.cache HOME=/wrkdirs/usr/ports/biology/minimap2/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/biology/minimap2/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/biology/minimap2/work/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig SHELL=/bin/sh CONFIG_SHELL=/bin/sh CMAKE_PREFIX_PATH="/usr/local"
--End CONFIGURE_ENV--
--MAKE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/minimap2/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/minimap2/work XDG_CACHE_HOME=/wrkdirs/usr/ports/biology/minimap2/work/.cache HOME=/wrkdirs/usr/ports/biology/minimap2/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/biology/minimap2/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/biology/minimap2/work/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES PREFIX=/usr/local LOCALBASE=/usr/local CC="cc" CFLAGS="-O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing " CPP="cpp" CPPFLAGS="-isystem /usr/local/include" LDFLAGS=" -fstack-protector-strong " LIBS="-L/usr/local/lib" CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -isystem /usr/local/include " BSD_INSTALL_PROGRAM="in
stall -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444"
--End MAKE_ENV--
--PLIST_SUB--
OSREL=15.0 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/minimap2" EXAMPLESDIR="share/examples/minimap2" DATADIR="share/minimap2" WWWDIR="www/minimap2" ETCDIR="etc/minimap2"
--End PLIST_SUB--
--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/minimap2 DOCSDIR=/usr/local/share/doc/minimap2 EXAMPLESDIR=/usr/local/share/examples/minimap2 WWWDIR=/usr/local/www/minimap2 ETCDIR=/usr/local/etc/minimap2
--End SUB_LIST--
---Begin make.conf---
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure. It currently retries the same
# failed mirror and then fails rather then trying another. It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 3 jobs
MAKE_JOBS_NUMBER=3
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
MACHINE=i386
MACHINE_ARCH=i386
ARCH=${MACHINE_ARCH}
#### ####
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure. It currently retries the same
# failed mirror and then fails rather then trying another. It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 3 jobs
MAKE_JOBS_NUMBER=3
#### Misc Poudriere ####
.include "/etc/make.conf.ports_env"
GID=0
UID=0
---End make.conf---
--Resource limits--
cpu time (seconds, -t) unlimited
file size (512-blocks, -f) unlimited
data seg size (kbytes, -d) 524288
stack size (kbytes, -s) 65536
core file size (512-blocks, -c) unlimited
max memory size (kbytes, -m) unlimited
locked memory (kbytes, -l) unlimited
max user processes (-u) 89999
open files (-n) 8192
virtual mem size (kbytes, -v) unlimited
swap limit (kbytes, -w) unlimited
socket buffer size (bytes, -b) unlimited
pseudo-terminals (-p) unlimited
kqueues (-k) unlimited
umtx shared locks (-o) unlimited
--End resource limits--
=======================<phase: check-sanity >============================
===== env: NO_DEPENDS=yes USER=root UID=0 GID=0
===> License MIT accepted by the user
===========================================================================
=======================<phase: pkg-depends >============================
===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0
===> minimap2-2.28_1 depends on file: /usr/local/sbin/pkg - not found
===> Installing existing package /packages/All/pkg-1.21.3.pkg
[main-i386-default-job-13] Installing pkg-1.21.3...
[main-i386-default-job-13] Extracting pkg-1.21.3: .......... done
===> minimap2-2.28_1 depends on file: /usr/local/sbin/pkg - found
===> Returning to build of minimap2-2.28_1
===========================================================================
=======================<phase: fetch-depends >============================
===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0
===========================================================================
=======================<phase: fetch >============================
===== env: NO_DEPENDS=yes USER=root UID=0 GID=0
===> License MIT accepted by the user
===> Fetching all distfiles required by minimap2-2.28_1 for building
===========================================================================
=======================<phase: checksum >============================
===== env: NO_DEPENDS=yes USER=root UID=0 GID=0
===> License MIT accepted by the user
===> Fetching all distfiles required by minimap2-2.28_1 for building
=> SHA256 Checksum OK for lh3-minimap2-v2.28_GH0.tar.gz.
===========================================================================
=======================<phase: extract-depends>============================
===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0
===========================================================================
=======================<phase: extract >============================
===== env: NO_DEPENDS=yes USER=root UID=0 GID=0
===> License MIT accepted by the user
===> Fetching all distfiles required by minimap2-2.28_1 for building
===> Extracting for minimap2-2.28_1
=> SHA256 Checksum OK for lh3-minimap2-v2.28_GH0.tar.gz.
===========================================================================
=======================<phase: patch-depends >============================
===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0
===========================================================================
=======================<phase: patch >============================
===== env: NO_DEPENDS=yes USER=root UID=0 GID=0
===> Patching for minimap2-2.28_1
===> Applying FreeBSD patches for minimap2-2.28_1 from /usr/ports/biology/minimap2/files
===========================================================================
=======================<phase: build-depends >============================
===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0
===> minimap2-2.28_1 depends on package: simde>0 - not found
===> Installing existing package /packages/All/simde-0.8.2.pkg
[main-i386-default-job-13] Installing simde-0.8.2...
[main-i386-default-job-13] Extracting simde-0.8.2: .......... done
<snip>
===> minimap2-2.28_1 depends on package: gmake>=4.4.1 - not found
===> Installing existing package /packages/All/gmake-4.4.1.pkg
[main-i386-default-job-13] Installing gmake-4.4.1...
[main-i386-default-job-13] `-- Installing gettext-runtime-0.22.5...
[main-i386-default-job-13] | `-- Installing indexinfo-0.3.1...
[main-i386-default-job-13] | `-- Extracting indexinfo-0.3.1: .... done
[main-i386-default-job-13] `-- Extracting gettext-runtime-0.22.5: .......... done
[main-i386-default-job-13] Extracting gmake-4.4.1: .......... done
===> minimap2-2.28_1 depends on package: gmake>=4.4.1 - found
===> Returning to build of minimap2-2.28_1
===========================================================================
=======================<phase: lib-depends >============================
===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0
===========================================================================
=======================<phase: configure >============================
===== env: NO_DEPENDS=yes USER=root UID=0 GID=0
===> Configuring for minimap2-2.28_1
===========================================================================
=======================<phase: build >============================
===== env: NO_DEPENDS=yes USER=root UID=0 GID=0
===> Building for minimap2-2.28_1
/usr/bin/sed -i.bak -e 's|-msse4.1||g' -e 's|-msse2||g' /wrkdirs/usr/ports/biology/minimap2/work/minimap2-2.28/Makefile.simde
cc -c -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -Wc++-compat -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -D__SSE2__ -isystem /usr/local/include main.c -o main.o
cc -c -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -Wc++-compat -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -D__SSE2__ -isystem /usr/local/include kthread.c -o kthread.o
cc -c -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -Wc++-compat -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -D__SSE2__ -isystem /usr/local/include kalloc.c -o kalloc.o
kalloc.c:223:4: warning: format specifies type 'long' but the argument has type 'size_t' (aka 'unsigned int') [-Wformat]
222 | fprintf(stderr, "[km_stat] cap=%ld, avail=%ld, largest=%ld, n_core=%ld, n_block=%ld\n",
| ~~~
| %zu
223 | st.capacity, st.available, st.largest, st.n_blocks, st.n_cores);
| ^~~~~~~~~~~
kalloc.c:223:17: warning: format specifies type 'long' but the argument has type 'size_t' (aka 'unsigned int') [-Wformat]
222 | fprintf(stderr, "[km_stat] cap=%ld, avail=%ld, largest=%ld, n_core=%ld, n_block=%ld\n",
| ~~~
| %zu
223 | st.capacity, st.available, st.largest, st.n_blocks, st.n_cores);
| ^~~~~~~~~~~~
kalloc.c:223:31: warning: format specifies type 'long' but the argument has type 'size_t' (aka 'unsigned int') [-Wformat]
222 | fprintf(stderr, "[km_stat] cap=%ld, avail=%ld, largest=%ld, n_core=%ld, n_block=%ld\n",
| ~~~
| %zu
223 | st.capacity, st.available, st.largest, st.n_blocks, st.n_cores);
| ^~~~~~~~~~
kalloc.c:223:43: warning: format specifies type 'long' but the argument has type 'size_t' (aka 'unsigned int') [-Wformat]
222 | fprintf(stderr, "[km_stat] cap=%ld, avail=%ld, largest=%ld, n_core=%ld, n_block=%ld\n",
| ~~~
| %zu
223 | st.capacity, st.available, st.largest, st.n_blocks, st.n_cores);
| ^~~~~~~~~~~
kalloc.c:223:56: warning: format specifies type 'long' but the argument has type 'size_t' (aka 'unsigned int') [-Wformat]
222 | fprintf(stderr, "[km_stat] cap=%ld, avail=%ld, largest=%ld, n_core=%ld, n_block=%ld\n",
| ~~~
| %zu
223 | st.capacity, st.available, st.largest, st.n_blocks, st.n_cores);
| ^~~~~~~~~~
cc -c -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -Wc++-compat -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -D__SSE2__ -isystem /usr/local/include misc.c -o misc.o
5 warnings generated.
cc -c -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -Wc++-compat -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -D__SSE2__ -isystem /usr/local/include bseq.c -o bseq.o
cc -c -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -Wc++-compat -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -D__SSE2__ -isystem /usr/local/include sketch.c -o sketch.o
cc -c -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -Wc++-compat -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -D__SSE2__ -isystem /usr/local/include sdust.c -o sdust.o
cc -c -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -Wc++-compat -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -D__SSE2__ -isystem /usr/local/include options.c -o options.o
cc -c -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -Wc++-compat -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -D__SSE2__ -isystem /usr/local/include index.c -o index.o
cc -c -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -Wc++-compat -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -D__SSE2__ -isystem /usr/local/include lchain.c -o lchain.o
cc -c -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -Wc++-compat -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -D__SSE2__ -isystem /usr/local/include align.c -o align.o
cc -c -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -Wc++-compat -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -D__SSE2__ -isystem /usr/local/include hit.c -o hit.o
cc -c -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -Wc++-compat -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -D__SSE2__ -isystem /usr/local/include map.c -o map.o
map.c:365:84: warning: format specifies type 'long' but the argument has type 'size_t' (aka 'unsigned int') [-Wformat]
365 | fprintf(stderr, "QM\t%s\t%d\tcap=%ld,nCore=%ld,largest=%ld\n", qname, qlen_sum, kmst.capacity, kmst.n_cores, kmst.largest);
| ~~~ ^~~~~~~~~~~~~
| %zu
map.c:365:99: warning: format specifies type 'long' but the argument has type 'size_t' (aka 'unsigned int') [-Wformat]
365 | fprintf(stderr, "QM\t%s\t%d\tcap=%ld,nCore=%ld,largest=%ld\n", qname, qlen_sum, kmst.capacity, kmst.n_cores, kmst.largest);
| ~~~ ^~~~~~~~~~~~
| %zu
map.c:365:113: warning: format specifies type 'long' but the argument has type 'size_t' (aka 'unsigned int') [-Wformat]
365 | fprintf(stderr, "QM\t%s\t%d\tcap=%ld,nCore=%ld,largest=%ld\n", qname, qlen_sum, kmst.capacity, kmst.n_cores, kmst.largest);
| ~~~ ^~~~~~~~~~~~
| %zu
cc -c -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -Wc++-compat -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -D__SSE2__ -isystem /usr/local/include format.c -o format.o
cc -c -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -Wc++-compat -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -D__SSE2__ -isystem /usr/local/include pe.c -o pe.o
3 warnings generated.
cc -c -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -Wc++-compat -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -D__SSE2__ -isystem /usr/local/include seed.c -o seed.o
cc -c -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -Wc++-compat -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -D__SSE2__ -isystem /usr/local/include esterr.c -o esterr.o
cc -c -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -Wc++-compat -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -D__SSE2__ -isystem /usr/local/include splitidx.c -o splitidx.o
cc -c -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -Wc++-compat -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -D__SSE2__ -isystem /usr/local/include ksw2_extz2_sse.c -o ksw2_extz2_simde.o
cc -c -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -Wc++-compat -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -D__SSE2__ -isystem /usr/local/include ksw2_extd2_sse.c -o ksw2_extd2_simde.o
In file included from ksw2_extz2_sse.c:7:
In file included from /usr/local/include/simde/x86/sse2.h:35:
In file included from /usr/local/include/simde/x86/sse.h:33:
In file included from /usr/local/include/simde/x86/mmx.h:30:
In file included from /usr/local/include/simde/x86/../simde-common.h:45:
In file included from /usr/local/include/simde/x86/../simde-features.h:319:
/usr/lib/clang/18/include/emmintrin.h:43:9: error: _Float16 is not supported on this target
43 | typedef _Float16 __v8hf __attribute__((__vector_size__(16), __aligned__(16)));
| ^
/usr/lib/clang/18/include/emmintrin.h:44:9: error: _Float16 is not supported on this target
44 | typedef _Float16 __m128h __attribute__((__vector_size__(16), __aligned__(16)));
| ^
/usr/lib/clang/18/include/emmintrin.h:45:9: error: _Float16 is not supported on this target
45 | typedef _Float16 __m128h_u __attribute__((__vector_size__(16), __aligned__(1)));
| ^
/usr/lib/clang/18/include/emmintrin.h:47:9: error: __bf16 is not supported on this target
47 | typedef __bf16 __v8bf __attribute__((__vector_size__(16), __aligned__(16)));
| ^
/usr/lib/clang/18/include/emmintrin.h:47:38: error: vector size not an integral multiple of component size
47 | typedef __bf16 __v8bf __attribute__((__vector_size__(16), __aligned__(16)));
| ^ ~~
/usr/lib/clang/18/include/emmintrin.h:48:9: error: __bf16 is not supported on this target
48 | typedef __bf16 __m128bh __attribute__((__vector_size__(16), __aligned__(16)));
| ^
/usr/lib/clang/18/include/emmintrin.h:48:40: error: vector size not an integral multiple of component size
48 | typedef __bf16 __m128bh __attribute__((__vector_size__(16), __aligned__(16)));
| ^ ~~
In file included from ksw2_extd2_sse.c:8:
In file included from /usr/local/include/simde/x86/sse2.h:35:
In file included from /usr/local/include/simde/x86/sse.h:33:
In file included from /usr/local/include/simde/x86/mmx.h:30:
In file included from /usr/local/include/simde/x86/../simde-common.h:45:
In file included from /usr/local/include/simde/x86/../simde-features.h:319:
/usr/lib/clang/18/include/emmintrin.h:43:9: error: _Float16 is not supported on this target
43 | typedef _Float16 __v8hf __attribute__((__vector_size__(16), __aligned__(16)));
| ^
/usr/lib/clang/18/include/emmintrin.h:44:9: error: _Float16 is not supported on this target
44 | typedef _Float16 __m128h __attribute__((__vector_size__(16), __aligned__(16)));
| ^
/usr/lib/clang/18/include/emmintrin.h:45:9: error: _Float16 is not supported on this target
45 | typedef _Float16 __m128h_u __attribute__((__vector_size__(16), __aligned__(1)));
| ^
/usr/lib/clang/18/include/emmintrin.h:47:9: error: __bf16 is not supported on this target
47 | typedef __bf16 __v8bf __attribute__((__vector_size__(16), __aligned__(16)));
| ^
/usr/lib/clang/18/include/emmintrin.h:47:38: error: vector size not an integral multiple of component size
47 | typedef __bf16 __v8bf __attribute__((__vector_size__(16), __aligned__(16)));
| ^ ~~
/usr/lib/clang/18/include/emmintrin.h:48:9: error: __bf16 is not supported on this target
48 | typedef __bf16 __m128bh __attribute__((__vector_size__(16), __aligned__(16)));
| ^
/usr/lib/clang/18/include/emmintrin.h:48:40: error: vector size not an integral multiple of component size
48 | typedef __bf16 __m128bh __attribute__((__vector_size__(16), __aligned__(16)));
| ^ ~~
In file included from ksw2_extz2_sse.c:7:
In file included from /usr/local/include/simde/x86/sse2.h:35:
In file included from /usr/local/include/simde/x86/sse.h:34:
/usr/local/include/simde/x86/../simde-f16.h:98:11: error: _Float16 is not supported on this target
98 | typedef _Float16 simde_float16;
| ^
cc -c -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -Wc++-compat -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -D__SSE2__ -isystem /usr/local/include ksw2_exts2_sse.c -o ksw2_exts2_simde.o
8 errors generated.
In file included from ksw2_extd2_sse.c:8:
In file included from /usr/local/include/simde/x86/sse2.h:35:
In file included from /usr/local/include/simde/x86/sse.h:34:
/usr/local/include/simde/x86/../simde-f16.h:98:11: error: _Float16 is not supported on this target
98 | typedef _Float16 simde_float16;
| ^
gmake: *** [Makefile.simde:68: ksw2_extz2_simde.o] Error 1
gmake: *** Waiting for unfinished jobs....
In file included from ksw2_exts2_sse.c:8:
In file included from /usr/local/include/simde/x86/sse2.h:35:
In file included from /usr/local/include/simde/x86/sse.h:33:
In file included from /usr/local/include/simde/x86/mmx.h:30:
In file included from /usr/local/include/simde/x86/../simde-common.h:45:
In file included from /usr/local/include/simde/x86/../simde-features.h:319:
/usr/lib/clang/18/include/emmintrin.h:43:9: error: _Float16 is not supported on this target
43 | typedef _Float16 __v8hf __attribute__((__vector_size__(16), __aligned__(16)));
| ^
/usr/lib/clang/18/include/emmintrin.h:44:9: error: _Float16 is not supported on this target
44 | typedef _Float16 __m128h __attribute__((__vector_size__(16), __aligned__(16)));
| ^
/usr/lib/clang/18/include/emmintrin.h:45:9: error: _Float16 is not supported on this target
45 | typedef _Float16 __m128h_u __attribute__((__vector_size__(16), __aligned__(1)));
| ^
/usr/lib/clang/18/include/emmintrin.h:47:9: error: __bf16 is not supported on this target
47 | typedef __bf16 __v8bf __attribute__((__vector_size__(16), __aligned__(16)));
| ^
/usr/lib/clang/18/include/emmintrin.h:47:38: error: vector size not an integral multiple of component size
47 | typedef __bf16 __v8bf __attribute__((__vector_size__(16), __aligned__(16)));
| ^ ~~
/usr/lib/clang/18/include/emmintrin.h:48:9: error: __bf16 is not supported on this target
48 | typedef __bf16 __m128bh __attribute__((__vector_size__(16), __aligned__(16)));
| ^
/usr/lib/clang/18/include/emmintrin.h:48:40: error: vector size not an integral multiple of component size
48 | typedef __bf16 __m128bh __attribute__((__vector_size__(16), __aligned__(16)));
| ^ ~~
8 errors generated.
gmake: *** [Makefile.simde:71: ksw2_extd2_simde.o] Error 1
In file included from ksw2_exts2_sse.c:8:
In file included from /usr/local/include/simde/x86/sse2.h:35:
In file included from /usr/local/include/simde/x86/sse.h:34:
/usr/local/include/simde/x86/../simde-f16.h:98:11: error: _Float16 is not supported on this target
98 | typedef _Float16 simde_float16;
| ^
8 errors generated.
gmake: *** [Makefile.simde:74: ksw2_exts2_simde.o] Error 1
===> Compilation failed unexpectedly.
Try to set MAKE_JOBS_UNSAFE=yes and rebuild before reporting the failure to
the maintainer.
*** Error code 1
Stop.
make: stopped in /usr/ports/biology/minimap2