[package - main-amd64-default][misc/lbann] Failed for lbann-0.102.254_4 in build

From: <pkg-fallout_at_FreeBSD.org>
Date: Wed, 10 Jan 2024 19:44:13 UTC
You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer:     yuri@FreeBSD.org
Log URL:        https://pkg-status.freebsd.org/beefy18/data/main-amd64-default/pbc67f159e5b6_sdf8a58b17a/logs/lbann-0.102.254_4.log
Build URL:      https://pkg-status.freebsd.org/beefy18/build.html?mastername=main-amd64-default&build=pbc67f159e5b6_sdf8a58b17a
Log:

=>> Building misc/lbann
build started at Wed Jan 10 19:07:49 UTC 2024
port directory: /usr/ports/misc/lbann
package name: lbann-0.102.254_4
building for: FreeBSD main-amd64-default-job-03 15.0-CURRENT FreeBSD 15.0-CURRENT 1500008 amd64
maintained by: yuri@FreeBSD.org
Makefile datestamp: -rw-r--r--  1 root wheel 1690 Dec 19 01:01 /usr/ports/misc/lbann/Makefile
Ports top last git commit: bc67f159e5b
Ports top unclean checkout: no
Port dir last git commit: 69e2e87fa56
Port dir unclean checkout: no
Poudriere version: poudriere-git-3.4.0
Host OSVERSION: 1500006
Jail OSVERSION: 1500008
Job Id: 03




!!! Jail is newer than host. (Jail: 1500008, Host: 1500006) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



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=======================<phase: check-sanity   >============================
===== env: NO_DEPENDS=yes USER=root UID=0 GID=0
===>  License APACHE20 accepted by the user
===========================================================================
=======================<phase: pkg-depends    >============================
===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0
===>   lbann-0.102.254_4 depends on file: /usr/local/sbin/pkg - not found
===>   Installing existing package /packages/All/pkg-1.20.9.pkg
[main-amd64-default-job-03] Installing pkg-1.20.9...
[main-amd64-default-job-03] Extracting pkg-1.20.9: .......... done
===>   lbann-0.102.254_4 depends on file: /usr/local/sbin/pkg - found
===>   Returning to build of lbann-0.102.254_4
===========================================================================
=======================<phase: fetch-depends  >============================
===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0
===========================================================================
=======================<phase: fetch          >============================
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===> Fetching all distfiles required by lbann-0.102.254_4 for building
===========================================================================
=======================<phase: checksum       >============================
===== env: NO_DEPENDS=yes USER=root UID=0 GID=0
===>  License APACHE20 accepted by the user
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=> SHA256 Checksum OK for LLNL-lbann-v0.102-254-g2e3012a9a_GH0.tar.gz.
=> SHA256 Checksum OK for KIwabuchi-havoqgt-100f63b_GH0.tar.gz.
=> SHA256 Checksum OK for samadejacobs-moses-28932ce_GH0.tar.gz.
=> SHA256 Checksum OK for snap-stanford-snap-58a1e6a_GH0.tar.gz.
=> SHA256 Checksum OK for catchorg-Clara-2bfd8b2_GH0.tar.gz.
===========================================================================
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===========================================================================
=======================<phase: extract        >============================
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===>  License APACHE20 accepted by the user
===> Fetching all distfiles required by lbann-0.102.254_4 for building
===>  Extracting for lbann-0.102.254_4
=> SHA256 Checksum OK for LLNL-lbann-v0.102-254-g2e3012a9a_GH0.tar.gz.
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=> SHA256 Checksum OK for samadejacobs-moses-28932ce_GH0.tar.gz.
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=> SHA256 Checksum OK for catchorg-Clara-2bfd8b2_GH0.tar.gz.
===========================================================================
=======================<phase: patch-depends  >============================
===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0
===========================================================================
=======================<phase: patch          >============================
===== env: NO_DEPENDS=yes USER=root UID=0 GID=0
===>  Patching for lbann-0.102.254_4
===>  Applying FreeBSD patches for lbann-0.102.254_4 from /usr/ports/misc/lbann/files
===========================================================================
=======================<phase: build-depends  >============================
===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0
===>   lbann-0.102.254_4 depends on package: cereal>0 - not found
===>   Installing existing package /packages/All/cereal-1.3.2_1.pkg
[main-amd64-default-job-03] Installing cereal-1.3.2_1...
<snip>
[ 34% 163/466] /usr/bin/c++ -DH5_BUILT_AS_DYNAMIC_LIB -Dlbann_EXPORTS -I/wrkdirs/usr/ports/misc/lbann/work/.build -I/wrkdirs/usr/ports/misc/lbann/work/lbann-0.102-254-g2e3012a9a/include -isystem /wrkdirs/usr/ports/misc/lbann/work/.build/src/proto -isystem /usr/local/include/El -isystem /usr/local/include/conduit -isystem /wrkdirs/usr/ports/misc/lbann/work/Clara-2bfd8b2/include -O2 -pipe  -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing   -isystem /usr/local/include -std=c++17  -Wall -Wextra -Wno-unused-parameter -Wnon-virtual-dtor -Wshadow -Wno-deprecated-declarations -O2 -pipe  -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing   -isystem /usr/local/include -std=c++17  -DNDEBUG -fPIC -pthread -fopenmp=libomp -DCONDUIT_RELAY_IO_MPI_ENABLED -DCONDUIT_BLUEPRINT_MPI_ENABLED -MD -MT CMakeFiles/lbann.dir/src/layers/regularizers/cereal_registration/instance_norm.cpp.o -MF CMakeFiles/lbann.dir/src/layers/regularizers/cereal_registrati
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[ 34% 164/466] /usr/bin/c++ -DH5_BUILT_AS_DYNAMIC_LIB -Dlbann_EXPORTS -I/wrkdirs/usr/ports/misc/lbann/work/.build -I/wrkdirs/usr/ports/misc/lbann/work/lbann-0.102-254-g2e3012a9a/include -isystem /wrkdirs/usr/ports/misc/lbann/work/.build/src/proto -isystem /usr/local/include/El -isystem /usr/local/include/conduit -isystem /wrkdirs/usr/ports/misc/lbann/work/Clara-2bfd8b2/include -O2 -pipe  -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing   -isystem /usr/local/include -std=c++17  -Wall -Wextra -Wno-unused-parameter -Wnon-virtual-dtor -Wshadow -Wno-deprecated-declarations -O2 -pipe  -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing   -isystem /usr/local/include -std=c++17  -DNDEBUG -fPIC -pthread -fopenmp=libomp -DCONDUIT_RELAY_IO_MPI_ENABLED -DCONDUIT_BLUEPRINT_MPI_ENABLED -MD -MT CMakeFiles/lbann.dir/src/layers/regularizers/cereal_registration/layer_norm.cpp.o -MF CMakeFiles/lbann.dir/src/layers/regularizers/cereal_registration/
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[ 34% 165/466] /usr/bin/c++ -DH5_BUILT_AS_DYNAMIC_LIB -Dlbann_EXPORTS -I/wrkdirs/usr/ports/misc/lbann/work/.build -I/wrkdirs/usr/ports/misc/lbann/work/lbann-0.102-254-g2e3012a9a/include -isystem /wrkdirs/usr/ports/misc/lbann/work/.build/src/proto -isystem /usr/local/include/El -isystem /usr/local/include/conduit -isystem /wrkdirs/usr/ports/misc/lbann/work/Clara-2bfd8b2/include -O2 -pipe  -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing   -isystem /usr/local/include -std=c++17  -Wall -Wextra -Wno-unused-parameter -Wnon-virtual-dtor -Wshadow -Wno-deprecated-declarations -O2 -pipe  -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing   -isystem /usr/local/include -std=c++17  -DNDEBUG -fPIC -pthread -fopenmp=libomp -DCONDUIT_RELAY_IO_MPI_ENABLED -DCONDUIT_BLUEPRINT_MPI_ENABLED -MD -MT CMakeFiles/lbann.dir/src/layers/regularizers/batch_normalization.cpp.o -MF CMakeFiles/lbann.dir/src/layers/regularizers/batch_normalization.cpp.o.d -o 
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[ 35% 166/466] /usr/bin/c++ -DH5_BUILT_AS_DYNAMIC_LIB -Dlbann_EXPORTS -I/wrkdirs/usr/ports/misc/lbann/work/.build -I/wrkdirs/usr/ports/misc/lbann/work/lbann-0.102-254-g2e3012a9a/include -isystem /wrkdirs/usr/ports/misc/lbann/work/.build/src/proto -isystem /usr/local/include/El -isystem /usr/local/include/conduit -isystem /wrkdirs/usr/ports/misc/lbann/work/Clara-2bfd8b2/include -O2 -pipe  -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing   -isystem /usr/local/include -std=c++17  -Wall -Wextra -Wno-unused-parameter -Wnon-virtual-dtor -Wshadow -Wno-deprecated-declarations -O2 -pipe  -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing   -isystem /usr/local/include -std=c++17  -DNDEBUG -fPIC -pthread -fopenmp=libomp -DCONDUIT_RELAY_IO_MPI_ENABLED -DCONDUIT_BLUEPRINT_MPI_ENABLED -MD -MT CMakeFiles/lbann.dir/src/layers/regularizers/cereal_registration/local_response_normalization.cpp.o -MF CMakeFiles/lbann.dir/src/layers/regularizers/ce
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[ 35% 167/466] /usr/bin/c++ -DH5_BUILT_AS_DYNAMIC_LIB -Dlbann_EXPORTS -I/wrkdirs/usr/ports/misc/lbann/work/.build -I/wrkdirs/usr/ports/misc/lbann/work/lbann-0.102-254-g2e3012a9a/include -isystem /wrkdirs/usr/ports/misc/lbann/work/.build/src/proto -isystem /usr/local/include/El -isystem /usr/local/include/conduit -isystem /wrkdirs/usr/ports/misc/lbann/work/Clara-2bfd8b2/include -O2 -pipe  -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing   -isystem /usr/local/include -std=c++17  -Wall -Wextra -Wno-unused-parameter -Wnon-virtual-dtor -Wshadow -Wno-deprecated-declarations -O2 -pipe  -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing   -isystem /usr/local/include -std=c++17  -DNDEBUG -fPIC -pthread -fopenmp=libomp -DCONDUIT_RELAY_IO_MPI_ENABLED -DCONDUIT_BLUEPRINT_MPI_ENABLED -MD -MT CMakeFiles/lbann.dir/src/layers/regularizers/cereal_registration/selu_dropout.cpp.o -MF CMakeFiles/lbann.dir/src/layers/regularizers/cereal_registratio
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[ 35% 168/466] /usr/bin/c++ -DH5_BUILT_AS_DYNAMIC_LIB -Dlbann_EXPORTS -I/wrkdirs/usr/ports/misc/lbann/work/.build -I/wrkdirs/usr/ports/misc/lbann/work/lbann-0.102-254-g2e3012a9a/include -isystem /wrkdirs/usr/ports/misc/lbann/work/.build/src/proto -isystem /usr/local/include/El -isystem /usr/local/include/conduit -isystem /wrkdirs/usr/ports/misc/lbann/work/Clara-2bfd8b2/include -O2 -pipe  -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing   -isystem /usr/local/include -std=c++17  -Wall -Wextra -Wno-unused-parameter -Wnon-virtual-dtor -Wshadow -Wno-deprecated-declarations -O2 -pipe  -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing   -isystem /usr/local/include -std=c++17  -DNDEBUG -fPIC -pthread -fopenmp=libomp -DCONDUIT_RELAY_IO_MPI_ENABLED -DCONDUIT_BLUEPRINT_MPI_ENABLED -MD -MT CMakeFiles/lbann.dir/src/layers/regularizers/dropout.cpp.o -MF CMakeFiles/lbann.dir/src/layers/regularizers/dropout.cpp.o.d -o CMakeFiles/lbann.dir/src
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de.cpp.o.d -o CMakeFiles/lbann.dir/src/operators/math/cereal_registration/safe_divide.cpp.o -c /wrkdirs/usr/ports/misc/lbann/work/lbann-0.102-254-g2e3012a9a/src/operators/math/cereal_registration/safe_divide.cpp
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CMakeFiles/lbann.dir/src/operators/math/cereal_registration/sinh.cpp.o -c /wrkdirs/usr/ports/misc/lbann/work/lbann-0.102-254-g2e3012a9a/src/operators/math/cereal_registration/sinh.cpp
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CMakeFiles/lbann.dir/src/operators/math/cereal_registration/sqrt.cpp.o -c /wrkdirs/usr/ports/misc/lbann/work/lbann-0.102-254-g2e3012a9a/src/operators/math/cereal_registration/sqrt.cpp
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 -o CMakeFiles/lbann.dir/src/operators/math/cereal_registration/square.cpp.o -c /wrkdirs/usr/ports/misc/lbann/work/lbann-0.102-254-g2e3012a9a/src/operators/math/cereal_registration/square.cpp
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uared_difference.cpp.o.d -o CMakeFiles/lbann.dir/src/operators/math/cereal_registration/squared_difference.cpp.o -c /wrkdirs/usr/ports/misc/lbann/work/lbann-0.102-254-g2e3012a9a/src/operators/math/cereal_registration/squared_difference.cpp
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ath/binary.cpp.o -c /wrkdirs/usr/ports/misc/lbann/work/lbann-0.102-254-g2e3012a9a/src/operators/math/binary.cpp
FAILED: CMakeFiles/lbann.dir/src/operators/math/binary.cpp.o 
/usr/bin/c++ -DH5_BUILT_AS_DYNAMIC_LIB -Dlbann_EXPORTS -I/wrkdirs/usr/ports/misc/lbann/work/.build -I/wrkdirs/usr/ports/misc/lbann/work/lbann-0.102-254-g2e3012a9a/include -isystem /wrkdirs/usr/ports/misc/lbann/work/.build/src/proto -isystem /usr/local/include/El -isystem /usr/local/include/conduit -isystem /wrkdirs/usr/ports/misc/lbann/work/Clara-2bfd8b2/include -O2 -pipe  -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing   -isystem /usr/local/include -std=c++17  -Wall -Wextra -Wno-unused-parameter -Wnon-virtual-dtor -Wshadow -Wno-deprecated-declarations -O2 -pipe  -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing   -isystem /usr/local/include -std=c++17  -DNDEBUG -fPIC -pthread -fopenmp=libomp -DCONDUIT_RELAY_IO_MPI_ENABLED -DCONDUIT_BLUEPRINT_MPI_ENABLED -MD -MT CMakeFiles/lbann.dir/src/operators/math/binary.cpp.o -MF CMakeFiles/lbann.dir/src/operators/math/binary.cpp.o.d -o CMakeFiles/lbann.dir/src/operators/math/binary.cpp.
o -c /wrkdirs/usr/ports/misc/lbann/work/lbann-0.102-254-g2e3012a9a/src/operators/math/binary.cpp
In file included from /wrkdirs/usr/ports/misc/lbann/work/lbann-0.102-254-g2e3012a9a/src/operators/math/binary.cpp:27:
In file included from /wrkdirs/usr/ports/misc/lbann/work/lbann-0.102-254-g2e3012a9a/include/lbann/operators/math/binary.hpp:30:
In file included from /wrkdirs/usr/ports/misc/lbann/work/lbann-0.102-254-g2e3012a9a/include/lbann/operators/declare_stateless_op.hpp:29:
In file included from /wrkdirs/usr/ports/misc/lbann/work/lbann-0.102-254-g2e3012a9a/include/lbann/operators/elementwise_operator.hpp:30:
In file included from /wrkdirs/usr/ports/misc/lbann/work/lbann-0.102-254-g2e3012a9a/include/lbann/operators/operator.hpp:30:
In file included from /wrkdirs/usr/ports/misc/lbann/work/lbann-0.102-254-g2e3012a9a/include/lbann/base.hpp:30:
In file included from /usr/local/include/El.hpp:14:
In file included from /usr/local/include/El/core.hpp:16:
In file included from /usr/include/c++/v1/array:150:
In file included from /usr/include/c++/v1/compare:145:
In file included from /usr/include/c++/v1/__compare/compare_partial_order_fallback.h:13:
In file included from /usr/include/c++/v1/__compare/partial_order.h:14:
In file included from /usr/include/c++/v1/__compare/weak_order.h:14:
In file included from /usr/include/c++/v1/__compare/strong_order.h:20:
In file included from /usr/include/c++/v1/cmath:318:
/usr/include/c++/v1/math.h:446:26: error: floating point classification requires argument of floating point type (passed in 'half_float::half')
  446 |   return __builtin_isnan(__x);
      |                          ^~~
/wrkdirs/usr/ports/misc/lbann/work/lbann-0.102-254-g2e3012a9a/src/operators/math/binary.cpp:398:66: note: in instantiation of function template specialization 'isnan<half_float::half, 0>' requested here
  398 |     bool const b1 = x1 != El::TypeTraits<DataT>::Zero() && !std::isnan(x1);
      |                                                                  ^
/wrkdirs/usr/ports/misc/lbann/work/lbann-0.102-254-g2e3012a9a/src/operators/math/common.hpp:65:17: note: in instantiation of member function 'lbann::(anonymous namespace)::LogicalAndOpImpl<half_float::half>::operator()' requested here
   65 |       CBuf[i] = func(ABuf[i], BBuf[i]);
      |                 ^
/wrkdirs/usr/ports/misc/lbann/work/lbann-0.102-254-g2e3012a9a/src/operators/math/binary.cpp:510:1: note: in instantiation of function template specialization 'lbann::internal::EntrywiseZipInto<half_float::half, half_float::half, half_float::half, lbann::(anonymous namespace)::LogicalAndOpImpl<half_float::half>>' requested here
  510 | DEFINE_COMPUTE_OPS(LogicalAnd)
      | ^
/wrkdirs/usr/ports/misc/lbann/work/lbann-0.102-254-g2e3012a9a/src/operators/math/binary.cpp:474:15: note: expanded from macro 'DEFINE_COMPUTE_OPS'
  474 |     internal::EntrywiseZipInto(input0,                                         \
      |               ^
1 error generated.
[ 68% 319/466] /usr/bin/c++ -DH5_BUILT_AS_DYNAMIC_LIB -Dlbann_EXPORTS -I/wrkdirs/usr/ports/misc/lbann/work/.build -I/wrkdirs/usr/ports/misc/lbann/work/lbann-0.102-254-g2e3012a9a/include -isystem /wrkdirs/usr/ports/misc/lbann/work/.build/src/proto -isystem /usr/local/include/El -isystem /usr/local/include/conduit -isystem /wrkdirs/usr/ports/misc/lbann/work/Clara-2bfd8b2/include -O2 -pipe  -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing   -isystem /usr/local/include -std=c++17  -Wall -Wextra -Wno-unused-parameter -Wnon-virtual-dtor -Wshadow -Wno-deprecated-declarations -O2 -pipe  -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing   -isystem /usr/local/include -std=c++17  -DNDEBUG -fPIC -pthread -fopenmp=libomp -DCONDUIT_RELAY_IO_MPI_ENABLED -DCONDUIT_BLUEPRINT_MPI_ENABLED -MD -MT CMakeFiles/lbann.dir/src/operators/math/cereal_registration/tanh.cpp.o -MF CMakeFiles/lbann.dir/src/operators/math/cereal_registration/tanh.cpp.o.d -o 
CMakeFiles/lbann.dir/src/operators/math/cereal_registration/tanh.cpp.o -c /wrkdirs/usr/ports/misc/lbann/work/lbann-0.102-254-g2e3012a9a/src/operators/math/cereal_registration/tanh.cpp
[ 68% 319/466] /usr/bin/c++ -DH5_BUILT_AS_DYNAMIC_LIB -Dlbann_EXPORTS -I/wrkdirs/usr/ports/misc/lbann/work/.build -I/wrkdirs/usr/ports/misc/lbann/work/lbann-0.102-254-g2e3012a9a/include -isystem /wrkdirs/usr/ports/misc/lbann/work/.build/src/proto -isystem /usr/local/include/El -isystem /usr/local/include/conduit -isystem /wrkdirs/usr/ports/misc/lbann/work/Clara-2bfd8b2/include -O2 -pipe  -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing   -isystem /usr/local/include -std=c++17  -Wall -Wextra -Wno-unused-parameter -Wnon-virtual-dtor -Wshadow -Wno-deprecated-declarations -O2 -pipe  -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing   -isystem /usr/local/include -std=c++17  -DNDEBUG -fPIC -pthread -fopenmp=libomp -DCONDUIT_RELAY_IO_MPI_ENABLED -DCONDUIT_BLUEPRINT_MPI_ENABLED -MD -MT CMakeFiles/lbann.dir/src/operators/math/abs.cpp.o -MF CMakeFiles/lbann.dir/src/operators/math/abs.cpp.o.d -o CMakeFiles/lbann.dir/src/operators/math/ab
s.cpp.o -c /wrkdirs/usr/ports/misc/lbann/work/lbann-0.102-254-g2e3012a9a/src/operators/math/abs.cpp
ninja: build stopped: subcommand failed.
===> Compilation failed unexpectedly.
Try to set MAKE_JOBS_UNSAFE=yes and rebuild before reporting the failure to
the maintainer.
*** Error code 1

Stop.
make: stopped in /usr/ports/misc/lbann