[package - 133releng-armv7-default][science/libnegf] Failed for libnegf-1.1.3_3 in configure
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Date: Sat, 17 Aug 2024 14:28:55 UTC
You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.
Maintainer: yuri@FreeBSD.org
Log URL: https://pkg-status.freebsd.org/ampere3/data/133releng-armv7-default/60a177caf143/logs/libnegf-1.1.3_3.log
Build URL: https://pkg-status.freebsd.org/ampere3/build.html?mastername=133releng-armv7-default&build=60a177caf143
Log:
=>> Building science/libnegf
build started at Sat Aug 17 14:28:19 UTC 2024
port directory: /usr/ports/science/libnegf
package name: libnegf-1.1.3_3
building for: FreeBSD 133releng-armv7-default-job-11 13.3-RELEASE-p5 FreeBSD 13.3-RELEASE-p5 1303001 arm
maintained by: yuri@FreeBSD.org
Makefile datestamp: -rw-r--r-- 1 root wheel 853 Jun 27 01:08 /usr/ports/science/libnegf/Makefile
Ports top last git commit: 60a177caf14
Ports top unclean checkout: no
Port dir last git commit: e2cd1133e68
Port dir unclean checkout: no
Poudriere version: poudriere-git-3.4.1-30-g79e3edcd
Host OSVERSION: 1500019
Jail OSVERSION: 1303001
Job Id: 11
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PORT_FLAGS=
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---Begin OPTIONS List---
===> The following configuration options are available for libnegf-1.1.3_3:
INELASTIC=off: Build with inelastic scattering
MPI=on: MPI (Message Passing Interface) support
===> Use 'make config' to modify these settings
---End OPTIONS List---
--MAINTAINER--
yuri@FreeBSD.org
--End MAINTAINER--
--CONFIGURE_ARGS--
--End CONFIGURE_ARGS--
--CONFIGURE_ENV--
F77="gfortran13" F90="gfortran13" FC="gfortran13" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc13" F90FLAGS="-O -Wl,-rpath=/usr/local/lib/gcc13" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc13" PYTHON="/usr/local/bin/python3.11" XDG_DATA_HOME=/wrkdirs/usr/ports/science/libnegf/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/libnegf/work XDG_CACHE_HOME=/wrkdirs/usr/ports/science/libnegf/work/.cache HOME=/wrkdirs/usr/ports/science/libnegf/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/libnegf/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/science/libnegf/work/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--
--MAKE_ENV--
F77="gfortran13" F90="gfortran13" FC="gfortran13" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc13" F90FLAGS="-O -Wl,-rpath=/usr/local/lib/gcc13" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc13" XDG_DATA_HOME=/wrkdirs/usr/ports/science/libnegf/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/libnegf/work XDG_CACHE_HOME=/wrkdirs/usr/ports/science/libnegf/work/.cache HOME=/wrkdirs/usr/ports/science/libnegf/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/libnegf/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/science/libnegf/work/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES ADDR2LINE="/usr/local/bin/addr2line" AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/
local/bin/objdump" RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" PREFIX=/usr/local LOCALBASE=/usr/local CC="cc" CFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " CPP="cpp" CPPFLAGS="" LDFLAGS=" -Wl,-rpath=/usr/local/lib/gcc13 -L/usr/local/lib/gcc13 -fstack-protector-strong " LIBS="" CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444"
--End MAKE_ENV--
--PLIST_SUB--
CMAKE_BUILD_TYPE="release" PYTHON_INCLUDEDIR=include/python3.11 PYTHON_LIBDIR=lib/python3.11 PYTHON_PLATFORM=freebsd13 PYTHON_SITELIBDIR=lib/python3.11/site-packages PYTHON_SUFFIX=311 PYTHON_EXT_SUFFIX=.cpython-311 PYTHON_VER=3.11 PYTHON_VERSION=python3.11 PYTHON2="@comment " PYTHON3="" OSREL=13.3 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/libnegf" EXAMPLESDIR="share/examples/libnegf" DATADIR="share/libnegf" WWWDIR="www/libnegf" ETCDIR="etc/libnegf"
--End PLIST_SUB--
--SUB_LIST--
PYTHON_INCLUDEDIR=/usr/local/include/python3.11 PYTHON_LIBDIR=/usr/local/lib/python3.11 PYTHON_PLATFORM=freebsd13 PYTHON_SITELIBDIR=/usr/local/lib/python3.11/site-packages PYTHON_SUFFIX=311 PYTHON_EXT_SUFFIX=.cpython-311 PYTHON_VER=3.11 PYTHON_VERSION=python3.11 PYTHON2="@comment " PYTHON3="" PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/libnegf DOCSDIR=/usr/local/share/doc/libnegf EXAMPLESDIR=/usr/local/share/examples/libnegf WWWDIR=/usr/local/www/libnegf ETCDIR=/usr/local/etc/libnegf
--End SUB_LIST--
---Begin make.conf---
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure. It currently retries the same
# failed mirror and then fails rather then trying another. It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 3 jobs
MAKE_JOBS_NUMBER=3
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
#### ####
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure. It currently retries the same
# failed mirror and then fails rather then trying another. It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 3 jobs
MAKE_JOBS_NUMBER=3
#### Misc Poudriere ####
.include "/etc/make.conf.ports_env"
GID=0
UID=0
---End make.conf---
--Resource limits--
cpu time (seconds, -t) unlimited
file size (512-blocks, -f) unlimited
data seg size (kbytes, -d) 524288
stack size (kbytes, -s) 65536
core file size (512-blocks, -c) unlimited
max memory size (kbytes, -m) unlimited
locked memory (kbytes, -l) unlimited
max user processes (-u) 89999
open files (-n) 8192
virtual mem size (kbytes, -v) unlimited
swap limit (kbytes, -w) unlimited
socket buffer size (bytes, -b) unlimited
pseudo-terminals (-p) unlimited
kqueues (-k) unlimited
umtx shared locks (-o) unlimited
--End resource limits--
=======================<phase: check-sanity >============================
===== env: NO_DEPENDS=yes USER=root UID=0 GID=0
===> License GPLv3 accepted by the user
===========================================================================
=======================<phase: pkg-depends >============================
===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0
===> libnegf-1.1.3_3 depends on file: /usr/local/sbin/pkg - not found
===> Installing existing package /packages/All/pkg-1.21.3.pkg
[133releng-armv7-default-job-11] Installing pkg-1.21.3...
[133releng-armv7-default-job-11] Extracting pkg-1.21.3: .......... done
===> libnegf-1.1.3_3 depends on file: /usr/local/sbin/pkg - found
===> Returning to build of libnegf-1.1.3_3
===========================================================================
=======================<phase: fetch-depends >============================
===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0
===========================================================================
=======================<phase: fetch >============================
===== env: NO_DEPENDS=yes USER=root UID=0 GID=0
===> License GPLv3 accepted by the user
===> Fetching all distfiles required by libnegf-1.1.3_3 for building
===========================================================================
=======================<phase: checksum >============================
===== env: NO_DEPENDS=yes USER=root UID=0 GID=0
===> License GPLv3 accepted by the user
===> Fetching all distfiles required by libnegf-1.1.3_3 for building
=> SHA256 Checksum OK for libnegf-libnegf-v1.1.3_GH0.tar.gz.
===========================================================================
=======================<phase: extract-depends>============================
===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0
===========================================================================
=======================<phase: extract >============================
===== env: NO_DEPENDS=yes USER=root UID=0 GID=0
===> License GPLv3 accepted by the user
===> Fetching all distfiles required by libnegf-1.1.3_3 for building
===> Extracting for libnegf-1.1.3_3
=> SHA256 Checksum OK for libnegf-libnegf-v1.1.3_GH0.tar.gz.
===========================================================================
=======================<phase: patch-depends >============================
===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0
===========================================================================
=======================<phase: patch >============================
===== env: NO_DEPENDS=yes USER=root UID=0 GID=0
===> Patching for libnegf-1.1.3_3
===========================================================================
=======================<phase: build-depends >============================
===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0
===> libnegf-1.1.3_3 depends on file: /usr/local/bin/cmake - not found
===> Installing existing package /packages/All/cmake-core-3.30.2.pkg
[133releng-armv7-default-job-11] Installing cmake-core-3.30.2...
[133releng-armv7-default-job-11] `-- Installing expat-2.6.2...
[133releng-armv7-default-job-11] `-- Extracting expat-2.6.2: .......... done
[133releng-armv7-default-job-11] `-- Installing jsoncpp-1.9.5...
[133releng-armv7-default-job-11] `-- Extracting jsoncpp-1.9.5: .......... done
[133releng-armv7-default-job-11] `-- Installing libuv-1.48.0...
[133releng-armv7-default-job-11] `-- Extracting libuv-1.48.0: .......... done
[133releng-armv7-default-job-11] `-- Installing rhash-1.4.4_1...
[133releng-armv7-default-job-11] | `-- Installing gettext-runtime-0.22.5...
[133releng-armv7-default-job-11] | | `-- Installing indexinfo-0.3.1...
[133releng-armv7-default-job-11] | | `-- Extracting indexinfo-0.3.1: .... done
[133releng-armv7-default-job-11] | `-- Extracting gettext-runtime-0.22.5: .......... done
[133releng-armv7-default-job-11] `-- Extracting rhash-1.4.4_1: .......... done
[133releng-armv7-default-job-11] Extracting cmake-core-3.30.2: .......... done
===> libnegf-1.1.3_3 depends on file: /usr/local/bin/cmake - found
===> Returning to build of libnegf-1.1.3_3
===> libnegf-1.1.3_3 depends on executable: gfortran13 - not found
===> Installing existing package /packages/All/gcc13-13.2.0_4.pkg
[133releng-armv7-default-job-11] Installing gcc13-13.2.0_4...
[133releng-armv7-default-job-11] `-- Installing binutils-2.40_6,1...
[133releng-armv7-default-job-11] | `-- Installing zstd-1.5.6...
[133releng-armv7-default-job-11] | | `-- Installing liblz4-1.10.0,1...
[133releng-armv7-default-job-11] | | `-- Extracting liblz4-1.10.0,1: .......... done
[133releng-armv7-default-job-11] | `-- Extracting zstd-1.5.6: .......... done
[133releng-armv7-default-job-11] `-- Extracting binutils-2.40_6,1: .......... done
[133releng-armv7-default-job-11] `-- Installing gmp-6.3.0...
[133releng-armv7-default-job-11] `-- Extracting gmp-6.3.0: .......... done
[133releng-armv7-default-job-11] `-- Installing mpc-1.3.1_1...
[133releng-armv7-default-job-11] | `-- Installing mpfr-4.2.1,1...
[133releng-armv7-default-job-11] | `-- Extracting mpfr-4.2.1,1: .......... done
[133releng-armv7-default-job-11] `-- Extracting mpc-1.3.1_1: ......... done
[133releng-armv7-default-job-11] Extracting gcc13-13.2.0_4: .......... done
=====
Message from gcc13-13.2.0_4:
--
To ensure binaries built with this toolchain find appropriate versions
of the necessary run-time libraries, you may want to link using
-Wl,-rpath=/usr/local/lib/gcc13
For ports leveraging USE_GCC, USES=compiler, or USES=fortran this happens
transparently.
===> libnegf-1.1.3_3 depends on executable: gfortran13 - found
===> Returning to build of libnegf-1.1.3_3
===> libnegf-1.1.3_3 depends on file: /usr/local/bin/python3.11 - not found
===> Installing existing package /packages/All/python311-3.11.9_1.pkg
[133releng-armv7-default-job-11] Installing python311-3.11.9_1...
[133releng-armv7-default-job-11] `-- Installing libffi-3.4.6...
[133releng-armv7-default-job-11] `-- Extracting libffi-3.4.6: .......... done
[133releng-armv7-default-job-11] `-- Installing mpdecimal-4.0.0...
[133releng-armv7-default-job-11] `-- Extracting mpdecimal-4.0.0: .......... done
[133releng-armv7-default-job-11] `-- Installing readline-8.2.10...
[133releng-armv7-default-job-11] `-- Extracting readline-8.2.10: .......... done
[133releng-armv7-default-job-11] Extracting python311-3.11.9_1: .......... done
=====
Message from python311-3.11.9_1:
--
Note that some standard Python modules are provided as separate ports
as they require additional dependencies. They are available as:
py311-gdbm databases/py-gdbm@py311
py311-sqlite3 databases/py-sqlite3@py311
py311-tkinter x11-toolkits/py-tkinter@py311
===> libnegf-1.1.3_3 depends on file: /usr/local/bin/python3.11 - found
===> Returning to build of libnegf-1.1.3_3
===> libnegf-1.1.3_3 depends on file: /usr/local/bin/as - found
===========================================================================
=======================<phase: lib-depends >============================
===== env: USE_PACKAGE_DEPENDS_ONLY=1 USER=root UID=0 GID=0
===> libnegf-1.1.3_3 depends on shared library: libmpi.so - not found
===> Installing existing package /packages/All/mpich-4.2.2.pkg
[133releng-armv7-default-job-11] Installing mpich-4.2.2...
[133releng-armv7-default-job-11] `-- Installing hwloc2-2.8.0_1...
[133releng-armv7-default-job-11] | `-- Installing level-zero-1.17.25...
[133releng-armv7-default-job-11] | | `-- Installing libfmt-10.2.1...
[133releng-armv7-default-job-11] | | `-- Extracting libfmt-10.2.1: .......... done
[133releng-armv7-default-job-11] | | `-- Installing spdlog-1.14.1...
[133releng-armv7-default-job-11] | | `-- Extracting spdlog-1.14.1: .......... done
[133releng-armv7-default-job-11] | `-- Extracting level-zero-1.17.25: .......... done
[133releng-armv7-default-job-11] | `-- Installing libpciaccess-0.18.1...
[133releng-armv7-default-job-11] | `-- Extracting libpciaccess-0.18.1: ........ done
[133releng-armv7-default-job-11] | `-- Installing libxml2-2.11.8...
[133releng-armv7-default-job-11] | `-- Extracting libxml2-2.11.8: .......... done
[133releng-armv7-default-job-11] `-- Extracting hwloc2-2.8.0_1: .......... done
[133releng-armv7-default-job-11] `-- Installing json-c-0.17...
[133releng-armv7-default-job-11] `-- Extracting json-c-0.17: .......... done
[133releng-armv7-default-job-11] `-- Installing libepoll-shim-0.0.20240608...
[133releng-armv7-default-job-11] `-- Extracting libepoll-shim-0.0.20240608: .......... done
[133releng-armv7-default-job-11] `-- Installing libfabric-1.15.1_2...
[133releng-armv7-default-job-11] `-- Extracting libfabric-1.15.1_2: .......... done
[133releng-armv7-default-job-11] `-- Installing perl5-5.36.3_1...
[133releng-armv7-default-job-11] `-- Extracting perl5-5.36.3_1: .......... done
[133releng-armv7-default-job-11] Extracting mpich-4.2.2: .......... done
===> libnegf-1.1.3_3 depends on shared library: libmpi.so - found (/usr/local/lib/libmpi.so)
===> Returning to build of libnegf-1.1.3_3
===> libnegf-1.1.3_3 depends on shared library: libopenblas.so - not found
===> Installing existing package /packages/All/openblas-0.3.27,2.pkg
[133releng-armv7-default-job-11] Installing openblas-0.3.27,2...
[133releng-armv7-default-job-11] Extracting openblas-0.3.27,2: .......... done
===> libnegf-1.1.3_3 depends on shared library: libopenblas.so - found (/usr/local/lib/libopenblas.so)
===> Returning to build of libnegf-1.1.3_3
===> libnegf-1.1.3_3 depends on shared library: libmpifx.so - not found
===> Installing existing package /packages/All/mpifx-1.5.pkg
[133releng-armv7-default-job-11] Installing mpifx-1.5...
[133releng-armv7-default-job-11] Extracting mpifx-1.5: .......... done
===> libnegf-1.1.3_3 depends on shared library: libmpifx.so - found (/usr/local/lib/libmpifx.so)
===> Returning to build of libnegf-1.1.3_3
===========================================================================
=======================<phase: configure >============================
===== env: NO_DEPENDS=yes USER=root UID=0 GID=0
===> Configuring for libnegf-1.1.3_3
===> Performing out-of-source build
/bin/mkdir -p /wrkdirs/usr/ports/science/libnegf/work/.build
-- Reading global build config file: /wrkdirs/usr/ports/science/libnegf/work/libnegf-1.1.3/config.cmake
-- The Fortran compiler identification is GNU 13.2.0
-- The C compiler identification is Clang 17.0.6
-- Detecting Fortran compiler ABI info
-- Detecting Fortran compiler ABI info - done
-- Check for working Fortran compiler: /usr/local/bin/gfortran13 - skipped
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /usr/bin/cc - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- libNEGF WITH_MPI: true
-- libNEGF WITH_INELASTIC: false
-- libNEGF MKLROOT:
-- searching default BLAS ...
-- Looking for Fortran sgemm
-- Looking for Fortran sgemm - not found
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Failed
-- Looking for pthread_create in pthreads
-- Looking for pthread_create in pthreads - not found
-- Looking for pthread_create in pthread
-- Looking for pthread_create in pthread - found
-- Found Threads: TRUE
-- Looking for Fortran sgemm
-- Looking for Fortran sgemm - found
-- Found BLAS: /usr/local/lib/libopenblas.so
-- Found CustomBlas: /usr/local/lib/libopenblas.so
-- Looking for Fortran cheev
-- Looking for Fortran cheev - found
-- Found LAPACK: /usr/local/lib/libopenblas.so;-lpthread;-lm;-ldl
-- Found CustomLapack: /usr/local/lib/libopenblas.so;-lpthread;-lm;-ldl
-- Found MPI_C: /usr/local/lib/libmpi.so (found version "4.1")
-- Found MPI_Fortran: /usr/local/lib/libmpifort.so (found version "4.1")
-- Found MPI: TRUE (found version "4.1")
-- Found installed MpiFx package
CMake Error at /usr/local/share/cmake/Modules/FindPackageHandleStandardArgs.cmake:233 (message):
Could NOT find OpenMP_C (missing: OpenMP_C_FLAGS OpenMP_C_LIB_NAMES)
Call Stack (most recent call first):
/usr/local/share/cmake/Modules/FindPackageHandleStandardArgs.cmake:603 (_FPHSA_FAILURE_MESSAGE)
/usr/local/share/cmake/Modules/FindOpenMP.cmake:600 (find_package_handle_standard_args)
CMakeLists.txt:41 (find_package)
-- Configuring incomplete, errors occurred!
*** Error code 1
Stop.
make: stopped in /usr/ports/science/libnegf