[package - 140releng-amd64-quarterly][science/liggghts] Failed for liggghts-3.8.0.58_4 in build
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Date: Tue, 10 Oct 2023 17:45:47 UTC
You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.
Maintainer: yuri@FreeBSD.org
Log URL: https://pkg-status.freebsd.org/beefy8/data/140releng-amd64-quarterly/2b5c95373997/logs/liggghts-3.8.0.58_4.log
Build URL: https://pkg-status.freebsd.org/beefy8/build.html?mastername=140releng-amd64-quarterly&build=2b5c95373997
Log:
=>> Building science/liggghts
build started at Tue Oct 10 17:44:20 UTC 2023
port directory: /usr/ports/science/liggghts
package name: liggghts-3.8.0.58_4
building for: FreeBSD 140releng-amd64-quarterly-job-07 14.0-BETA5 FreeBSD 14.0-BETA5 1400097 amd64
maintained by: yuri@FreeBSD.org
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=======================<phase: check-sanity >============================
===> License GPLv2 accepted by the user
===========================================================================
=======================<phase: pkg-depends >============================
===> liggghts-3.8.0.58_4 depends on file: /usr/local/sbin/pkg - not found
===> Installing existing package /packages/All/pkg-1.20.7.pkg
[140releng-amd64-quarterly-job-07] Installing pkg-1.20.7...
[140releng-amd64-quarterly-job-07] Extracting pkg-1.20.7: .......... done
===> liggghts-3.8.0.58_4 depends on file: /usr/local/sbin/pkg - found
===> Returning to build of liggghts-3.8.0.58_4
===========================================================================
=======================<phase: fetch-depends >============================
===========================================================================
=======================<phase: fetch >============================
===> License GPLv2 accepted by the user
=> CFDEMproject-LIGGGHTS-PUBLIC-3.8.0-58-g6e28cfe3_GH0.tar.gz doesn't seem to exist in /portdistfiles/.
=> Attempting to fetch https://codeload.github.com/CFDEMproject/LIGGGHTS-PUBLIC/tar.gz/3.8.0-58-g6e28cfe3?dummy=/CFDEMproject-LIGGGHTS-PUBLIC-3.8.0-58-g6e28cfe3_GH0.tar.gz
fetch: https://codeload.github.com/CFDEMproject/LIGGGHTS-PUBLIC/tar.gz/3.8.0-58-g6e28cfe3?dummy=/CFDEMproject-LIGGGHTS-PUBLIC-3.8.0-58-g6e28cfe3_GH0.tar.gz: size unknown
fetch: https://codeload.github.com/CFDEMproject/LIGGGHTS-PUBLIC/tar.gz/3.8.0-58-g6e28cfe3?dummy=/CFDEMproject-LIGGGHTS-PUBLIC-3.8.0-58-g6e28cfe3_GH0.tar.gz: size of remote file is not known
CFDEMproject-LIGGGHTS-PUBLIC-3.8.0-58-g6e28cfe3_GH0.tar.gz 34 MB 9952 kBps 03s
===> Fetching all distfiles required by liggghts-3.8.0.58_4 for building
===========================================================================
=======================<phase: checksum >============================
===> License GPLv2 accepted by the user
===> Fetching all distfiles required by liggghts-3.8.0.58_4 for building
=> SHA256 Checksum OK for CFDEMproject-LIGGGHTS-PUBLIC-3.8.0-58-g6e28cfe3_GH0.tar.gz.
===========================================================================
=======================<phase: extract-depends>============================
===========================================================================
=======================<phase: extract >============================
===> License GPLv2 accepted by the user
===> Fetching all distfiles required by liggghts-3.8.0.58_4 for building
===> Extracting for liggghts-3.8.0.58_4
=> SHA256 Checksum OK for CFDEMproject-LIGGGHTS-PUBLIC-3.8.0-58-g6e28cfe3_GH0.tar.gz.
===========================================================================
=======================<phase: patch-depends >============================
===========================================================================
=======================<phase: patch >============================
===> Patching for liggghts-3.8.0.58_4
===> Applying FreeBSD patches for liggghts-3.8.0.58_4 from /usr/ports/science/liggghts/files
===========================================================================
=======================<phase: build-depends >============================
===> liggghts-3.8.0.58_4 depends on executable: gsed - not found
===> Installing existing package /packages/All/gsed-4.9.pkg
[140releng-amd64-quarterly-job-07] Installing gsed-4.9...
[140releng-amd64-quarterly-job-07] `-- Installing gettext-runtime-0.22_1...
[140releng-amd64-quarterly-job-07] | `-- Installing indexinfo-0.3.1...
[140releng-amd64-quarterly-job-07] | `-- Extracting indexinfo-0.3.1: .... done
[140releng-amd64-quarterly-job-07] `-- Extracting gettext-runtime-0.22_1: .......... done
[140releng-amd64-quarterly-job-07] Extracting gsed-4.9: .......... done
<snip>
consolekit2 (via ck-launch-session) or pam_xdg (via login).
=====
Message from libxkbcommon-1.5.0:
--
If arrow keys don't work under X11 switch to legacy rules e.g.,
For sh/bash/ksh/zsh run and (optionally) add into ~/.profile:
export XKB_DEFAULT_RULES=xorg
For csh/tcsh run and (optionally) add into ~/.login:
setenv XKB_DEFAULT_RULES xorg
=====
Message from dejavu-2.37_3:
--
Make sure that the freetype module is loaded. If it is not, add the following
line to the "Modules" section of your X Windows configuration file:
Load "freetype"
Add the following line to the "Files" section of X Windows configuration file:
FontPath "/usr/local/share/fonts/dejavu/"
Note: your X Windows configuration file is typically /etc/X11/XF86Config
if you are using XFree86, and /etc/X11/xorg.conf if you are using X.Org.
=====
Message from qt5-sql-5.15.10p156:
--
To enable Qt database support, install the database plugin ports. The
following plugin ports are available:
- databases/qt5-sqldrivers-ibase InterBase/Firebird
- databases/qt5-sqldrivers-mysql MySQL
- databases/qt5-sqldrivers-odbc Open Database Connectivity
- databases/qt5-sqldrivers-pgsql PostgreSQL
- databases/qt5-sqldrivers-sqlite2 SQLite 2
- databases/qt5-sqldrivers-sqlite3 SQLite 3
- databases/qt5-sqldrivers-tds FreeTDS
===> liggghts-3.8.0.58_4 depends on shared library: libvtkViewsCore-9.2.so - found (/usr/local/lib/libvtkViewsCore-9.2.so)
===> Returning to build of liggghts-3.8.0.58_4
===> liggghts-3.8.0.58_4 depends on shared library: libGL.so - found (/usr/local/lib/libGL.so)
===> liggghts-3.8.0.58_4 depends on shared library: libjpeg.so - found (/usr/local/lib/libjpeg.so)
===> liggghts-3.8.0.58_4 depends on shared library: libQt5Core.so - found (/usr/local/lib/qt5/libQt5Core.so)
===> liggghts-3.8.0.58_4 depends on shared library: libQt5Qml.so - found (/usr/local/lib/qt5/libQt5Qml.so)
===> liggghts-3.8.0.58_4 depends on shared library: libQt5Gui.so - found (/usr/local/lib/qt5/libQt5Gui.so)
===> liggghts-3.8.0.58_4 depends on shared library: libQt5Network.so - found (/usr/local/lib/qt5/libQt5Network.so)
===> liggghts-3.8.0.58_4 depends on shared library: libQt5OpenGL.so - found (/usr/local/lib/qt5/libQt5OpenGL.so)
===> liggghts-3.8.0.58_4 depends on shared library: libQt5Sql.so - found (/usr/local/lib/qt5/libQt5Sql.so)
===> liggghts-3.8.0.58_4 depends on shared library: libQt5Widgets.so - found (/usr/local/lib/qt5/libQt5Widgets.so)
===========================================================================
=======================<phase: configure >============================
===> Configuring for liggghts-3.8.0.58_4
===> Performing out-of-source build
/bin/mkdir -p /wrkdirs/usr/ports/science/liggghts/work/.build
CMake Warning (dev) at CMakeLists.txt:1 (PROJECT):
cmake_minimum_required() should be called prior to this top-level project()
call. Please see the cmake-commands(7) manual for usage documentation of
both commands.
This warning is for project developers. Use -Wno-dev to suppress it.
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-- The CXX compiler identification is Clang 16.0.6
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /usr/bin/cc - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /usr/bin/c++ - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Compiler: clang
-- There are 4 contact model combinations
-- Found MPI_C: /usr/local/mpi/openmpi/lib/libmpi.so (found version "3.1")
-- Found MPI_CXX: /usr/local/mpi/openmpi/lib/libmpi_cxx.so (found version "3.1")
-- Found MPI: TRUE (found version "3.1")
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Failed
-- Looking for pthread_create in pthreads
-- Looking for pthread_create in pthreads - not found
-- Looking for pthread_create in pthread
-- Looking for pthread_create in pthread - found
-- Found Threads: TRUE
-- Found OpenGL: /usr/local/lib/libOpenGL.so found components: OpenGL GLX
-- Found Python3: /usr/local/bin/python3.9 (found suitable version "3.9.18", minimum required is "3.9") found components: Interpreter Development.Module Development.Embed
-- Found HDF5: hdf5-shared (found version "1.12.2") found components: C HL
-- Found NetCDF: netcdf (found version "4.9.2")
-- Found ZLIB: /usr/lib/libz.so (found version "1.3")
-- Found PNG: /usr/local/lib/libpng.so (found version "1.6.40")
-- Found MPI: TRUE (found version "3.1") found components: C
-- Found X11: /usr/local/include
-- Looking for XOpenDisplay in /usr/local/lib/libX11.so;/usr/local/lib/libXext.so
-- Looking for XOpenDisplay in /usr/local/lib/libX11.so;/usr/local/lib/libXext.so - found
-- Looking for gethostbyname
-- Looking for gethostbyname - found
-- Looking for connect
-- Looking for connect - found
-- Looking for remove
-- Looking for remove - found
-- Looking for shmat
-- Looking for shmat - found
-- Looking for IceConnectionNumber in ICE
-- Looking for IceConnectionNumber in ICE - found
-- Found EXPAT: /usr/local/lib/libexpat.so (found version "2.5.0")
-- Found JPEG: /usr/local/lib/libjpeg.so (found version "80")
-- Found TIFF: /usr/local/lib/libtiff.so (found version "4.4.0")
-- Found Freetype: /usr/local/lib/libfreetype.so (found version "2.13.1")
CMake Deprecation Warning at /usr/local/lib/cmake/vtk-9.2/vtk-use-file-deprecated.cmake:1 (message):
The `VTK_USE_FILE` is no longer used starting with 8.90.
Call Stack (most recent call first):
CMakeLists.txt:329 (INCLUDE)
-- Found VTK: version 9.2.6
-- =======================================
-- liggghts 3.8.0
-- Enabled options: MPI VTK SMALLBIG
-- Disabled options: JPEG PNG FFMPEG GZIP SQ
-- Enabled models: HERTZ TANGENTIAL_HISTORY TANGENTIAL_NO_HISTORY COHESION_SJKR COHESION_SJKR2 ROLLING_EPSD2 SURFACE_DEFAULT
-- =======================================
-- Configuring done (9.1s)
-- Generating done (0.1s)
CMake Warning:
Manually-specified variables were not used by the project:
BOOST_PYTHON_SUFFIX
CMAKE_CXX_FLAGS_DEBUG
CMAKE_C_FLAGS_RELEASE
CMAKE_MODULE_LINKER_FLAGS
FETCHCONTENT_FULLY_DISCONNECTED
Python_ADDITIONAL_VERSIONS
Python_EXECUTABLE
-- Build files have been written to: /wrkdirs/usr/ports/science/liggghts/work/.build
===========================================================================
=======================<phase: build >============================
===> Building for liggghts-3.8.0.58_4
/usr/local/bin/cmake -S/wrkdirs/usr/ports/science/liggghts/work/LIGGGHTS-PUBLIC-3.8.0-58-g6e28cfe3/src -B/wrkdirs/usr/ports/science/liggghts/work/.build --check-build-system CMakeFiles/Makefile.cmake 0
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/usr/bin/make -f CMakeFiles/Makefile2 all
/usr/bin/make -f CMakeFiles/liggghts_obj.dir/build.make CMakeFiles/liggghts_obj.dir/depend
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