[package - main-powerpc64-default][biology/seqwish] Failed for seqwish-0.7.9 in build
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Date: Fri, 06 Oct 2023 20:45:42 UTC
You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.
Maintainer: yuri@FreeBSD.org
Log URL: https://pkg-status.freebsd.org/foul1/data/main-powerpc64-default/p3b548e384d0b_sfc4a676827/logs/seqwish-0.7.9.log
Build URL: https://pkg-status.freebsd.org/foul1/build.html?mastername=main-powerpc64-default&build=p3b548e384d0b_sfc4a676827
Log:
=>> Building biology/seqwish
build started at Fri Oct 6 20:40:10 UTC 2023
port directory: /usr/ports/biology/seqwish
package name: seqwish-0.7.9
building for: FreeBSD main-powerpc64-default-job-09 15.0-CURRENT FreeBSD 15.0-CURRENT 1500001 powerpc
maintained by: yuri@FreeBSD.org
Makefile ident:
Poudriere version: 3.2.8-23-ga7f8d188
Host OSVERSION: 1500000
Jail OSVERSION: 1500001
Job Id: 09
!!! Jail is newer than host. (Jail: 1500001, Host: 1500000) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!
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---Begin OPTIONS List---
===> The following configuration options are available for seqwish-0.7.9:
OPENMP=on: Parallel processing support via OpenMP
===> Use 'make config' to modify these settings
---End OPTIONS List---
--MAINTAINER--
yuri@FreeBSD.org
--End MAINTAINER--
--CONFIGURE_ARGS--
--End CONFIGURE_ARGS--
--CONFIGURE_ENV--
XDG_DATA_HOME=/wrkdirs/usr/ports/biology/seqwish/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/seqwish/work XDG_CACHE_HOME=/wrkdirs/usr/ports/biology/seqwish/work/.cache HOME=/wrkdirs/usr/ports/biology/seqwish/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/biology/seqwish/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/biology/seqwish/work/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig SHELL=/bin/sh CONFIG_SHELL=/bin/sh
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=======================<phase: check-sanity >============================
===> License MIT accepted by the user
===========================================================================
=======================<phase: pkg-depends >============================
===> seqwish-0.7.9 depends on file: /usr/local/sbin/pkg - not found
===> Installing existing package /packages/All/pkg-1.20.7.pkg
[main-powerpc64-default-job-09] Installing pkg-1.20.7...
[main-powerpc64-default-job-09] Extracting pkg-1.20.7: .......... done
===> seqwish-0.7.9 depends on file: /usr/local/sbin/pkg - found
===> Returning to build of seqwish-0.7.9
===========================================================================
=======================<phase: fetch-depends >============================
===========================================================================
=======================<phase: fetch >============================
===> License MIT accepted by the user
=> seqwish-v0.7.9.tar.gz doesn't seem to exist in /portdistfiles/.
=> Attempting to fetch https://github.com/ekg/seqwish/releases/download/v0.7.9/seqwish-v0.7.9.tar.gz
seqwish-v0.7.9.tar.gz 11 MB 67 MBps 00s
===> Fetching all distfiles required by seqwish-0.7.9 for building
===========================================================================
=======================<phase: checksum >============================
===> License MIT accepted by the user
===> Fetching all distfiles required by seqwish-0.7.9 for building
=> SHA256 Checksum OK for seqwish-v0.7.9.tar.gz.
===========================================================================
=======================<phase: extract-depends>============================
===========================================================================
=======================<phase: extract >============================
===> License MIT accepted by the user
===> Fetching all distfiles required by seqwish-0.7.9 for building
===> Extracting for seqwish-0.7.9
=> SHA256 Checksum OK for seqwish-v0.7.9.tar.gz.
===========================================================================
=======================<phase: patch-depends >============================
===========================================================================
=======================<phase: patch >============================
===> Patching for seqwish-0.7.9
===> Applying FreeBSD patches for seqwish-0.7.9 from /usr/ports/biology/seqwish/files
<snip>
^~~~~~~~~~~~~~~
::atomic_queue::spin_loop_pause
/wrkdirs/usr/ports/biology/seqwish/work/seqwish-v0.7.9/deps/atomic_queue/include/atomic_queue/defs.h:41:20: note: '::atomic_queue::spin_loop_pause' declared here
static inline void spin_loop_pause() noexcept {
^
In file included from /wrkdirs/usr/ports/biology/seqwish/work/seqwish-v0.7.9/src/main.cpp:14:
In file included from /wrkdirs/usr/ports/biology/seqwish/work/seqwish-v0.7.9/src/transclosure.hpp:22:
/wrkdirs/usr/ports/biology/seqwish/work/seqwish-v0.7.9/deps/paryfor/paryfor.hpp:242:21: error: use of undeclared identifier 'spin_loop_pause'; did you mean '::atomic_queue::spin_loop_pause'?
spin_loop_pause();
^~~~~~~~~~~~~~~
::atomic_queue::spin_loop_pause
/wrkdirs/usr/ports/biology/seqwish/work/seqwish-v0.7.9/deps/atomic_queue/include/atomic_queue/defs.h:41:20: note: '::atomic_queue::spin_loop_pause' declared here
static inline void spin_loop_pause() noexcept {
^
In file included from /wrkdirs/usr/ports/biology/seqwish/work/seqwish-v0.7.9/src/main.cpp:14:
In file included from /wrkdirs/usr/ports/biology/seqwish/work/seqwish-v0.7.9/src/transclosure.hpp:22:
/wrkdirs/usr/ports/biology/seqwish/work/seqwish-v0.7.9/deps/paryfor/paryfor.hpp:254:21: error: use of undeclared identifier 'spin_loop_pause'; did you mean '::atomic_queue::spin_loop_pause'?
spin_loop_pause();
^~~~~~~~~~~~~~~
::atomic_queue::spin_loop_pause
/wrkdirs/usr/ports/biology/seqwish/work/seqwish-v0.7.9/deps/atomic_queue/include/atomic_queue/defs.h:41:20: note: '::atomic_queue::spin_loop_pause' declared here
static inline void spin_loop_pause() noexcept {
^
In file included from /wrkdirs/usr/ports/biology/seqwish/work/seqwish-v0.7.9/src/main.cpp:14:
In file included from /wrkdirs/usr/ports/biology/seqwish/work/seqwish-v0.7.9/src/transclosure.hpp:22:
/wrkdirs/usr/ports/biology/seqwish/work/seqwish-v0.7.9/deps/paryfor/paryfor.hpp:260:21: error: use of undeclared identifier 'spin_loop_pause'; did you mean '::atomic_queue::spin_loop_pause'?
spin_loop_pause(); // (1) Wait for store (2) to complete.
^~~~~~~~~~~~~~~
::atomic_queue::spin_loop_pause
/wrkdirs/usr/ports/biology/seqwish/work/seqwish-v0.7.9/deps/atomic_queue/include/atomic_queue/defs.h:41:20: note: '::atomic_queue::spin_loop_pause' declared here
static inline void spin_loop_pause() noexcept {
^
In file included from /wrkdirs/usr/ports/biology/seqwish/work/seqwish-v0.7.9/src/main.cpp:14:
In file included from /wrkdirs/usr/ports/biology/seqwish/work/seqwish-v0.7.9/src/transclosure.hpp:22:
/wrkdirs/usr/ports/biology/seqwish/work/seqwish-v0.7.9/deps/paryfor/paryfor.hpp:273:21: error: use of undeclared identifier 'spin_loop_pause'; did you mean '::atomic_queue::spin_loop_pause'?
spin_loop_pause();
^~~~~~~~~~~~~~~
::atomic_queue::spin_loop_pause
/wrkdirs/usr/ports/biology/seqwish/work/seqwish-v0.7.9/deps/atomic_queue/include/atomic_queue/defs.h:41:20: note: '::atomic_queue::spin_loop_pause' declared here
static inline void spin_loop_pause() noexcept {
^
In file included from /wrkdirs/usr/ports/biology/seqwish/work/seqwish-v0.7.9/src/main.cpp:14:
In file included from /wrkdirs/usr/ports/biology/seqwish/work/seqwish-v0.7.9/src/transclosure.hpp:22:
/wrkdirs/usr/ports/biology/seqwish/work/seqwish-v0.7.9/deps/paryfor/paryfor.hpp:288:21: error: use of undeclared identifier 'spin_loop_pause'; did you mean '::atomic_queue::spin_loop_pause'?
spin_loop_pause();
^~~~~~~~~~~~~~~
::atomic_queue::spin_loop_pause
/wrkdirs/usr/ports/biology/seqwish/work/seqwish-v0.7.9/deps/atomic_queue/include/atomic_queue/defs.h:41:20: note: '::atomic_queue::spin_loop_pause' declared here
static inline void spin_loop_pause() noexcept {
^
In file included from /wrkdirs/usr/ports/biology/seqwish/work/seqwish-v0.7.9/src/main.cpp:14:
In file included from /wrkdirs/usr/ports/biology/seqwish/work/seqwish-v0.7.9/src/transclosure.hpp:22:
/wrkdirs/usr/ports/biology/seqwish/work/seqwish-v0.7.9/deps/paryfor/paryfor.hpp:299:21: error: use of undeclared identifier 'spin_loop_pause'; did you mean '::atomic_queue::spin_loop_pause'?
spin_loop_pause();
^~~~~~~~~~~~~~~
::atomic_queue::spin_loop_pause
/wrkdirs/usr/ports/biology/seqwish/work/seqwish-v0.7.9/deps/atomic_queue/include/atomic_queue/defs.h:41:20: note: '::atomic_queue::spin_loop_pause' declared here
static inline void spin_loop_pause() noexcept {
^
In file included from /wrkdirs/usr/ports/biology/seqwish/work/seqwish-v0.7.9/src/main.cpp:14:
In file included from /wrkdirs/usr/ports/biology/seqwish/work/seqwish-v0.7.9/src/transclosure.hpp:22:
/wrkdirs/usr/ports/biology/seqwish/work/seqwish-v0.7.9/deps/paryfor/paryfor.hpp:313:21: error: use of undeclared identifier 'spin_loop_pause'; did you mean '::atomic_queue::spin_loop_pause'?
spin_loop_pause();
^~~~~~~~~~~~~~~
::atomic_queue::spin_loop_pause
/wrkdirs/usr/ports/biology/seqwish/work/seqwish-v0.7.9/deps/atomic_queue/include/atomic_queue/defs.h:41:20: note: '::atomic_queue::spin_loop_pause' declared here
static inline void spin_loop_pause() noexcept {
^
In file included from /wrkdirs/usr/ports/biology/seqwish/work/seqwish-v0.7.9/src/main.cpp:14:
In file included from /wrkdirs/usr/ports/biology/seqwish/work/seqwish-v0.7.9/src/transclosure.hpp:22:
/wrkdirs/usr/ports/biology/seqwish/work/seqwish-v0.7.9/deps/paryfor/paryfor.hpp:406:98: error: use of undeclared identifier 'CACHE_LINE_SIZE'; did you mean '::atomic_queue::CACHE_LINE_SIZE'?
static constexpr int SHUFFLE_BITS = details::GetIndexShuffleBits<MINIMIZE_CONTENTION, size_, CACHE_LINE_SIZE / sizeof(std::atomic<T>)>::value;
^~~~~~~~~~~~~~~
::atomic_queue::CACHE_LINE_SIZE
/wrkdirs/usr/ports/biology/seqwish/work/seqwish-v0.7.9/deps/atomic_queue/include/atomic_queue/defs.h:40:15: note: '::atomic_queue::CACHE_LINE_SIZE' declared here
constexpr int CACHE_LINE_SIZE = 128; // TODO: Review that this is the correct value.
^
In file included from /wrkdirs/usr/ports/biology/seqwish/work/seqwish-v0.7.9/src/main.cpp:14:
In file included from /wrkdirs/usr/ports/biology/seqwish/work/seqwish-v0.7.9/src/transclosure.hpp:22:
/wrkdirs/usr/ports/biology/seqwish/work/seqwish-v0.7.9/deps/paryfor/paryfor.hpp:411:13: error: use of undeclared identifier 'CACHE_LINE_SIZE'; did you mean '::atomic_queue::CACHE_LINE_SIZE'?
alignas(CACHE_LINE_SIZE) std::atomic<T> elements_[size_] = {}; // Empty elements are NIL.
^~~~~~~~~~~~~~~
::atomic_queue::CACHE_LINE_SIZE
/wrkdirs/usr/ports/biology/seqwish/work/seqwish-v0.7.9/deps/atomic_queue/include/atomic_queue/defs.h:40:15: note: '::atomic_queue::CACHE_LINE_SIZE' declared here
constexpr int CACHE_LINE_SIZE = 128; // TODO: Review that this is the correct value.
^
In file included from /wrkdirs/usr/ports/biology/seqwish/work/seqwish-v0.7.9/src/main.cpp:14:
In file included from /wrkdirs/usr/ports/biology/seqwish/work/seqwish-v0.7.9/src/transclosure.hpp:22:
/wrkdirs/usr/ports/biology/seqwish/work/seqwish-v0.7.9/deps/paryfor/paryfor.hpp:446:98: error: use of undeclared identifier 'CACHE_LINE_SIZE'; did you mean '::atomic_queue::CACHE_LINE_SIZE'?
static constexpr int SHUFFLE_BITS = details::GetIndexShuffleBits<MINIMIZE_CONTENTION, size_, CACHE_LINE_SIZE / sizeof(State)>::value;
^~~~~~~~~~~~~~~
::atomic_queue::CACHE_LINE_SIZE
/wrkdirs/usr/ports/biology/seqwish/work/seqwish-v0.7.9/deps/atomic_queue/include/atomic_queue/defs.h:40:15: note: '::atomic_queue::CACHE_LINE_SIZE' declared here
constexpr int CACHE_LINE_SIZE = 128; // TODO: Review that this is the correct value.
^
In file included from /wrkdirs/usr/ports/biology/seqwish/work/seqwish-v0.7.9/src/main.cpp:14:
In file included from /wrkdirs/usr/ports/biology/seqwish/work/seqwish-v0.7.9/src/transclosure.hpp:22:
/wrkdirs/usr/ports/biology/seqwish/work/seqwish-v0.7.9/deps/paryfor/paryfor.hpp:451:13: error: use of undeclared identifier 'CACHE_LINE_SIZE'; did you mean '::atomic_queue::CACHE_LINE_SIZE'?
alignas(CACHE_LINE_SIZE) std::atomic<unsigned char> states_[size_] = {};
^~~~~~~~~~~~~~~
::atomic_queue::CACHE_LINE_SIZE
/wrkdirs/usr/ports/biology/seqwish/work/seqwish-v0.7.9/deps/atomic_queue/include/atomic_queue/defs.h:40:15: note: '::atomic_queue::CACHE_LINE_SIZE' declared here
constexpr int CACHE_LINE_SIZE = 128; // TODO: Review that this is the correct value.
^
In file included from /wrkdirs/usr/ports/biology/seqwish/work/seqwish-v0.7.9/src/main.cpp:14:
In file included from /wrkdirs/usr/ports/biology/seqwish/work/seqwish-v0.7.9/src/transclosure.hpp:22:
/wrkdirs/usr/ports/biology/seqwish/work/seqwish-v0.7.9/deps/paryfor/paryfor.hpp:452:13: error: use of undeclared identifier 'CACHE_LINE_SIZE'; did you mean '::atomic_queue::CACHE_LINE_SIZE'?
alignas(CACHE_LINE_SIZE) T elements_[size_] = {};
^~~~~~~~~~~~~~~
::atomic_queue::CACHE_LINE_SIZE
/wrkdirs/usr/ports/biology/seqwish/work/seqwish-v0.7.9/deps/atomic_queue/include/atomic_queue/defs.h:40:15: note: '::atomic_queue::CACHE_LINE_SIZE' declared here
constexpr int CACHE_LINE_SIZE = 128; // TODO: Review that this is the correct value.
^
In file included from /wrkdirs/usr/ports/biology/seqwish/work/seqwish-v0.7.9/src/main.cpp:14:
In file included from /wrkdirs/usr/ports/biology/seqwish/work/seqwish-v0.7.9/src/transclosure.hpp:22:
/wrkdirs/usr/ports/biology/seqwish/work/seqwish-v0.7.9/deps/paryfor/paryfor.hpp:487:53: error: use of undeclared identifier 'CACHE_LINE_SIZE'; did you mean '::atomic_queue::CACHE_LINE_SIZE'?
static constexpr auto ELEMENTS_PER_CACHE_LINE = CACHE_LINE_SIZE / sizeof(std::atomic<T>);
^~~~~~~~~~~~~~~
::atomic_queue::CACHE_LINE_SIZE
/wrkdirs/usr/ports/biology/seqwish/work/seqwish-v0.7.9/deps/atomic_queue/include/atomic_queue/defs.h:40:15: note: '::atomic_queue::CACHE_LINE_SIZE' declared here
constexpr int CACHE_LINE_SIZE = 128; // TODO: Review that this is the correct value.
^
In file included from /wrkdirs/usr/ports/biology/seqwish/work/seqwish-v0.7.9/src/main.cpp:14:
In file included from /wrkdirs/usr/ports/biology/seqwish/work/seqwish-v0.7.9/src/transclosure.hpp:22:
/wrkdirs/usr/ports/biology/seqwish/work/seqwish-v0.7.9/deps/paryfor/paryfor.hpp:495:13: error: use of undeclared identifier 'CACHE_LINE_SIZE'; did you mean '::atomic_queue::CACHE_LINE_SIZE'?
alignas(CACHE_LINE_SIZE) unsigned size_;
^~~~~~~~~~~~~~~
::atomic_queue::CACHE_LINE_SIZE
/wrkdirs/usr/ports/biology/seqwish/work/seqwish-v0.7.9/deps/atomic_queue/include/atomic_queue/defs.h:40:15: note: '::atomic_queue::CACHE_LINE_SIZE' declared here
constexpr int CACHE_LINE_SIZE = 128; // TODO: Review that this is the correct value.
^
In file included from /wrkdirs/usr/ports/biology/seqwish/work/seqwish-v0.7.9/src/main.cpp:14:
In file included from /wrkdirs/usr/ports/biology/seqwish/work/seqwish-v0.7.9/src/transclosure.hpp:22:
/wrkdirs/usr/ports/biology/seqwish/work/seqwish-v0.7.9/deps/paryfor/paryfor.hpp:572:13: error: use of undeclared identifier 'CACHE_LINE_SIZE'; did you mean '::atomic_queue::CACHE_LINE_SIZE'?
alignas(CACHE_LINE_SIZE) unsigned size_;
^~~~~~~~~~~~~~~
::atomic_queue::CACHE_LINE_SIZE
/wrkdirs/usr/ports/biology/seqwish/work/seqwish-v0.7.9/deps/atomic_queue/include/atomic_queue/defs.h:40:15: note: '::atomic_queue::CACHE_LINE_SIZE' declared here
constexpr int CACHE_LINE_SIZE = 128; // TODO: Review that this is the correct value.
^
fatal error: too many errors emitted, stopping now [-ferror-limit=]
20 errors generated.
*** [CMakeFiles/seqwish.dir/src/main.cpp.o] Error code 1
make[3]: stopped in /wrkdirs/usr/ports/biology/seqwish/work/.build
--- CMakeFiles/seqwish.dir/src/seqindex.cpp.o ---
In file included from /wrkdirs/usr/ports/biology/seqwish/work/seqwish-v0.7.9/src/seqindex.cpp:1:
In file included from /wrkdirs/usr/ports/biology/seqwish/work/seqwish-v0.7.9/src/seqindex.hpp:11:
In file included from /wrkdirs/usr/ports/biology/seqwish/work/.build/sdsl-lite-prefix/src/sdsl-lite-build/include/sdsl/csa_wt.hpp:24:
In file included from /wrkdirs/usr/ports/biology/seqwish/work/.build/sdsl-lite-prefix/src/sdsl-lite-build/include/sdsl/wavelet_trees.hpp:41:
/wrkdirs/usr/ports/biology/seqwish/work/.build/sdsl-lite-prefix/src/sdsl-lite-build/include/sdsl/construct.hpp:124:79: warning: instantiation of variable 'sdsl::key_text_trait<'\b'>::KEY_TEXT' required here, but no definition is available [-Wundefined-var-template]
const char* KEY_TEXT = key_text_trait<t_index::alphabet_category::WIDTH>::KEY_TEXT;
^
/wrkdirs/usr/ports/biology/seqwish/work/.build/sdsl-lite-prefix/src/sdsl-lite-build/include/sdsl/construct.hpp:90:5: note: in instantiation of function template specialization 'sdsl::construct<sdsl::csa_wt<sdsl::wt_pc<sdsl::huff_shape, sdsl::int_vector<'\x01'>, sdsl::rank_support_v<'\x01', '\x01'>, sdsl::select_support_mcl<'\x01', '\x01'>, sdsl::select_support_mcl<'\x00', '\x01'>>, 32, 64, sdsl::sa_order_sa_sampling<>, sdsl::isa_sampling<>, sdsl::byte_alphabet>>' requested here
construct(idx, file, config, num_bytes, index_tag);
^
/wrkdirs/usr/ports/biology/seqwish/work/.build/sdsl-lite-prefix/src/sdsl-lite-build/include/sdsl/construct.hpp:63:5: note: in instantiation of function template specialization 'sdsl::construct<sdsl::csa_wt<sdsl::wt_pc<sdsl::huff_shape, sdsl::int_vector<'\x01'>, sdsl::rank_support_v<'\x01', '\x01'>, sdsl::select_support_mcl<'\x01', '\x01'>, sdsl::select_support_mcl<'\x00', '\x01'>>, 32, 64, sdsl::sa_order_sa_sampling<>, sdsl::isa_sampling<>, sdsl::byte_alphabet>>' requested here
construct(idx, file, config, num_bytes);
^
/wrkdirs/usr/ports/biology/seqwish/work/seqwish-v0.7.9/src/seqindex.cpp:91:5: note: in instantiation of function template specialization 'sdsl::construct<sdsl::csa_wt<sdsl::wt_pc<sdsl::huff_shape, sdsl::int_vector<'\x01'>, sdsl::rank_support_v<'\x01', '\x01'>, sdsl::select_support_mcl<'\x01', '\x01'>, sdsl::select_support_mcl<'\x00', '\x01'>>, 32, 64, sdsl::sa_order_sa_sampling<>, sdsl::isa_sampling<>, sdsl::byte_alphabet>>' requested here
construct(seq_name_csa, seqnamefile, 1);
^
/wrkdirs/usr/ports/biology/seqwish/work/.build/sdsl-lite-prefix/src/sdsl-lite-build/include/sdsl/config.hpp:51:24: note: forward declaration of template entity is here
static const char* KEY_TEXT;
^
/wrkdirs/usr/ports/biology/seqwish/work/.build/sdsl-lite-prefix/src/sdsl-lite-build/include/sdsl/construct.hpp:124:79: note: add an explicit instantiation declaration to suppress this warning if 'sdsl::key_text_trait<'\b'>::KEY_TEXT' is explicitly instantiated in another translation unit
const char* KEY_TEXT = key_text_trait<t_index::alphabet_category::WIDTH>::KEY_TEXT;
^
/wrkdirs/usr/ports/biology/seqwish/work/.build/sdsl-lite-prefix/src/sdsl-lite-build/include/sdsl/construct.hpp:125:78: warning: instantiation of variable 'sdsl::key_bwt_trait<'\b'>::KEY_BWT' required here, but no definition is available [-Wundefined-var-template]
const char* KEY_BWT = key_bwt_trait<t_index::alphabet_category::WIDTH>::KEY_BWT;
^
/wrkdirs/usr/ports/biology/seqwish/work/.build/sdsl-lite-prefix/src/sdsl-lite-build/include/sdsl/config.hpp:57:24: note: forward declaration of template entity is here
static const char* KEY_BWT;
^
/wrkdirs/usr/ports/biology/seqwish/work/.build/sdsl-lite-prefix/src/sdsl-lite-build/include/sdsl/construct.hpp:125:78: note: add an explicit instantiation declaration to suppress this warning if 'sdsl::key_bwt_trait<'\b'>::KEY_BWT' is explicitly instantiated in another translation unit
const char* KEY_BWT = key_bwt_trait<t_index::alphabet_category::WIDTH>::KEY_BWT;
^
2 warnings generated.
1 error
make[3]: stopped in /wrkdirs/usr/ports/biology/seqwish/work/.build
*** [CMakeFiles/seqwish.dir/all] Error code 2
make[2]: stopped in /wrkdirs/usr/ports/biology/seqwish/work/.build
1 error
make[2]: stopped in /wrkdirs/usr/ports/biology/seqwish/work/.build
*** [all] Error code 2
make[1]: stopped in /wrkdirs/usr/ports/biology/seqwish/work/.build
1 error
make[1]: stopped in /wrkdirs/usr/ports/biology/seqwish/work/.build
===> Compilation failed unexpectedly.
Try to set MAKE_JOBS_UNSAFE=yes and rebuild before reporting the failure to
the maintainer.
*** Error code 1
Stop.
make: stopped in /usr/ports/biology/seqwish