[package - 132amd64-default][science/votca] Failed for votca-2022.1_1 in build
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Date: Mon, 02 Oct 2023 00:16:30 UTC
You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.
Maintainer: yuri@FreeBSD.org
Log URL: https://pkg-status.freebsd.org/beefy16/data/132amd64-default/8b3f09304cc8/logs/votca-2022.1_1.log
Build URL: https://pkg-status.freebsd.org/beefy16/build.html?mastername=132amd64-default&build=8b3f09304cc8
Log:
=>> Building science/votca
build started at Mon Oct 2 00:07:01 UTC 2023
port directory: /usr/ports/science/votca
package name: votca-2022.1_1
building for: FreeBSD 132amd64-default-job-11 13.2-RELEASE-p3 FreeBSD 13.2-RELEASE-p3 amd64
maintained by: yuri@FreeBSD.org
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yuri@FreeBSD.org
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=======================<phase: check-sanity >============================
===> License APACHE20 accepted by the user
===========================================================================
=======================<phase: pkg-depends >============================
===> votca-2022.1_1 depends on file: /usr/local/sbin/pkg - not found
===> Installing existing package /packages/All/pkg-1.20.7.pkg
[132amd64-default-job-11] Installing pkg-1.20.7...
[132amd64-default-job-11] Extracting pkg-1.20.7: .......... done
===> votca-2022.1_1 depends on file: /usr/local/sbin/pkg - found
===> Returning to build of votca-2022.1_1
===========================================================================
=======================<phase: fetch-depends >============================
===========================================================================
=======================<phase: fetch >============================
===> License APACHE20 accepted by the user
===> Fetching all distfiles required by votca-2022.1_1 for building
===========================================================================
=======================<phase: checksum >============================
===> License APACHE20 accepted by the user
===> Fetching all distfiles required by votca-2022.1_1 for building
=> SHA256 Checksum OK for votca-votca-v2022.1_GH0.tar.gz.
===========================================================================
=======================<phase: extract-depends>============================
===========================================================================
=======================<phase: extract >============================
===> License APACHE20 accepted by the user
===> Fetching all distfiles required by votca-2022.1_1 for building
===> Extracting for votca-2022.1_1
=> SHA256 Checksum OK for votca-votca-v2022.1_GH0.tar.gz.
===========================================================================
=======================<phase: patch-depends >============================
===========================================================================
=======================<phase: patch >============================
===> Patching for votca-2022.1_1
===> Applying FreeBSD patches for votca-2022.1_1 from /usr/ports/science/votca/files
===========================================================================
=======================<phase: build-depends >============================
===> votca-2022.1_1 depends on executable: bash - not found
===> Installing existing package /packages/All/bash-5.2.15.pkg
[132amd64-default-job-11] Installing bash-5.2.15...
[132amd64-default-job-11] `-- Installing gettext-runtime-0.22_1...
[132amd64-default-job-11] | `-- Installing indexinfo-0.3.1...
[132amd64-default-job-11] | `-- Extracting indexinfo-0.3.1: .... done
[132amd64-default-job-11] `-- Extracting gettext-runtime-0.22_1: .......... done
[132amd64-default-job-11] `-- Installing readline-8.2.1...
[132amd64-default-job-11] `-- Extracting readline-8.2.1: .......... done
[132amd64-default-job-11] Extracting bash-5.2.15: .......... done
===> votca-2022.1_1 depends on executable: bash - found
<snip>
if (boost::filesystem::extension(filepath).size() == 0) {
^
/usr/local/include/boost/filesystem/convenience.hpp:28:1: note: 'extension' has been explicitly marked deprecated here
BOOST_FILESYSTEM_DETAIL_DEPRECATED("Use path::extension() instead")
^
/usr/local/include/boost/filesystem/config.hpp:73:49: note: expanded from macro 'BOOST_FILESYSTEM_DETAIL_DEPRECATED'
#define BOOST_FILESYSTEM_DETAIL_DEPRECATED(msg) BOOST_DEPRECATED(msg)
^
/usr/local/include/boost/config/compiler/clang.hpp:358:46: note: expanded from macro 'BOOST_DEPRECATED'
#define BOOST_DEPRECATED(msg) __attribute__((deprecated(msg)))
^
/wrkdirs/usr/ports/science/votca/work/votca-2022.1/csg/src/libcsg/modules/io/dlpolytrajectoryreader.cc:56:33: warning: 'extension' is deprecated: Use path::extension() instead [-Wdeprecated-declarations]
} else if (boost::filesystem::extension(filepath) == ".dlpc") {
^
/usr/local/include/boost/filesystem/convenience.hpp:28:1: note: 'extension' has been explicitly marked deprecated here
BOOST_FILESYSTEM_DETAIL_DEPRECATED("Use path::extension() instead")
^
/usr/local/include/boost/filesystem/config.hpp:73:49: note: expanded from macro 'BOOST_FILESYSTEM_DETAIL_DEPRECATED'
#define BOOST_FILESYSTEM_DETAIL_DEPRECATED(msg) BOOST_DEPRECATED(msg)
^
/usr/local/include/boost/config/compiler/clang.hpp:358:46: note: expanded from macro 'BOOST_DEPRECATED'
#define BOOST_DEPRECATED(msg) __attribute__((deprecated(msg)))
^
/wrkdirs/usr/ports/science/votca/work/votca-2022.1/csg/src/libcsg/modules/io/dlpolytrajectoryreader.cc:61:33: warning: 'extension' is deprecated: Use path::extension() instead [-Wdeprecated-declarations]
} else if (boost::filesystem::extension(filepath) == ".dlph") {
^
/usr/local/include/boost/filesystem/convenience.hpp:28:1: note: 'extension' has been explicitly marked deprecated here
BOOST_FILESYSTEM_DETAIL_DEPRECATED("Use path::extension() instead")
^
/usr/local/include/boost/filesystem/config.hpp:73:49: note: expanded from macro 'BOOST_FILESYSTEM_DETAIL_DEPRECATED'
#define BOOST_FILESYSTEM_DETAIL_DEPRECATED(msg) BOOST_DEPRECATED(msg)
^
/usr/local/include/boost/config/compiler/clang.hpp:358:46: note: expanded from macro 'BOOST_DEPRECATED'
#define BOOST_DEPRECATED(msg) __attribute__((deprecated(msg)))
^
/wrkdirs/usr/ports/science/votca/work/votca-2022.1/csg/src/libcsg/modules/io/dlpolytrajectoryreader.cc:70:26: warning: 'basename' is deprecated: Use path::stem() instead [-Wdeprecated-declarations]
if (boost::filesystem::basename(filepath).size() == 0) {
^
/usr/local/include/boost/filesystem/convenience.hpp:34:1: note: 'basename' has been explicitly marked deprecated here
BOOST_FILESYSTEM_DETAIL_DEPRECATED("Use path::stem() instead")
^
/usr/local/include/boost/filesystem/config.hpp:73:49: note: expanded from macro 'BOOST_FILESYSTEM_DETAIL_DEPRECATED'
#define BOOST_FILESYSTEM_DETAIL_DEPRECATED(msg) BOOST_DEPRECATED(msg)
^
/usr/local/include/boost/config/compiler/clang.hpp:358:46: note: expanded from macro 'BOOST_DEPRECATED'
#define BOOST_DEPRECATED(msg) __attribute__((deprecated(msg)))
^
4 warnings generated.
[ 25% 85/331] /usr/bin/c++ -DGMX_DOUBLE=1 -DTMPI_USE_VISIBILITY -Dvotca_csg_EXPORTS -I/wrkdirs/usr/ports/science/votca/work/.build/csg/src/libcsg -I/wrkdirs/usr/ports/science/votca/work/votca-2022.1/csg/include -I/wrkdirs/usr/ports/science/votca/work/votca-2022.1/tools/include -I/wrkdirs/usr/ports/science/votca/work/.build/tools/include -I/wrkdirs/usr/ports/science/votca/work/.build/tools/include/votca/tools -isystem /usr/local/include -isystem /usr/local/include/eigen3 -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wno-sign-conversion -march=native -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -DNDEBUG -std=c++17 -fPIC -fopenmp=libomp -pthread -MD -MT csg/src/libcsg/CMakeFiles/votca_csg.dir/modules/io/dlpolytopologyreader.cc.o -MF csg/src/libcsg/CMakeFiles/votca_csg.dir/modules/io/dlpolytopologyreader.cc.o.d -o csg/src/libcsg/CMakeFiles/votca_csg.dir/modules/io/dlpolytopologyreader.cc.o -c /wrkdirs/usr/por
ts/science/votca/work/votca-2022.1/csg/src/libcsg/modules/io/dlpolytopologyreader.cc
/wrkdirs/usr/ports/science/votca/work/votca-2022.1/csg/src/libcsg/modules/io/dlpolytopologyreader.cc:159:26: warning: 'basename' is deprecated: Use path::stem() instead [-Wdeprecated-declarations]
if (boost::filesystem::basename(filepath).size() == 0) {
^
/usr/local/include/boost/filesystem/convenience.hpp:34:1: note: 'basename' has been explicitly marked deprecated here
BOOST_FILESYSTEM_DETAIL_DEPRECATED("Use path::stem() instead")
^
/usr/local/include/boost/filesystem/config.hpp:73:49: note: expanded from macro 'BOOST_FILESYSTEM_DETAIL_DEPRECATED'
#define BOOST_FILESYSTEM_DETAIL_DEPRECATED(msg) BOOST_DEPRECATED(msg)
^
/usr/local/include/boost/config/compiler/clang.hpp:358:46: note: expanded from macro 'BOOST_DEPRECATED'
#define BOOST_DEPRECATED(msg) __attribute__((deprecated(msg)))
^
1 warning generated.
[ 25% 86/331] /usr/bin/c++ -DGMX_DOUBLE=1 -DTMPI_USE_VISIBILITY -Dvotca_csg_EXPORTS -I/wrkdirs/usr/ports/science/votca/work/.build/csg/src/libcsg -I/wrkdirs/usr/ports/science/votca/work/votca-2022.1/csg/include -I/wrkdirs/usr/ports/science/votca/work/votca-2022.1/tools/include -I/wrkdirs/usr/ports/science/votca/work/.build/tools/include -I/wrkdirs/usr/ports/science/votca/work/.build/tools/include/votca/tools -isystem /usr/local/include -isystem /usr/local/include/eigen3 -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wno-sign-conversion -march=native -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -DNDEBUG -std=c++17 -fPIC -fopenmp=libomp -pthread -MD -MT csg/src/libcsg/CMakeFiles/votca_csg.dir/modules/io/growriter.cc.o -MF csg/src/libcsg/CMakeFiles/votca_csg.dir/modules/io/growriter.cc.o.d -o csg/src/libcsg/CMakeFiles/votca_csg.dir/modules/io/growriter.cc.o -c /wrkdirs/usr/ports/science/votca/work/votca-2022.
1/csg/src/libcsg/modules/io/growriter.cc
[ 25% 87/331] /usr/bin/c++ -DGMX_DOUBLE=1 -DTMPI_USE_VISIBILITY -Dvotca_csg_EXPORTS -I/wrkdirs/usr/ports/science/votca/work/.build/csg/src/libcsg -I/wrkdirs/usr/ports/science/votca/work/votca-2022.1/csg/include -I/wrkdirs/usr/ports/science/votca/work/votca-2022.1/tools/include -I/wrkdirs/usr/ports/science/votca/work/.build/tools/include -I/wrkdirs/usr/ports/science/votca/work/.build/tools/include/votca/tools -isystem /usr/local/include -isystem /usr/local/include/eigen3 -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wno-sign-conversion -march=native -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -DNDEBUG -std=c++17 -fPIC -fopenmp=libomp -pthread -MD -MT csg/src/libcsg/CMakeFiles/votca_csg.dir/modules/io/groreader.cc.o -MF csg/src/libcsg/CMakeFiles/votca_csg.dir/modules/io/groreader.cc.o.d -o csg/src/libcsg/CMakeFiles/votca_csg.dir/modules/io/groreader.cc.o -c /wrkdirs/usr/ports/science/votca/work/votca-2022.
1/csg/src/libcsg/modules/io/groreader.cc
[ 25% 88/331] /usr/bin/c++ -DGMX_DOUBLE=1 -DTMPI_USE_VISIBILITY -Dvotca_csg_EXPORTS -I/wrkdirs/usr/ports/science/votca/work/.build/csg/src/libcsg -I/wrkdirs/usr/ports/science/votca/work/votca-2022.1/csg/include -I/wrkdirs/usr/ports/science/votca/work/votca-2022.1/tools/include -I/wrkdirs/usr/ports/science/votca/work/.build/tools/include -I/wrkdirs/usr/ports/science/votca/work/.build/tools/include/votca/tools -isystem /usr/local/include -isystem /usr/local/include/eigen3 -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wno-sign-conversion -march=native -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -DNDEBUG -std=c++17 -fPIC -fopenmp=libomp -pthread -MD -MT csg/src/libcsg/CMakeFiles/votca_csg.dir/modules/io/lammpsdatareader.cc.o -MF csg/src/libcsg/CMakeFiles/votca_csg.dir/modules/io/lammpsdatareader.cc.o.d -o csg/src/libcsg/CMakeFiles/votca_csg.dir/modules/io/lammpsdatareader.cc.o -c /wrkdirs/usr/ports/science/v
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ib/libomp.so /usr/local/lib/libfftw3.so -lpthread -Wl,-rpath-link,/usr/local/lib && :
[ 30% 102/331] /usr/local/bin/cmake -E cmake_symlink_library csg/src/libcsg/libvotca_csg.so.2022 csg/src/libcsg/libvotca_csg.so.2022 csg/src/libcsg/libvotca_csg.so && :
[ 30% 103/331] : && /usr/bin/c++ -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wno-sign-conversion -march=native -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -DNDEBUG -fstack-protector-strong csg/src/tools/CMakeFiles/csg_map.dir/csg_map.cc.o -o csg/src/tools/csg_map -Wl,-rpath,/wrkdirs/usr/ports/science/votca/work/.build/csg/src/libcsg:/wrkdirs/usr/ports/science/votca/work/.build/tools/src/libtools:/usr/local/lib: csg/src/libcsg/libvotca_csg.so.2022 tools/src/libtools/libvotca_tools.so.2022 /usr/local/lib/libboost_program_options.so /usr/local/lib/libfftw3.so /usr/lib/libomp.so -Wl,-rpath-link,/usr/local/lib && :
[ 30% 104/331] /usr/bin/c++ -I/wrkdirs/usr/ports/science/votca/work/votca-2022.1/csg/include -I/wrkdirs/usr/ports/science/votca/work/votca-2022.1/tools/include -I/wrkdirs/usr/ports/science/votca/work/.build/tools/include -I/wrkdirs/usr/ports/science/votca/work/.build/tools/include/votca/tools -isystem /usr/local/include -isystem /usr/local/include/eigen3 -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wno-sign-conversion -march=native -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -DNDEBUG -std=c++17 -fopenmp=libomp -MD -MT csg/src/tools/CMakeFiles/csg_dump.dir/csg_dump.cc.o -MF csg/src/tools/CMakeFiles/csg_dump.dir/csg_dump.cc.o.d -o csg/src/tools/CMakeFiles/csg_dump.dir/csg_dump.cc.o -c /wrkdirs/usr/ports/science/votca/work/votca-2022.1/csg/src/tools/csg_dump.cc
[ 31% 105/331] : && /usr/bin/c++ -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wno-sign-conversion -march=native -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -DNDEBUG -fstack-protector-strong csg/src/tools/CMakeFiles/csg_dump.dir/csg_dump.cc.o -o csg/src/tools/csg_dump -Wl,-rpath,/wrkdirs/usr/ports/science/votca/work/.build/csg/src/libcsg:/wrkdirs/usr/ports/science/votca/work/.build/tools/src/libtools:/usr/local/lib: csg/src/libcsg/libvotca_csg.so.2022 tools/src/libtools/libvotca_tools.so.2022 /usr/local/lib/libboost_program_options.so /usr/local/lib/libfftw3.so /usr/lib/libomp.so -Wl,-rpath-link,/usr/local/lib && :
[ 31% 106/331] /usr/bin/c++ -I/wrkdirs/usr/ports/science/votca/work/votca-2022.1/csg/include -I/wrkdirs/usr/ports/science/votca/work/votca-2022.1/tools/include -I/wrkdirs/usr/ports/science/votca/work/.build/tools/include -I/wrkdirs/usr/ports/science/votca/work/.build/tools/include/votca/tools -isystem /usr/local/include -isystem /usr/local/include/eigen3 -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wno-sign-conversion -march=native -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -DNDEBUG -std=c++17 -fopenmp=libomp -MD -MT csg/src/tools/CMakeFiles/csg_reupdate.dir/csg_reupdate.cc.o -MF csg/src/tools/CMakeFiles/csg_reupdate.dir/csg_reupdate.cc.o.d -o csg/src/tools/CMakeFiles/csg_reupdate.dir/csg_reupdate.cc.o -c /wrkdirs/usr/ports/science/votca/work/votca-2022.1/csg/src/tools/csg_reupdate.cc
[ 31% 107/331] : && /usr/bin/c++ -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wno-sign-conversion -march=native -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -DNDEBUG -fstack-protector-strong csg/src/tools/CMakeFiles/csg_reupdate.dir/csg_reupdate.cc.o -o csg/src/tools/csg_reupdate -Wl,-rpath,/wrkdirs/usr/ports/science/votca/work/.build/csg/src/libcsg:/wrkdirs/usr/ports/science/votca/work/.build/tools/src/libtools:/usr/local/lib: csg/src/libcsg/libvotca_csg.so.2022 tools/src/libtools/libvotca_tools.so.2022 /usr/local/lib/libboost_program_options.so /usr/local/lib/libfftw3.so /usr/lib/libomp.so -Wl,-rpath-link,/usr/local/lib && :
[ 32% 108/331] /usr/bin/c++ -I/wrkdirs/usr/ports/science/votca/work/votca-2022.1/csg/include -I/wrkdirs/usr/ports/science/votca/work/votca-2022.1/tools/include -I/wrkdirs/usr/ports/science/votca/work/.build/tools/include -I/wrkdirs/usr/ports/science/votca/work/.build/tools/include/votca/tools -isystem /usr/local/include -isystem /usr/local/include/eigen3 -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wno-sign-conversion -march=native -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -DNDEBUG -std=c++17 -fopenmp=libomp -MD -MT csg/src/tools/CMakeFiles/csg_property.dir/csg_property.cc.o -MF csg/src/tools/CMakeFiles/csg_property.dir/csg_property.cc.o.d -o csg/src/tools/CMakeFiles/csg_property.dir/csg_property.cc.o -c /wrkdirs/usr/ports/science/votca/work/votca-2022.1/csg/src/tools/csg_property.cc
[ 32% 109/331] : && /usr/bin/c++ -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wno-sign-conversion -march=native -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -DNDEBUG -fstack-protector-strong csg/src/tools/CMakeFiles/csg_property.dir/csg_property.cc.o -o csg/src/tools/csg_property -Wl,-rpath,/wrkdirs/usr/ports/science/votca/work/.build/csg/src/libcsg:/wrkdirs/usr/ports/science/votca/work/.build/tools/src/libtools:/usr/local/lib: csg/src/libcsg/libvotca_csg.so.2022 tools/src/libtools/libvotca_tools.so.2022 /usr/local/lib/libboost_program_options.so /usr/local/lib/libfftw3.so /usr/lib/libomp.so -Wl,-rpath-link,/usr/local/lib && :
[ 32% 110/331] /usr/bin/c++ -I/wrkdirs/usr/ports/science/votca/work/votca-2022.1/csg/include -I/wrkdirs/usr/ports/science/votca/work/votca-2022.1/tools/include -I/wrkdirs/usr/ports/science/votca/work/.build/tools/include -I/wrkdirs/usr/ports/science/votca/work/.build/tools/include/votca/tools -isystem /usr/local/include -isystem /usr/local/include/eigen3 -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wno-sign-conversion -march=native -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -DNDEBUG -std=c++17 -fopenmp=libomp -MD -MT csg/src/tools/CMakeFiles/csg_resample.dir/csg_resample.cc.o -MF csg/src/tools/CMakeFiles/csg_resample.dir/csg_resample.cc.o.d -o csg/src/tools/CMakeFiles/csg_resample.dir/csg_resample.cc.o -c /wrkdirs/usr/ports/science/votca/work/votca-2022.1/csg/src/tools/csg_resample.cc
[ 32% 111/331] : && /usr/bin/c++ -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wno-sign-conversion -march=native -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -DNDEBUG -fstack-protector-strong csg/src/tools/CMakeFiles/csg_resample.dir/csg_resample.cc.o -o csg/src/tools/csg_resample -Wl,-rpath,/wrkdirs/usr/ports/science/votca/work/.build/csg/src/libcsg:/wrkdirs/usr/ports/science/votca/work/.build/tools/src/libtools:/usr/local/lib: csg/src/libcsg/libvotca_csg.so.2022 tools/src/libtools/libvotca_tools.so.2022 /usr/local/lib/libboost_program_options.so /usr/local/lib/libfftw3.so /usr/lib/libomp.so -Wl,-rpath-link,/usr/local/lib && :
[ 33% 112/331] /usr/bin/c++ -I/wrkdirs/usr/ports/science/votca/work/votca-2022.1/csg/include -I/wrkdirs/usr/ports/science/votca/work/votca-2022.1/tools/include -I/wrkdirs/usr/ports/science/votca/work/.build/tools/include -I/wrkdirs/usr/ports/science/votca/work/.build/tools/include/votca/tools -isystem /usr/local/include -isystem /usr/local/include/eigen3 -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wno-sign-conversion -march=native -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -DNDEBUG -std=c++17 -fopenmp=libomp -MD -MT csg/src/tools/CMakeFiles/csg_stat.dir/csg_stat.cc.o -MF csg/src/tools/CMakeFiles/csg_stat.dir/csg_stat.cc.o.d -o csg/src/tools/CMakeFiles/csg_stat.dir/csg_stat.cc.o -c /wrkdirs/usr/ports/science/votca/work/votca-2022.1/csg/src/tools/csg_stat.cc
[ 33% 113/331] /usr/bin/c++ -I/wrkdirs/usr/ports/science/votca/work/votca-2022.1/csg/include -I/wrkdirs/usr/ports/science/votca/work/votca-2022.1/tools/include -I/wrkdirs/usr/ports/science/votca/work/.build/tools/include -I/wrkdirs/usr/ports/science/votca/work/.build/tools/include/votca/tools -isystem /usr/local/include -isystem /usr/local/include/eigen3 -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wno-sign-conversion -march=native -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -DNDEBUG -std=c++17 -fopenmp=libomp -MD -MT csg/src/tools/CMakeFiles/csg_stat.dir/csg_stat_imc.cc.o -MF csg/src/tools/CMakeFiles/csg_stat.dir/csg_stat_imc.cc.o.d -o csg/src/tools/CMakeFiles/csg_stat.dir/csg_stat_imc.cc.o -c /wrkdirs/usr/ports/science/votca/work/votca-2022.1/csg/src/tools/csg_stat_imc.cc
[ 33% 114/331] : && /usr/bin/c++ -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wno-sign-conversion -march=native -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -DNDEBUG -fstack-protector-strong csg/src/tools/CMakeFiles/csg_stat.dir/csg_stat.cc.o csg/src/tools/CMakeFiles/csg_stat.dir/csg_stat_imc.cc.o -o csg/src/tools/csg_stat -Wl,-rpath,/wrkdirs/usr/ports/science/votca/work/.build/csg/src/libcsg:/wrkdirs/usr/ports/science/votca/work/.build/tools/src/libtools:/usr/local/lib: csg/src/libcsg/libvotca_csg.so.2022 tools/src/libtools/libvotca_tools.so.2022 /usr/local/lib/libboost_program_options.so /usr/local/lib/libfftw3.so /usr/lib/libomp.so -Wl,-rpath-link,/usr/local/lib && :
[ 34% 115/331] /usr/bin/c++ -I/wrkdirs/usr/ports/science/votca/work/votca-2022.1/csg/include -I/wrkdirs/usr/ports/science/votca/work/votca-2022.1/tools/include -I/wrkdirs/usr/ports/science/votca/work/.build/tools/include -I/wrkdirs/usr/ports/science/votca/work/.build/tools/include/votca/tools -isystem /usr/local/include -isystem /usr/local/include/eigen3 -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wno-sign-conversion -march=native -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -DNDEBUG -std=c++17 -fopenmp=libomp -MD -MT csg/src/tools/CMakeFiles/csg_gmxtopol.dir/csg_gmxtopol.cc.o -MF csg/src/tools/CMakeFiles/csg_gmxtopol.dir/csg_gmxtopol.cc.o.d -o csg/src/tools/CMakeFiles/csg_gmxtopol.dir/csg_gmxtopol.cc.o -c /wrkdirs/usr/ports/science/votca/work/votca-2022.1/csg/src/tools/csg_gmxtopol.cc
[ 34% 116/331] : && /usr/bin/c++ -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wno-sign-conversion -march=native -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -DNDEBUG -fstack-protector-strong csg/src/tools/CMakeFiles/csg_gmxtopol.dir/csg_gmxtopol.cc.o -o csg/src/tools/csg_gmxtopol -Wl,-rpath,/wrkdirs/usr/ports/science/votca/work/.build/csg/src/libcsg:/wrkdirs/usr/ports/science/votca/work/.build/tools/src/libtools:/usr/local/lib: csg/src/libcsg/libvotca_csg.so.2022 tools/src/libtools/libvotca_tools.so.2022 /usr/local/lib/libboost_program_options.so /usr/local/lib/libfftw3.so /usr/lib/libomp.so -Wl,-rpath-link,/usr/local/lib && :
[ 34% 117/331] /usr/bin/c++ -I/wrkdirs/usr/ports/science/votca/work/votca-2022.1/csg/include -I/wrkdirs/usr/ports/science/votca/work/votca-2022.1/tools/include -I/wrkdirs/usr/ports/science/votca/work/.build/tools/include -I/wrkdirs/usr/ports/science/votca/work/.build/tools/include/votca/tools -isystem /usr/local/include -isystem /usr/local/include/eigen3 -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wno-sign-conversion -march=native -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -DNDEBUG -std=c++17 -fopenmp=libomp -MD -MT csg/src/tools/CMakeFiles/csg_dlptopol.dir/csg_dlptopol.cc.o -MF csg/src/tools/CMakeFiles/csg_dlptopol.dir/csg_dlptopol.cc.o.d -o csg/src/tools/CMakeFiles/csg_dlptopol.dir/csg_dlptopol.cc.o -c /wrkdirs/usr/ports/science/votca/work/votca-2022.1/csg/src/tools/csg_dlptopol.cc
[ 35% 118/331] : && /usr/bin/c++ -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wno-sign-conversion -march=native -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -DNDEBUG -fstack-protector-strong csg/src/tools/CMakeFiles/csg_dlptopol.dir/csg_dlptopol.cc.o -o csg/src/tools/csg_dlptopol -Wl,-rpath,/wrkdirs/usr/ports/science/votca/work/.build/csg/src/libcsg:/wrkdirs/usr/ports/science/votca/work/.build/tools/src/libtools:/usr/local/lib: csg/src/libcsg/libvotca_csg.so.2022 tools/src/libtools/libvotca_tools.so.2022 /usr/local/lib/libboost_program_options.so /usr/local/lib/libfftw3.so /usr/lib/libomp.so -Wl,-rpath-link,/usr/local/lib && :
[ 35% 119/331] /usr/bin/c++ -I/wrkdirs/usr/ports/science/votca/work/votca-2022.1/csg/include -I/wrkdirs/usr/ports/science/votca/work/votca-2022.1/tools/include -I/wrkdirs/usr/ports/science/votca/work/.build/tools/include -I/wrkdirs/usr/ports/science/votca/work/.build/tools/include/votca/tools -isystem /usr/local/include -isystem /usr/local/include/eigen3 -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wno-sign-conversion -march=native -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -DNDEBUG -std=c++17 -fopenmp=libomp -MD -MT csg/src/tools/CMakeFiles/csg_fmatch.dir/csg_fmatch.cc.o -MF csg/src/tools/CMakeFiles/csg_fmatch.dir/csg_fmatch.cc.o.d -o csg/src/tools/CMakeFiles/csg_fmatch.dir/csg_fmatch.cc.o -c /wrkdirs/usr/ports/science/votca/work/votca-2022.1/csg/src/tools/csg_fmatch.cc
[ 35% 120/331] /usr/bin/c++ -I/wrkdirs/usr/ports/science/votca/work/votca-2022.1/csg/include -I/wrkdirs/usr/ports/science/votca/work/votca-2022.1/tools/include -I/wrkdirs/usr/ports/science/votca/work/.build/tools/include -I/wrkdirs/usr/ports/science/votca/work/.build/tools/include/votca/tools -isystem /usr/local/include -isystem /usr/local/include/eigen3 -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wno-sign-conversion -march=native -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -DNDEBUG -std=c++17 -fopenmp=libomp -MD -MT csg/src/tools/CMakeFiles/csg_density.dir/csg_density.cc.o -MF csg/src/tools/CMakeFiles/csg_density.dir/csg_density.cc.o.d -o csg/src/tools/CMakeFiles/csg_density.dir/csg_density.cc.o -c /wrkdirs/usr/ports/science/votca/work/votca-2022.1/csg/src/tools/csg_density.cc
[ 35% 121/331] : && /usr/bin/c++ -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wno-sign-conversion -march=native -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -DNDEBUG -fstack-protector-strong csg/src/tools/CMakeFiles/csg_fmatch.dir/csg_fmatch.cc.o -o csg/src/tools/csg_fmatch -Wl,-rpath,/wrkdirs/usr/ports/science/votca/work/.build/csg/src/libcsg:/wrkdirs/usr/ports/science/votca/work/.build/tools/src/libtools:/usr/local/lib: csg/src/libcsg/libvotca_csg.so.2022 tools/src/libtools/libvotca_tools.so.2022 /usr/local/lib/libboost_program_options.so /usr/local/lib/libfftw3.so /usr/lib/libomp.so -Wl,-rpath-link,/usr/local/lib && :
[ 36% 122/331] : && /usr/bin/c++ -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wno-sign-conversion -march=native -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -DNDEBUG -fstack-protector-strong csg/src/tools/CMakeFiles/csg_density.dir/csg_density.cc.o -o csg/src/tools/csg_density -Wl,-rpath,/wrkdirs/usr/ports/science/votca/work/.build/csg/src/libcsg:/wrkdirs/usr/ports/science/votca/work/.build/tools/src/libtools:/usr/local/lib: csg/src/libcsg/libvotca_csg.so.2022 tools/src/libtools/libvotca_tools.so.2022 /usr/local/lib/libboost_program_options.so /usr/local/lib/libfftw3.so /usr/lib/libomp.so -Wl,-rpath-link,/usr/local/lib && :
[ 36% 123/331] cd /wrkdirs/usr/ports/science/votca/work/.build/csg/src/tools && /wrkdirs/usr/ports/science/votca/work/.build/tools/scripts/votca_help2doc --name /wrkdirs/usr/ports/science/votca/work/.build/csg/src/tools/csg_reupdate --format groff --out csg_reupdate.man
[ 36% 124/331] cd /wrkdirs/usr/ports/science/votca/work/.build/csg/src/tools && /wrkdirs/usr/ports/science/votca/work/.build/tools/scripts/votca_help2doc --name /wrkdirs/usr/ports/science/votca/work/.build/csg/src/tools/csg_map --format groff --out csg_map.man
[ 37% 125/331] cd /wrkdirs/usr/ports/science/votca/work/.build/csg/src/tools && /wrkdirs/usr/ports/science/votca/work/.build/tools/scripts/votca_help2doc --name /wrkdirs/usr/ports/science/votca/work/.build/csg/src/tools/csg_dump --format groff --out csg_dump.man
[ 37% 126/331] cd /wrkdirs/usr/ports/science/votca/work/.build/csg/src/tools && /wrkdirs/usr/ports/science/votca/work/.build/tools/scripts/votca_help2doc --name /wrkdirs/usr/ports/science/votca/work/.build/csg/src/tools/csg_property --format groff --out csg_property.man
[ 37% 127/331] cd /wrkdirs/usr/ports/science/votca/work/.build/csg/src/tools && /wrkdirs/usr/ports/science/votca/work/.build/tools/scripts/votca_help2doc --name /wrkdirs/usr/ports/science/votca/work/.build/csg/src/tools/csg_resample --format groff --out csg_resample.man
[ 38% 128/331] cd /wrkdirs/usr/ports/science/votca/work/.build/csg/src/tools && /wrkdirs/usr/ports/science/votca/work/.build/tools/scripts/votca_help2doc --name /wrkdirs/usr/ports/science/votca/work/.build/csg/src/tools/csg_stat --format groff --out csg_stat.man
[ 38% 129/331] cd /wrkdirs/usr/ports/science/votca/work/.build/csg/src/tools && /wrkdirs/usr/ports/science/votca/work/.build/tools/scripts/votca_help2doc --name /wrkdirs/usr/ports/science/votca/work/.build/csg/src/tools/csg_fmatch --format groff --out csg_fmatch.man
[ 38% 130/331] cd /wrkdirs/usr/ports/science/votca/work/.build/csg/src/tools && /wrkdirs/usr/ports/science/votca/work/.build/tools/scripts/votca_help2doc --name /wrkdirs/usr/ports/science/votca/work/.build/csg/src/tools/csg_gmxtopol --format groff --out csg_gmxtopol.man
[ 38% 131/331] cd /wrkdirs/usr/ports/science/votca/work/.build/csg/src/tools && /wrkdirs/usr/ports/science/votca/work/.build/tools/scripts/votca_help2doc --name /wrkdirs/usr/ports/science/votca/work/.build/csg/src/tools/csg_dlptopol --format groff --out csg_dlptopol.man
[ 39% 132/331] cd /wrkdirs/usr/ports/science/votca/work/.build/csg/src/tools && /wrkdirs/usr/ports/science/votca/work/.build/tools/scripts/votca_help2doc --name /wrkdirs/usr/ports/science/votca/work/.build/csg/src/tools/csg_density --format groff --out csg_density.man
[ 39% 133/331] /usr/bin/c++ -I/wrkdirs/usr/ports/science/votca/work/votca-2022.1/csg/include -I/wrkdirs/usr/ports/science/votca/work/votca-2022.1/tools/include -I/wrkdirs/usr/ports/science/votca/work/.build/tools/include -I/wrkdirs/usr/ports/science/votca/work/.build/tools/include/votca/tools -isystem /usr/local/include -isystem /usr/local/include/eigen3 -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wno-sign-conversion -march=native -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -DNDEBUG -std=c++17 -fopenmp=libomp -MD -MT csg/src/csg_boltzmann/CMakeFiles/votca_csg_boltzmann.dir/bondedstatistics.cc.o -MF csg/src/csg_boltzmann/CMakeFiles/votca_csg_boltzmann.dir/bondedstatistics.cc.o.d -o csg/src/csg_boltzmann/CMakeFiles/votca_csg_boltzmann.dir/bondedstatistics.cc.o -c /wrkdirs/usr/ports/science/votca/work/votca-2022.1/csg/src/csg_boltzmann/bondedstatistics.cc
[ 39% 134/331] /usr/bin/c++ -I/wrkdirs/usr/ports/science/votca/work/votca-2022.1/csg/include -I/wrkdirs/usr/ports/science/votca/work/votca-2022.1/tools/include -I/wrkdirs/usr/ports/science/votca/work/.build/tools/include -I/wrkdirs/usr/ports/science/votca/work/.build/tools/include/votca/tools -isystem /usr/local/include -isystem /usr/local/include/eigen3 -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wno-sign-conversion -march=native -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -DNDEBUG -std=c++17 -fopenmp=libomp -MD -MT csg/src/csg_boltzmann/CMakeFiles/votca_csg_boltzmann.dir/stdanalysis.cc.o -MF csg/src/csg_boltzmann/CMakeFiles/votca_csg_boltzmann.dir/stdanalysis.cc.o.d -o csg/src/csg_boltzmann/CMakeFiles/votca_csg_boltzmann.dir/stdanalysis.cc.o -c /wrkdirs/usr/ports/science/votca/work/votca-2022.1/csg/src/csg_boltzmann/stdanalysis.cc
[ 40% 135/331] /usr/bin/c++ -I/wrkdirs/usr/ports/science/votca/work/votca-2022.1/csg/include -I/wrkdirs/usr/ports/science/votca/work/votca-2022.1/tools/include -I/wrkdirs/usr/ports/science/votca/work/.build/tools/include -I/wrkdirs/usr/ports/science/votca/work/.build/tools/include/votca/tools -isystem /usr/local/include -isystem /usr/local/include/eigen3 -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wno-sign-conversion -march=native -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -DNDEBUG -std=c++17 -fopenmp=libomp -MD -MT csg/src/csg_boltzmann/CMakeFiles/votca_csg_boltzmann.dir/tabulatedpotential.cc.o -MF csg/src/csg_boltzmann/CMakeFiles/votca_csg_boltzmann.dir/tabulatedpotential.cc.o.d -o csg/src/csg_boltzmann/CMakeFiles/votca_csg_boltzmann.dir/tabulatedpotential.cc.o -c /wrkdirs/usr/ports/science/votca/work/votca-2022.1/csg/src/csg_boltzmann/tabulatedpotential.cc
[ 40% 136/331] /usr/bin/c++ -I/wrkdirs/usr/ports/science/votca/work/votca-2022.1/csg/include -I/wrkdirs/usr/ports/science/votca/work/votca-2022.1/tools/include -I/wrkdirs/usr/ports/science/votca/work/.build/tools/include -I/wrkdirs/usr/ports/science/votca/work/.build/tools/include/votca/tools -isystem /usr/local/include -isystem /usr/local/include/eigen3 -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wno-sign-conversion -march=native -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -DNDEBUG -std=c++17 -fopenmp=libomp -MD -MT csg/src/csg_boltzmann/CMakeFiles/csg_boltzmann.dir/main.cc.o -MF csg/src/csg_boltzmann/CMakeFiles/csg_boltzmann.dir/main.cc.o.d -o csg/src/csg_boltzmann/CMakeFiles/csg_boltzmann.dir/main.cc.o -c /wrkdirs/usr/ports/science/votca/work/votca-2022.1/csg/src/csg_boltzmann/main.cc
[ 40% 137/331] : && /usr/bin/c++ -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wno-sign-conversion -march=native -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -DNDEBUG -fstack-protector-strong csg/src/csg_boltzmann/CMakeFiles/votca_csg_boltzmann.dir/bondedstatistics.cc.o csg/src/csg_boltzmann/CMakeFiles/votca_csg_boltzmann.dir/stdanalysis.cc.o csg/src/csg_boltzmann/CMakeFiles/votca_csg_boltzmann.dir/tabulatedpotential.cc.o csg/src/csg_boltzmann/CMakeFiles/csg_boltzmann.dir/main.cc.o -o csg/src/csg_boltzmann/csg_boltzmann -Wl,-rpath,/wrkdirs/usr/ports/science/votca/work/.build/csg/src/libcsg:/wrkdirs/usr/ports/science/votca/work/.build/tools/src/libtools:/usr/local/lib: csg/src/libcsg/libvotca_csg.so.2022 tools/src/libtools/libvotca_tools.so.2022 /usr/local/lib/libboost_program_options.so /usr/local/lib/libfftw3.so /usr/lib/libomp.so -Wl,-rpath-link,/usr/local/lib && :
[ 41% 138/331] cd /wrkdirs/usr/ports/science/votca/work/.build/csg/src/csg_boltzmann && /wrkdirs/usr/ports/science/votca/work/.build/tools/scripts/votca_help2doc --name /wrkdirs/usr/ports/science/votca/work/.build/csg/src/csg_boltzmann/csg_boltzmann --format groff --out csg_boltzmann.man
[ 41% 139/331] /usr/bin/c++ -I/wrkdirs/usr/ports/science/votca/work/votca-2022.1/csg/include -I/wrkdirs/usr/ports/science/votca/work/votca-2022.1/tools/include -I/wrkdirs/usr/ports/science/votca/work/.build/tools/include -I/wrkdirs/usr/ports/science/votca/work/.build/tools/include/votca/tools -isystem /usr/local/include -isystem /usr/local/include/eigen3 -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wno-sign-conversion -march=native -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -DNDEBUG -std=c++17 -fopenmp=libomp -MD -MT csg/src/tools/CMakeFiles/csg_imc_solve.dir/csg_imc_solve.cc.o -MF csg/src/tools/CMakeFiles/csg_imc_solve.dir/csg_imc_solve.cc.o.d -o csg/src/tools/CMakeFiles/csg_imc_solve.dir/csg_imc_solve.cc.o -c /wrkdirs/usr/ports/science/votca/work/votca-2022.1/csg/src/tools/csg_imc_solve.cc
[ 41% 140/331] : && /usr/bin/c++ -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wno-sign-conversion -march=native -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -DNDEBUG -fstack-protector-strong csg/src/tools/CMakeFiles/csg_imc_solve.dir/csg_imc_solve.cc.o -o csg/src/tools/csg_imc_solve -Wl,-rpath,/wrkdirs/usr/ports/science/votca/work/.build/csg/src/libcsg:/wrkdirs/usr/ports/science/votca/work/.build/tools/src/libtools:/usr/local/lib: csg/src/libcsg/libvotca_csg.so.2022 tools/src/libtools/libvotca_tools.so.2022 /usr/local/lib/libboost_program_options.so /usr/local/lib/libfftw3.so /usr/lib/libomp.so -Wl,-rpath-link,/usr/local/lib && :
[ 41% 141/331] cd /wrkdirs/usr/ports/science/votca/work/.build/csg/src/tools && /wrkdirs/usr/ports/science/votca/work/.build/tools/scripts/votca_help2doc --name /wrkdirs/usr/ports/science/votca/work/.build/csg/src/tools/csg_imc_solve --format groff --out csg_imc_solve.man
[ 42% 142/331] /usr/bin/c++ -I/wrkdirs/usr/ports/science/votca/work/votca-2022.1/csg/include -I/wrkdirs/usr/ports/science/votca/work/votca-2022.1/tools/include -I/wrkdirs/usr/ports/science/votca/work/.build/tools/include -I/wrkdirs/usr/ports/science/votca/work/.build/tools/include/votca/tools -isystem /usr/local/include -isystem /usr/local/include/eigen3 -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wno-sign-conversion -march=native -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -DNDEBUG -std=c++17 -fopenmp=libomp -MD -MT csg/src/csgapps/CMakeFiles/fluctuations.dir/fluctuations/fluctuations.cc.o -MF csg/src/csgapps/CMakeFiles/fluctuations.dir/fluctuations/fluctuations.cc.o.d -o csg/src/csgapps/CMakeFiles/fluctuations.dir/fluctuations/fluctuations.cc.o -c /wrkdirs/usr/ports/science/votca/work/votca-2022.1/csg/src/csgapps/fluctuations/fluctuations.cc
[ 42% 143/331] : && /usr/bin/c++ -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wno-sign-conversion -march=native -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -DNDEBUG -fstack-protector-strong csg/src/csgapps/CMakeFiles/fluctuations.dir/fluctuations/fluctuations.cc.o -o csg/src/csgapps/fluctuations/csg_fluctuations -Wl,-rpath,/wrkdirs/usr/ports/science/votca/work/.build/csg/src/libcsg:/wrkdirs/usr/ports/science/votca/work/.build/tools/src/libtools:/usr/local/lib: csg/src/libcsg/libvotca_csg.so.2022 tools/src/libtools/libvotca_tools.so.2022 /usr/local/lib/libboost_program_options.so /usr/local/lib/libfftw3.so /usr/lib/libomp.so -Wl,-rpath-link,/usr/local/lib && :
[ 42% 144/331] /usr/bin/c++ -I/wrkdirs/usr/ports/science/votca/work/votca-2022.1/csg/include -I/wrkdirs/usr/ports/science/votca/work/votca-2022.1/tools/include -I/wrkdirs/usr/ports/science/votca/work/.build/tools/include -I/wrkdirs/usr/ports/science/votca/work/.build/tools/include/votca/tools -isystem /usr/local/include -isystem /usr/local/include/eigen3 -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wno-sign-conversion -march=native -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -DNDEBUG -std=c++17 -fopenmp=libomp -MD -MT csg/src/csgapps/CMakeFiles/orientcorr.dir/orientcorr/orientcorr.cc.o -MF csg/src/csgapps/CMakeFiles/orientcorr.dir/orientcorr/orientcorr.cc.o.d -o csg/src/csgapps/CMakeFiles/orientcorr.dir/orientcorr/orientcorr.cc.o -c /wrkdirs/usr/ports/science/votca/work/votca-2022.1/csg/src/csgapps/orientcorr/orientcorr.cc
[ 43% 145/331] : && /usr/bin/c++ -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wno-sign-conversion -march=native -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -DNDEBUG -fstack-protector-strong csg/src/csgapps/CMakeFiles/orientcorr.dir/orientcorr/orientcorr.cc.o -o csg/src/csgapps/orientcorr/csg_orientcorr -Wl,-rpath,/wrkdirs/usr/ports/science/votca/work/.build/csg/src/libcsg:/wrkdirs/usr/ports/science/votca/work/.build/tools/src/libtools:/usr/local/lib: csg/src/libcsg/libvotca_csg.so.2022 tools/src/libtools/libvotca_tools.so.2022 /usr/local/lib/libboost_program_options.so /usr/local/lib/libfftw3.so /usr/lib/libomp.so -Wl,-rpath-link,/usr/local/lib && :
[ 43% 146/331] /usr/bin/c++ -I/wrkdirs/usr/ports/science/votca/work/votca-2022.1/csg/include -I/wrkdirs/usr/ports/science/votca/work/votca-2022.1/tools/include -I/wrkdirs/usr/ports/science/votca/work/.build/tools/include -I/wrkdirs/usr/ports/science/votca/work/.build/tools/include/votca/tools -isystem /usr/local/include -isystem /usr/local/include/eigen3 -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wno-sign-conversion -march=native -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -DNDEBUG -std=c++17 -fopenmp=libomp -MD -MT csg/src/csgapps/CMakeFiles/part_dist.dir/part_dist/part_dist.cc.o -MF csg/src/csgapps/CMakeFiles/part_dist.dir/part_dist/part_dist.cc.o.d -o csg/src/csgapps/CMakeFiles/part_dist.dir/part_dist/part_dist.cc.o -c /wrkdirs/usr/ports/science/votca/work/votca-2022.1/csg/src/csgapps/part_dist/part_dist.cc
[ 43% 147/331] : && /usr/bin/c++ -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wno-sign-conversion -march=native -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -DNDEBUG -fstack-protector-strong csg/src/csgapps/CMakeFiles/part_dist.dir/part_dist/part_dist.cc.o -o csg/src/csgapps/part_dist/csg_part_dist -Wl,-rpath,/wrkdirs/usr/ports/science/votca/work/.build/csg/src/libcsg:/wrkdirs/usr/ports/science/votca/work/.build/tools/src/libtools:/usr/local/lib: csg/src/libcsg/libvotca_csg.so.2022 tools/src/libtools/libvotca_tools.so.2022 /usr/local/lib/libboost_program_options.so /usr/local/lib/libfftw3.so /usr/lib/libomp.so -Wl,-rpath-link,/usr/local/lib && :
[ 44% 148/331] /usr/bin/c++ -I/wrkdirs/usr/ports/science/votca/work/votca-2022.1/csg/include -I/wrkdirs/usr/ports/science/votca/work/votca-2022.1/tools/include -I/wrkdirs/usr/ports/science/votca/work/.build/tools/include -I/wrkdirs/usr/ports/science/votca/work/.build/tools/include/votca/tools -isystem /usr/local/include -isystem /usr/local/include/eigen3 -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wno-sign-conversion -march=native -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -DNDEBUG -std=c++17 -fopenmp=libomp -MD -MT csg/src/csgapps/CMakeFiles/partial_rdf.dir/partial_rdf/partial_rdf.cc.o -MF csg/src/csgapps/CMakeFiles/partial_rdf.dir/partial_rdf/partial_rdf.cc.o.d -o csg/src/csgapps/CMakeFiles/partial_rdf.dir/partial_rdf/partial_rdf.cc.o -c /wrkdirs/usr/ports/science/votca/work/votca-2022.1/csg/src/csgapps/partial_rdf/partial_rdf.cc
[ 44% 149/331] /usr/bin/c++ -I/wrkdirs/usr/ports/science/votca/work/votca-2022.1/csg/include -I/wrkdirs/usr/ports/science/votca/work/votca-2022.1/tools/include -I/wrkdirs/usr/ports/science/votca/work/.build/tools/include -I/wrkdirs/usr/ports/science/votca/work/.build/tools/include/votca/tools -isystem /usr/local/include -isystem /usr/local/include/eigen3 -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wno-sign-conversion -march=native -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -DNDEBUG -std=c++17 -fopenmp=libomp -MD -MT csg/src/csgapps/CMakeFiles/radii.dir/radii/radii.cc.o -MF csg/src/csgapps/CMakeFiles/radii.dir/radii/radii.cc.o.d -o csg/src/csgapps/CMakeFiles/radii.dir/radii/radii.cc.o -c /wrkdirs/usr/ports/science/votca/work/votca-2022.1/csg/src/csgapps/radii/radii.cc
[ 44% 150/331] : && /usr/bin/c++ -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wno-sign-conversion -march=native -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -DNDEBUG -fstack-protector-strong csg/src/csgapps/CMakeFiles/radii.dir/radii/radii.cc.o -o csg/src/csgapps/radii/csg_radii -Wl,-rpath,/wrkdirs/usr/ports/science/votca/work/.build/csg/src/libcsg:/wrkdirs/usr/ports/science/votca/work/.build/tools/src/libtools:/usr/local/lib: csg/src/libcsg/libvotca_csg.so.2022 tools/src/libtools/libvotca_tools.so.2022 /usr/local/lib/libboost_program_options.so /usr/local/lib/libfftw3.so /usr/lib/libomp.so -Wl,-rpath-link,/usr/local/lib && :
[ 45% 151/331] /usr/bin/c++ -I/wrkdirs/usr/ports/science/votca/work/votca-2022.1/csg/include -I/wrkdirs/usr/ports/science/votca/work/votca-2022.1/tools/include -I/wrkdirs/usr/ports/science/votca/work/.build/tools/include -I/wrkdirs/usr/ports/science/votca/work/.build/tools/include/votca/tools -isystem /usr/local/include -isystem /usr/local/include/eigen3 -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wno-sign-conversion -march=native -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -DNDEBUG -std=c++17 -fopenmp=libomp -MD -MT csg/src/csgapps/CMakeFiles/partial_rdf.dir/partial_rdf/rdf_calculator.cc.o -MF csg/src/csgapps/CMakeFiles/partial_rdf.dir/partial_rdf/rdf_calculator.cc.o.d -o csg/src/csgapps/CMakeFiles/partial_rdf.dir/partial_rdf/rdf_calculator.cc.o -c /wrkdirs/usr/ports/science/votca/work/votca-2022.1/csg/src/csgapps/partial_rdf/rdf_calculator.cc
[ 45% 152/331] : && /usr/bin/c++ -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wno-sign-conversion -march=native -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -DNDEBUG -fstack-protector-strong csg/src/csgapps/CMakeFiles/partial_rdf.dir/partial_rdf/partial_rdf.cc.o csg/src/csgapps/CMakeFiles/partial_rdf.dir/partial_rdf/rdf_calculator.cc.o -o csg/src/csgapps/partial_rdf/csg_partial_rdf -Wl,-rpath,/wrkdirs/usr/ports/science/votca/work/.build/csg/src/libcsg:/wrkdirs/usr/ports/science/votca/work/.build/tools/src/libtools:/usr/local/lib: csg/src/libcsg/libvotca_csg.so.2022 tools/src/libtools/libvotca_tools.so.2022 /usr/local/lib/libboost_program_options.so /usr/local/lib/libfftw3.so /usr/lib/libomp.so -Wl,-rpath-link,/usr/local/lib && :
[ 45% 153/331] cd /wrkdirs/usr/ports/science/votca/work/.build/csg/src/csgapps && /wrkdirs/usr/ports/science/votca/work/.build/tools/scripts/votca_help2doc --name fluctuations/csg_fluctuations --format groff --out fluctuations.man
[ 45% 154/331] cd /wrkdirs/usr/ports/science/votca/work/.build/csg/src/csgapps && /wrkdirs/usr/ports/science/votca/work/.build/tools/scripts/votca_help2doc --name orientcorr/csg_orientcorr --format groff --out orientcorr.man
[ 46% 155/331] cd /wrkdirs/usr/ports/science/votca/work/.build/csg/src/csgapps && /wrkdirs/usr/ports/science/votca/work/.build/tools/scripts/votca_help2doc --name part_dist/csg_part_dist --format groff --out part_dist.man
[ 46% 156/331] cd /wrkdirs/usr/ports/science/votca/work/.build/csg/src/csgapps && /wrkdirs/usr/ports/science/votca/work/.build/tools/scripts/votca_help2doc --name partial_rdf/csg_partial_rdf --format groff --out partial_rdf.man
[ 46% 157/331] cd /wrkdirs/usr/ports/science/votca/work/.build/csg/src/csgapps && /wrkdirs/usr/ports/science/votca/work/.build/tools/scripts/votca_help2doc --name radii/csg_radii --format groff --out radii.man
[ 47% 158/331] cd /wrkdirs/usr/ports/science/votca/work/.build/csg/scripts && /usr/local/bin/cmake -DINPUT="csg_call.in2" -DOUTPUT="csg_call" -DGIT_EXECUTABLE="" -DTOP_SOURCE_DIR="/wrkdirs/usr/ports/science/votca/work/votca-2022.1" -P /wrkdirs/usr/ports/science/votca/work/votca-2022.1/csg/CMakeModules/gitscript.cmake
[ 47% 159/331] cd /wrkdirs/usr/ports/science/votca/work/.build/csg/scripts && /usr/local/bin/cmake -E env VOTCASHARE="/wrkdirs/usr/ports/science/votca/work/votca-2022.1/csg/share" PATH="/wrkdirs/usr/ports/science/votca/work/.build/csg/scripts:/wrkdirs/usr/ports/science/votca/work/.build/csg/src/tools:/wrkdirs/usr/ports/science/votca/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin" VOTCA_CSG_DEFAULTS="/wrkdirs/usr/ports/science/votca/work/.build/csg/share/xml/csg_defaults.xml" /wrkdirs/usr/ports/science/votca/work/.build/tools/scripts/votca_help2doc --name /wrkdirs/usr/ports/science/votca/work/.build/csg/scripts/csg_call --format groff --out csg_call.man
[ 47% 160/331] cd /wrkdirs/usr/ports/science/votca/work/.build/csg/scripts && /usr/local/bin/cmake -DINPUT="csg_inverse.in2" -DOUTPUT="csg_inverse" -DGIT_EXECUTABLE="" -DTOP_SOURCE_DIR="/wrkdirs/usr/ports/science/votca/work/votca-2022.1" -P /wrkdirs/usr/ports/science/votca/work/votca-2022.1/csg/CMakeModules/gitscript.cmake
[ 48% 161/331] cd /wrkdirs/usr/ports/science/votca/work/.build/csg/scripts && /usr/local/bin/cmake -E env VOTCASHARE="/wrkdirs/usr/ports/science/votca/work/votca-2022.1/csg/share" PATH="/wrkdirs/usr/ports/science/votca/work/.build/csg/scripts:/wrkdirs/usr/ports/science/votca/work/.build/csg/src/tools:/wrkdirs/usr/ports/science/votca/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin" VOTCA_CSG_DEFAULTS="/wrkdirs/usr/ports/science/votca/work/.build/csg/share/xml/csg_defaults.xml" /wrkdirs/usr/ports/science/votca/work/.build/tools/scripts/votca_help2doc --name /wrkdirs/usr/ports/science/votca/work/.build/csg/scripts/csg_inverse --format groff --out csg_inverse.man
[ 48% 162/331] /usr/bin/c++ -I/wrkdirs/usr/ports/science/votca/work/votca-2022.1/csg/include -I/wrkdirs/usr/ports/science/votca/work/votca-2022.1/tools/include -I/wrkdirs/usr/ports/science/votca/work/.build/tools/include -I/wrkdirs/usr/ports/science/votca/work/.build/tools/include/votca/tools -isystem /usr/local/include -isystem /usr/local/include/eigen3 -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wno-sign-conversion -march=native -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -DNDEBUG -std=c++17 -fopenmp=libomp -MD -MT csg/src/csgapps/CMakeFiles/sphericalorder.dir/sphericalorder/sphericalorder.cc.o -MF csg/src/csgapps/CMakeFiles/sphericalorder.dir/sphericalorder/sphericalorder.cc.o.d -o csg/src/csgapps/CMakeFiles/sphericalorder.dir/sphericalorder/sphericalorder.cc.o -c /wrkdirs/usr/ports/science/votca/work/votca-2022.1/csg/src/csgapps/sphericalorder/sphericalorder.cc
[ 48% 163/331] : && /usr/bin/c++ -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wno-sign-conversion -march=native -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -DNDEBUG -fstack-protector-strong csg/src/csgapps/CMakeFiles/sphericalorder.dir/sphericalorder/sphericalorder.cc.o -o csg/src/csgapps/sphericalorder/csg_sphericalorder -Wl,-rpath,/wrkdirs/usr/ports/science/votca/work/.build/csg/src/libcsg:/wrkdirs/usr/ports/science/votca/work/.build/tools/src/libtools:/usr/local/lib: csg/src/libcsg/libvotca_csg.so.2022 tools/src/libtools/libvotca_tools.so.2022 /usr/local/lib/libboost_program_options.so /usr/local/lib/libfftw3.so /usr/lib/libomp.so -Wl,-rpath-link,/usr/local/lib && :
[ 48% 164/331] cd /wrkdirs/usr/ports/science/votca/work/.build/csg/src/csgapps && /wrkdirs/usr/ports/science/votca/work/.build/tools/scripts/votca_help2doc --name sphericalorder/csg_sphericalorder --format groff --out sphericalorder.man
[ 49% 165/331] /usr/bin/c++ -I/wrkdirs/usr/ports/science/votca/work/votca-2022.1/csg/include -I/wrkdirs/usr/ports/science/votca/work/votca-2022.1/tools/include -I/wrkdirs/usr/ports/science/votca/work/.build/tools/include -I/wrkdirs/usr/ports/science/votca/work/.build/tools/include/votca/tools -isystem /usr/local/include -isystem /usr/local/include/eigen3 -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wno-sign-conversion -march=native -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -DNDEBUG -std=c++17 -fopenmp=libomp -MD -MT csg/src/csgapps/CMakeFiles/traj_force.dir/traj_force/traj_force.cc.o -MF csg/src/csgapps/CMakeFiles/traj_force.dir/traj_force/traj_force.cc.o.d -o csg/src/csgapps/CMakeFiles/traj_force.dir/traj_force/traj_force.cc.o -c /wrkdirs/usr/ports/science/votca/work/votca-2022.1/csg/src/csgapps/traj_force/traj_force.cc
[ 49% 166/331] : && /usr/bin/c++ -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wno-sign-conversion -march=native -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -DNDEBUG -fstack-protector-strong csg/src/csgapps/CMakeFiles/traj_force.dir/traj_force/traj_force.cc.o -o csg/src/csgapps/traj_force/csg_traj_force -Wl,-rpath,/wrkdirs/usr/ports/science/votca/work/.build/csg/src/libcsg:/wrkdirs/usr/ports/science/votca/work/.build/tools/src/libtools:/usr/local/lib: csg/src/libcsg/libvotca_csg.so.2022 tools/src/libtools/libvotca_tools.so.2022 /usr/local/lib/libboost_program_options.so /usr/local/lib/libfftw3.so /usr/lib/libomp.so -Wl,-rpath-link,/usr/local/lib && :
[ 49% 167/331] cd /wrkdirs/usr/ports/science/votca/work/.build/csg/src/csgapps && /wrkdirs/usr/ports/science/votca/work/.build/tools/scripts/votca_help2doc --name traj_force/csg_traj_force --format groff --out traj_force.man
[ 50% 168/331] cd /wrkdirs/usr/ports/science/votca/work/.build/xtp/scripts && /usr/local/bin/cmake -DINPUT="xtp_basisset.in2" -DOUTPUT="xtp_basisset" -DGIT_EXECUTABLE="" -DTOP_SOURCE_DIR="/wrkdirs/usr/ports/science/votca/work/votca-2022.1" -P /wrkdirs/usr/ports/science/votca/work/votca-2022.1/xtp/CMakeModules/gitscript.cmake
[ 50% 169/331] cd /wrkdirs/usr/ports/science/votca/work/.build/xtp/scripts && /wrkdirs/usr/ports/science/votca/work/.build/tools/scripts/votca_help2doc --name xtp_basisset --format groff --out xtp_basisset.man
[ 50% 170/331] cd /wrkdirs/usr/ports/science/votca/work/.build/xtp/scripts && /usr/local/bin/cmake -DINPUT="xtp_update_mapfile.in2" -DOUTPUT="xtp_update_mapfile" -DGIT_EXECUTABLE="" -DTOP_SOURCE_DIR="/wrkdirs/usr/ports/science/votca/work/votca-2022.1" -P /wrkdirs/usr/ports/science/votca/work/votca-2022.1/xtp/CMakeModules/gitscript.cmake
[ 51% 171/331] cd /wrkdirs/usr/ports/science/votca/work/.build/xtp/scripts && /wrkdirs/usr/ports/science/votca/work/.build/tools/scripts/votca_help2doc --name xtp_update_mapfile --format groff --out xtp_update_mapfile.man
[ 51% 172/331] cd /wrkdirs/usr/ports/science/votca/work/.build/xtp/scripts && /usr/local/bin/cmake -DINPUT="xtp_modify_jobfile.in2" -DOUTPUT="xtp_modify_jobfile" -DGIT_EXECUTABLE="" -DTOP_SOURCE_DIR="/wrkdirs/usr/ports/science/votca/work/votca-2022.1" -P /wrkdirs/usr/ports/science/votca/work/votca-2022.1/xtp/CMakeModules/gitscript.cmake
[ 51% 173/331] cd /wrkdirs/usr/ports/science/votca/work/.build/xtp/scripts && /wrkdirs/usr/ports/science/votca/work/.build/tools/scripts/votca_help2doc --name xtp_modify_jobfile --format groff --out xtp_modify_jobfile.man
[ 51% 174/331] cd /wrkdirs/usr/ports/science/votca/work/.build/xtp/scripts && /usr/local/bin/cmake -DINPUT="xtp_autogen_mapping.in2" -DOUTPUT="xtp_autogen_mapping" -DGIT_EXECUTABLE="" -DTOP_SOURCE_DIR="/wrkdirs/usr/ports/science/votca/work/votca-2022.1" -P /wrkdirs/usr/ports/science/votca/work/votca-2022.1/xtp/CMakeModules/gitscript.cmake
[ 52% 175/331] /usr/bin/c++ -I/wrkdirs/usr/ports/science/votca/work/votca-2022.1/csg/include -I/wrkdirs/usr/ports/science/votca/work/votca-2022.1/tools/include -I/wrkdirs/usr/ports/science/votca/work/.build/tools/include -I/wrkdirs/usr/ports/science/votca/work/.build/tools/include/votca/tools -isystem /usr/local/include -isystem /usr/local/include/eigen3 -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wno-sign-conversion -march=native -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -DNDEBUG -std=c++17 -fopenmp=libomp -MD -MT csg/share/template/CMakeFiles/template_serial.dir/template_serial.cc.o -MF csg/share/template/CMakeFiles/template_serial.dir/template_serial.cc.o.d -o csg/share/template/CMakeFiles/template_serial.dir/template_serial.cc.o -c /wrkdirs/usr/ports/science/votca/work/votca-2022.1/csg/share/template/template_serial.cc
[ 52% 176/331] : && /usr/bin/c++ -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wno-sign-conversion -march=native -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -DNDEBUG -fstack-protector-strong csg/share/template/CMakeFiles/template_serial.dir/template_serial.cc.o -o csg/share/template/template_serial -Wl,-rpath,/wrkdirs/usr/ports/science/votca/work/.build/csg/src/libcsg:/wrkdirs/usr/ports/science/votca/work/.build/tools/src/libtools:/usr/local/lib csg/src/libcsg/libvotca_csg.so.2022 tools/src/libtools/libvotca_tools.so.2022 /usr/local/lib/libboost_program_options.so /usr/local/lib/libfftw3.so /usr/lib/libomp.so -Wl,-rpath-link,/usr/local/lib && :
[ 52% 177/331] cd /wrkdirs/usr/ports/science/votca/work/.build/xtp/scripts && /usr/local/bin/cmake -DINPUT="xtp_qmmm2qm.in2" -DOUTPUT="xtp_qmmm2qm" -DGIT_EXECUTABLE="" -DTOP_SOURCE_DIR="/wrkdirs/usr/ports/science/votca/work/votca-2022.1" -P /wrkdirs/usr/ports/science/votca/work/votca-2022.1/xtp/CMakeModules/gitscript.cmake
[ 53% 178/331] cd /wrkdirs/usr/ports/science/votca/work/.build/xtp/scripts && /wrkdirs/usr/ports/science/votca/work/.build/tools/scripts/votca_help2doc --name xtp_qmmm2qm --format groff --out xtp_qmmm2qm.man
[ 53% 179/331] cd /wrkdirs/usr/ports/science/votca/work/.build/xtp/src/libxtp && /usr/local/bin/cmake -DTOP_SOURCE_DIR="/wrkdirs/usr/ports/science/votca/work/votca-2022.1" -DGIT_EXECUTABLE="" -P /wrkdirs/usr/ports/science/votca/work/votca-2022.1/xtp/CMakeModules/gitversion.cmake
[ 53% 180/331] cd /wrkdirs/usr/ports/science/votca/work/.build/xtp/scripts && /wrkdirs/usr/ports/science/votca/work/.build/tools/scripts/votca_help2doc --name xtp_autogen_mapping --format groff --out xtp_autogen_mapping.man
[ 54% 181/331] /usr/bin/c++ -I/wrkdirs/usr/ports/science/votca/work/votca-2022.1/csg/include -I/wrkdirs/usr/ports/science/votca/work/votca-2022.1/tools/include -I/wrkdirs/usr/ports/science/votca/work/.build/tools/include -I/wrkdirs/usr/ports/science/votca/work/.build/tools/include/votca/tools -isystem /usr/local/include -isystem /usr/local/include/eigen3 -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wno-sign-conversion -march=native -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -DNDEBUG -std=c++17 -fopenmp=libomp -MD -MT csg/share/template/CMakeFiles/template_threaded.dir/template_threaded.cc.o -MF csg/share/template/CMakeFiles/template_threaded.dir/template_threaded.cc.o.d -o csg/share/template/CMakeFiles/template_threaded.dir/template_threaded.cc.o -c /wrkdirs/usr/ports/science/votca/work/votca-2022.1/csg/share/template/template_threaded.cc
[ 54% 182/331] : && /usr/bin/c++ -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wno-sign-conversion -march=native -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -DNDEBUG -fstack-protector-strong csg/share/template/CMakeFiles/template_threaded.dir/template_threaded.cc.o -o csg/share/template/template_threaded -Wl,-rpath,/wrkdirs/usr/ports/science/votca/work/.build/csg/src/libcsg:/wrkdirs/usr/ports/science/votca/work/.build/tools/src/libtools:/usr/local/lib csg/src/libcsg/libvotca_csg.so.2022 tools/src/libtools/libvotca_tools.so.2022 /usr/local/lib/libboost_program_options.so /usr/local/lib/libfftw3.so /usr/lib/libomp.so -Wl,-rpath-link,/usr/local/lib && :
[ 54% 183/331] /usr/bin/c++ -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/wrkdirs/usr/ports/science/votca/work/.build/xtp/src/libxtp -I/wrkdirs/usr/ports/science/votca/work/votca-2022.1/xtp/src/libxtp -I/wrkdirs/usr/ports/science/votca/work/votca-2022.1/xtp/include -I/wrkdirs/usr/ports/science/votca/work/.build/xtp/include -I/wrkdirs/usr/ports/science/votca/work/.build/xtp/include/votca/xtp -I/wrkdirs/usr/ports/science/votca/work/votca-2022.1/csg/include -I/wrkdirs/usr/ports/science/votca/work/votca-2022.1/tools/include -I/wrkdirs/usr/ports/science/votca/work/.build/tools/include -I/wrkdirs/usr/ports/science/votca/work/.build/tools/include/votca/tools -isystem /usr/local/include -isystem /usr/local/include/eigen3 -isystem /usr/local/include/libecpint -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wno-sign-conversion -march=native -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -DNDEBUG -std=c++17 -fPIC -fopenmp=libomp
-MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/GaussianQuadratureBase.cc.o -MF xtp/src/libxtp/CMakeFiles/votca_xtp.dir/GaussianQuadratureBase.cc.o.d -o xtp/src/libxtp/CMakeFiles/votca_xtp.dir/GaussianQuadratureBase.cc.o -c /wrkdirs/usr/ports/science/votca/work/votca-2022.1/xtp/src/libxtp/GaussianQuadratureBase.cc
[ 54% 184/331] /usr/bin/c++ -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/wrkdirs/usr/ports/science/votca/work/.build/xtp/src/libxtp -I/wrkdirs/usr/ports/science/votca/work/votca-2022.1/xtp/src/libxtp -I/wrkdirs/usr/ports/science/votca/work/votca-2022.1/xtp/include -I/wrkdirs/usr/ports/science/votca/work/.build/xtp/include -I/wrkdirs/usr/ports/science/votca/work/.build/xtp/include/votca/xtp -I/wrkdirs/usr/ports/science/votca/work/votca-2022.1/csg/include -I/wrkdirs/usr/ports/science/votca/work/votca-2022.1/tools/include -I/wrkdirs/usr/ports/science/votca/work/.build/tools/include -I/wrkdirs/usr/ports/science/votca/work/.build/tools/include/votca/tools -isystem /usr/local/include -isystem /usr/local/include/eigen3 -isystem /usr/local/include/libecpint -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wno-sign-conversion -march=native -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -DNDEBUG -std=c++17 -fPIC -fopenmp=libomp
-MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/IndexParser.cc.o -MF xtp/src/libxtp/CMakeFiles/votca_xtp.dir/IndexParser.cc.o.d -o xtp/src/libxtp/CMakeFiles/votca_xtp.dir/IndexParser.cc.o -c /wrkdirs/usr/ports/science/votca/work/votca-2022.1/xtp/src/libxtp/IndexParser.cc
[ 55% 185/331] /usr/bin/c++ -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/wrkdirs/usr/ports/science/votca/work/.build/xtp/src/libxtp -I/wrkdirs/usr/ports/science/votca/work/votca-2022.1/xtp/src/libxtp -I/wrkdirs/usr/ports/science/votca/work/votca-2022.1/xtp/include -I/wrkdirs/usr/ports/science/votca/work/.build/xtp/include -I/wrkdirs/usr/ports/science/votca/work/.build/xtp/include/votca/xtp -I/wrkdirs/usr/ports/science/votca/work/votca-2022.1/csg/include -I/wrkdirs/usr/ports/science/votca/work/votca-2022.1/tools/include -I/wrkdirs/usr/ports/science/votca/work/.build/tools/include -I/wrkdirs/usr/ports/science/votca/work/.build/tools/include/votca/tools -isystem /usr/local/include -isystem /usr/local/include/eigen3 -isystem /usr/local/include/libecpint -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wno-sign-conversion -march=native -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -DNDEBUG -std=c++17 -fPIC -fopenmp=libomp
-MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/ImaginaryAxisIntegration.cc.o -MF xtp/src/libxtp/CMakeFiles/votca_xtp.dir/ImaginaryAxisIntegration.cc.o.d -o xtp/src/libxtp/CMakeFiles/votca_xtp.dir/ImaginaryAxisIntegration.cc.o -c /wrkdirs/usr/ports/science/votca/work/votca-2022.1/xtp/src/libxtp/ImaginaryAxisIntegration.cc
[ 55% 186/331] /usr/bin/c++ -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/wrkdirs/usr/ports/science/votca/work/.build/xtp/src/libxtp -I/wrkdirs/usr/ports/science/votca/work/votca-2022.1/xtp/src/libxtp -I/wrkdirs/usr/ports/science/votca/work/votca-2022.1/xtp/include -I/wrkdirs/usr/ports/science/votca/work/.build/xtp/include -I/wrkdirs/usr/ports/science/votca/work/.build/xtp/include/votca/xtp -I/wrkdirs/usr/ports/science/votca/work/votca-2022.1/csg/include -I/wrkdirs/usr/ports/science/votca/work/votca-2022.1/tools/include -I/wrkdirs/usr/ports/science/votca/work/.build/tools/include -I/wrkdirs/usr/ports/science/votca/work/.build/tools/include/votca/tools -isystem /usr/local/include -isystem /usr/local/include/eigen3 -isystem /usr/local/include/libecpint -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wno-sign-conversion -march=native -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -DNDEBUG -std=c++17 -fPIC -fopenmp=libomp
-MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/anderson_mixing.cc.o -MF xtp/src/libxtp/CMakeFiles/votca_xtp.dir/anderson_mixing.cc.o.d -o xtp/src/libxtp/CMakeFiles/votca_xtp.dir/anderson_mixing.cc.o -c /wrkdirs/usr/ports/science/votca/work/votca-2022.1/xtp/src/libxtp/anderson_mixing.cc
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[ 59% 200/331] /usr/bin/c++ -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/wrkdirs/usr/ports/science/votca/work/.build/xtp/src/libxtp -I/wrkdirs/usr/ports/science/votca/work/votca-2022.1/xtp/src/libxtp -I/wrkdirs/usr/ports/science/votca/work/votca-2022.1/xtp/include -I/wrkdirs/usr/ports/science/votca/work/.build/xtp/include -I/wrkdirs/usr/ports/science/votca/work/.build/xtp/include/votca/xtp -I/wrkdirs/usr/ports/science/votca/work/votca-2022.1/csg/include -I/wrkdirs/usr/ports/science/votca/work/votca-2022.1/tools/include -I/wrkdirs/usr/ports/science/votca/work/.build/tools/include -I/wrkdirs/usr/ports/science/votca/work/.build/tools/include/votca/tools -isystem /usr/local/include -isystem /usr/local/include/eigen3 -isystem /usr/local/include/libecpint -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wno-sign-conversion -march=native -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -DNDEBUG -std=c++17 -fPIC -fopenmp=libomp
-MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/calculators/ianalyze.cc.o -MF xtp/src/libxtp/CMakeFiles/votca_xtp.dir/calculators/ianalyze.cc.o.d -o xtp/src/libxtp/CMakeFiles/votca_xtp.dir/calculators/ianalyze.cc.o -c /wrkdirs/usr/ports/science/votca/work/votca-2022.1/xtp/src/libxtp/calculators/ianalyze.cc
[ 60% 201/331] /usr/bin/c++ -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/wrkdirs/usr/ports/science/votca/work/.build/xtp/src/libxtp -I/wrkdirs/usr/ports/science/votca/work/votca-2022.1/xtp/src/libxtp -I/wrkdirs/usr/ports/science/votca/work/votca-2022.1/xtp/include -I/wrkdirs/usr/ports/science/votca/work/.build/xtp/include -I/wrkdirs/usr/ports/science/votca/work/.build/xtp/include/votca/xtp -I/wrkdirs/usr/ports/science/votca/work/votca-2022.1/csg/include -I/wrkdirs/usr/ports/science/votca/work/votca-2022.1/tools/include -I/wrkdirs/usr/ports/science/votca/work/.build/tools/include -I/wrkdirs/usr/ports/science/votca/work/.build/tools/include/votca/tools -isystem /usr/local/include -isystem /usr/local/include/eigen3 -isystem /usr/local/include/libecpint -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wno-sign-conversion -march=native -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -DNDEBUG -std=c++17 -fPIC -fopenmp=libomp
-MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/calculators/kmclifetime.cc.o -MF xtp/src/libxtp/CMakeFiles/votca_xtp.dir/calculators/kmclifetime.cc.o.d -o xtp/src/libxtp/CMakeFiles/votca_xtp.dir/calculators/kmclifetime.cc.o -c /wrkdirs/usr/ports/science/votca/work/votca-2022.1/xtp/src/libxtp/calculators/kmclifetime.cc
FAILED: xtp/src/libxtp/CMakeFiles/votca_xtp.dir/calculators/kmclifetime.cc.o
/usr/bin/c++ -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/wrkdirs/usr/ports/science/votca/work/.build/xtp/src/libxtp -I/wrkdirs/usr/ports/science/votca/work/votca-2022.1/xtp/src/libxtp -I/wrkdirs/usr/ports/science/votca/work/votca-2022.1/xtp/include -I/wrkdirs/usr/ports/science/votca/work/.build/xtp/include -I/wrkdirs/usr/ports/science/votca/work/.build/xtp/include/votca/xtp -I/wrkdirs/usr/ports/science/votca/work/votca-2022.1/csg/include -I/wrkdirs/usr/ports/science/votca/work/votca-2022.1/tools/include -I/wrkdirs/usr/ports/science/votca/work/.build/tools/include -I/wrkdirs/usr/ports/science/votca/work/.build/tools/include/votca/tools -isystem /usr/local/include -isystem /usr/local/include/eigen3 -isystem /usr/local/include/libecpint -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wno-sign-conversion -march=native -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -DNDEBUG -std=c++17 -fPIC -fopenmp=libomp -MD -MT xtp/sr
c/libxtp/CMakeFiles/votca_xtp.dir/calculators/kmclifetime.cc.o -MF xtp/src/libxtp/CMakeFiles/votca_xtp.dir/calculators/kmclifetime.cc.o.d -o xtp/src/libxtp/CMakeFiles/votca_xtp.dir/calculators/kmclifetime.cc.o -c /wrkdirs/usr/ports/science/votca/work/votca-2022.1/xtp/src/libxtp/calculators/kmclifetime.cc
In file included from /wrkdirs/usr/ports/science/votca/work/votca-2022.1/xtp/src/libxtp/calculators/kmclifetime.cc:24:
/usr/local/include/boost/progress.hpp:23:3: error: This header is deprecated and will be removed. (You can define BOOST_TIMER_ENABLE_DEPRECATED to suppress this error.)
# error This header is deprecated and will be removed. (You can define BOOST_TIMER_ENABLE_DEPRECATED to suppress this error.)
^
In file included from /wrkdirs/usr/ports/science/votca/work/votca-2022.1/xtp/src/libxtp/calculators/kmclifetime.cc:24:
In file included from /usr/local/include/boost/progress.hpp:29:
/usr/local/include/boost/timer.hpp:21:3: error: This header is deprecated and will be removed. (You can define BOOST_TIMER_ENABLE_DEPRECATED to suppress this error.)
# error This header is deprecated and will be removed. (You can define BOOST_TIMER_ENABLE_DEPRECATED to suppress this error.)
^
2 errors generated.
[ 60% 201/331] /usr/bin/c++ -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/wrkdirs/usr/ports/science/votca/work/.build/xtp/src/libxtp -I/wrkdirs/usr/ports/science/votca/work/votca-2022.1/xtp/src/libxtp -I/wrkdirs/usr/ports/science/votca/work/votca-2022.1/xtp/include -I/wrkdirs/usr/ports/science/votca/work/.build/xtp/include -I/wrkdirs/usr/ports/science/votca/work/.build/xtp/include/votca/xtp -I/wrkdirs/usr/ports/science/votca/work/votca-2022.1/csg/include -I/wrkdirs/usr/ports/science/votca/work/votca-2022.1/tools/include -I/wrkdirs/usr/ports/science/votca/work/.build/tools/include -I/wrkdirs/usr/ports/science/votca/work/.build/tools/include/votca/tools -isystem /usr/local/include -isystem /usr/local/include/eigen3 -isystem /usr/local/include/libecpint -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wno-sign-conversion -march=native -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -DNDEBUG -std=c++17 -fPIC -fopenmp=libomp
-MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/calculators/kmcmultiple.cc.o -MF xtp/src/libxtp/CMakeFiles/votca_xtp.dir/calculators/kmcmultiple.cc.o.d -o xtp/src/libxtp/CMakeFiles/votca_xtp.dir/calculators/kmcmultiple.cc.o -c /wrkdirs/usr/ports/science/votca/work/votca-2022.1/xtp/src/libxtp/calculators/kmcmultiple.cc
[ 60% 201/331] /usr/bin/c++ -DUSING_Libxc -Dvotca_xtp_EXPORTS -I/wrkdirs/usr/ports/science/votca/work/.build/xtp/src/libxtp -I/wrkdirs/usr/ports/science/votca/work/votca-2022.1/xtp/src/libxtp -I/wrkdirs/usr/ports/science/votca/work/votca-2022.1/xtp/include -I/wrkdirs/usr/ports/science/votca/work/.build/xtp/include -I/wrkdirs/usr/ports/science/votca/work/.build/xtp/include/votca/xtp -I/wrkdirs/usr/ports/science/votca/work/votca-2022.1/csg/include -I/wrkdirs/usr/ports/science/votca/work/votca-2022.1/tools/include -I/wrkdirs/usr/ports/science/votca/work/.build/tools/include -I/wrkdirs/usr/ports/science/votca/work/.build/tools/include/votca/tools -isystem /usr/local/include -isystem /usr/local/include/eigen3 -isystem /usr/local/include/libecpint -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wall -Wextra -Wpedantic -Wshadow -Wconversion -Wno-sign-conversion -march=native -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -DNDEBUG -std=c++17 -fPIC -fopenmp=libomp
-MD -MT xtp/src/libxtp/CMakeFiles/votca_xtp.dir/bsecoupling.cc.o -MF xtp/src/libxtp/CMakeFiles/votca_xtp.dir/bsecoupling.cc.o.d -o xtp/src/libxtp/CMakeFiles/votca_xtp.dir/bsecoupling.cc.o -c /wrkdirs/usr/ports/science/votca/work/votca-2022.1/xtp/src/libxtp/bsecoupling.cc
ninja: build stopped: subcommand failed.
===> Compilation failed unexpectedly.
Try to set MAKE_JOBS_UNSAFE=yes and rebuild before reporting the failure to
the maintainer.
*** Error code 1
Stop.
make: stopped in /usr/ports/science/votca