[package - main-amd64-default][math/alps] Failed for coin-or-alps-2.0.1_2 in build
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Date: Sat, 24 Jun 2023 18:53:59 UTC
You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.
Maintainer: yuri@FreeBSD.org
Log URL: https://pkg-status.freebsd.org/beefy18/data/main-amd64-default/p4785b313b958_se8efee297c/logs/coin-or-alps-2.0.1_2.log
Build URL: https://pkg-status.freebsd.org/beefy18/build.html?mastername=main-amd64-default&build=p4785b313b958_se8efee297c
Log:
=>> Building math/alps
build started at Sat Jun 24 18:53:39 UTC 2023
port directory: /usr/ports/math/alps
package name: coin-or-alps-2.0.1_2
building for: FreeBSD main-amd64-default-job-08 14.0-CURRENT FreeBSD 14.0-CURRENT 1400091 amd64
maintained by: yuri@FreeBSD.org
Makefile ident:
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!!! Jail is newer than host. (Jail: 1400091, Host: 1400089) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!
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=======================<phase: check-sanity >============================
===> License EPL accepted by the user
===========================================================================
=======================<phase: pkg-depends >============================
===> coin-or-alps-2.0.1_2 depends on file: /usr/local/sbin/pkg - not found
===> Installing existing package /packages/All/pkg-1.19.1_1.pkg
[main-amd64-default-job-08] Installing pkg-1.19.1_1...
[main-amd64-default-job-08] Extracting pkg-1.19.1_1: .......... done
===> coin-or-alps-2.0.1_2 depends on file: /usr/local/sbin/pkg - found
===> Returning to build of coin-or-alps-2.0.1_2
===========================================================================
=======================<phase: fetch-depends >============================
===========================================================================
=======================<phase: fetch >============================
===> License EPL accepted by the user
===> Fetching all distfiles required by coin-or-alps-2.0.1_2 for building
===========================================================================
=======================<phase: checksum >============================
===> License EPL accepted by the user
===> Fetching all distfiles required by coin-or-alps-2.0.1_2 for building
=> SHA256 Checksum OK for coin-or-CHiPPS-ALPS-releases-2.0.1_GH0.tar.gz.
===========================================================================
=======================<phase: extract-depends>============================
===========================================================================
=======================<phase: extract >============================
===> License EPL accepted by the user
===> Fetching all distfiles required by coin-or-alps-2.0.1_2 for building
===> Extracting for coin-or-alps-2.0.1_2
=> SHA256 Checksum OK for coin-or-CHiPPS-ALPS-releases-2.0.1_GH0.tar.gz.
===========================================================================
=======================<phase: patch-depends >============================
===========================================================================
=======================<phase: patch >============================
===> Patching for coin-or-alps-2.0.1_2
===> Applying FreeBSD patches for coin-or-alps-2.0.1_2 from /usr/ports/math/alps/files
===========================================================================
=======================<phase: build-depends >============================
===> coin-or-alps-2.0.1_2 depends on package: gmake>=4.3 - not found
===> Installing existing package /packages/All/gmake-4.3_2.pkg
[main-amd64-default-job-08] Installing gmake-4.3_2...
[main-amd64-default-job-08] `-- Installing gettext-runtime-0.21.1...
<snip>
checking whether we are using the GNU C compiler... yes
checking whether cc accepts -g... yes
checking for cc option to accept ANSI C... none needed
configure: C compiler options are: -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -DALPS_BUILD
checking whether we are using the GNU C++ compiler... yes
checking whether c++ accepts -g... yes
checking whether C++ compiler c++ works... yes
configure: C++ compiler options are: -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -DALPS_BUILD
checking for egrep... grep -E
checking whether ln -s works... yes
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for gawk... (cached) /usr/bin/awk
checking whether gmake sets $(MAKE)... yes
checking for style of include used by gmake... GNU
checking dependency style of cc... gcc3
checking dependency style of c++... gcc3
checking whether to enable maintainer-specific portions of Makefiles... no
configure: Using libtool script in directory ..
checking if library version is set... no
checking if user provides library for Mpi... no
checking pkg-config is at least version 0.16.0... yes
checking for COIN-OR package CoinUtils... yes: 2.11.9
checking for COIN-OR package Clp... not given: Package 'cgl', required by 'virtual:world', not found
Package 'osi-clp', required by 'virtual:world', not found
checking cmath usability... no
checking cmath presence... yes
configure: WARNING: cmath: present but cannot be compiled
configure: WARNING: cmath: check for missing prerequisite headers?
configure: WARNING: cmath: see the Autoconf documentation
configure: WARNING: cmath: section "Present But Cannot Be Compiled"
configure: WARNING: cmath: proceeding with the preprocessor's result
configure: WARNING: cmath: in the future, the compiler will take precedence
configure: WARNING: ## ---------------------------------------------------------------- ##
configure: WARNING: ## Report this to https://github.com/coin-or/CHiPPS-ALPS/issues/new ##
configure: WARNING: ## ---------------------------------------------------------------- ##
checking for cmath... yes
checking cfloat usability... no
checking cfloat presence... yes
configure: WARNING: cfloat: present but cannot be compiled
configure: WARNING: cfloat: check for missing prerequisite headers?
configure: WARNING: cfloat: see the Autoconf documentation
configure: WARNING: cfloat: section "Present But Cannot Be Compiled"
configure: WARNING: cfloat: proceeding with the preprocessor's result
configure: WARNING: cfloat: in the future, the compiler will take precedence
configure: WARNING: ## ---------------------------------------------------------------- ##
configure: WARNING: ## Report this to https://github.com/coin-or/CHiPPS-ALPS/issues/new ##
configure: WARNING: ## ---------------------------------------------------------------- ##
checking for cfloat... yes
checking cieeefp usability... no
checking cieeefp presence... no
checking for cieeefp... no
checking ieeefp.h usability... no
checking ieeefp.h presence... yes
configure: WARNING: ieeefp.h: present but cannot be compiled
configure: WARNING: ieeefp.h: check for missing prerequisite headers?
configure: WARNING: ieeefp.h: see the Autoconf documentation
configure: WARNING: ieeefp.h: section "Present But Cannot Be Compiled"
configure: WARNING: ieeefp.h: proceeding with the preprocessor's result
configure: WARNING: ieeefp.h: in the future, the compiler will take precedence
configure: WARNING: ## ---------------------------------------------------------------- ##
configure: WARNING: ## Report this to https://github.com/coin-or/CHiPPS-ALPS/issues/new ##
configure: WARNING: ## ---------------------------------------------------------------- ##
checking for ieeefp.h... yes
checking which command should be used to link input files... ln -s
configure: configuring doxygen documentation options
checking for doxygen... no
checking for latex... no
checking for dot... NO
checking for doxygen doc'n for CoinUtils ... /usr/local/share/coin/doc/CoinUtils/doxydoc (tag)
configure: creating ./config.status
config.status: creating Makefile
config.status: creating examples/Abc/Makefile
config.status: creating examples/Abc/abc.par
config.status: creating examples/Knap/Makefile
config.status: creating examples/Knap/knap.par
config.status: creating src/Makefile
config.status: creating test/Makefile
config.status: creating alps.pc
config.status: creating alps-uninstalled.pc
config.status: creating doxydoc/doxygen.conf
config.status: creating src/config.h
config.status: creating src/config_alps.h
config.status: linking ./examples/Abc/AbcBranchActual.cpp to test/AbcBranchActual.cpp
config.status: linking ./examples/Abc/AbcBranchActual.h to test/AbcBranchActual.h
config.status: linking ./examples/Abc/AbcBranchBase.cpp to test/AbcBranchBase.cpp
config.status: linking ./examples/Abc/AbcBranchBase.h to test/AbcBranchBase.h
config.status: linking ./examples/Abc/AbcCutGenerator.cpp to test/AbcCutGenerator.cpp
config.status: linking ./examples/Abc/AbcCutGenerator.h to test/AbcCutGenerator.h
config.status: linking ./examples/Abc/AbcHeuristic.cpp to test/AbcHeuristic.cpp
config.status: linking ./examples/Abc/AbcHeuristic.h to test/AbcHeuristic.h
config.status: linking ./examples/Abc/AbcMain.cpp to test/AbcMain.cpp
config.status: linking ./examples/Abc/AbcMessage.cpp to test/AbcMessage.cpp
config.status: linking ./examples/Abc/AbcMessage.h to test/AbcMessage.h
config.status: linking ./examples/Abc/AbcModel.cpp to test/AbcModel.cpp
config.status: linking ./examples/Abc/AbcModel.h to test/AbcModel.h
config.status: linking ./examples/Abc/AbcNodeDesc.h to test/AbcNodeDesc.h
config.status: linking ./examples/Abc/AbcParams.cpp to test/AbcParams.cpp
config.status: linking ./examples/Abc/AbcParams.h to test/AbcParams.h
config.status: linking ./examples/Abc/AbcSolution.cpp to test/AbcSolution.cpp
config.status: linking ./examples/Abc/AbcSolution.h to test/AbcSolution.h
config.status: linking ./examples/Abc/AbcTreeNode.cpp to test/AbcTreeNode.cpp
config.status: linking ./examples/Abc/AbcTreeNode.h to test/AbcTreeNode.h
config.status: executing depfiles commands
configure: In case of trouble, first consult the troubleshooting page at https://projects.coin-or.org/BuildTools/wiki/user-troubleshooting
configure: Configuration of Alps successful
configure: In case of trouble, first consult the troubleshooting page at https://projects.coin-or.org/BuildTools/wiki/user-troubleshooting
configure: Main configuration of Alps successful
===========================================================================
=======================<phase: build >============================
===> Building for coin-or-alps-2.0.1_2
gmake[1]: Entering directory '/wrkdirs/usr/ports/math/alps/work/CHiPPS-ALPS-releases-2.0.1'
Making all in Alps
gmake[2]: Entering directory '/wrkdirs/usr/ports/math/alps/work/CHiPPS-ALPS-releases-2.0.1/Alps'
Making all in src
gmake[3]: Entering directory '/wrkdirs/usr/ports/math/alps/work/CHiPPS-ALPS-releases-2.0.1/Alps/src'
gmake all-am
gmake[4]: Entering directory '/wrkdirs/usr/ports/math/alps/work/CHiPPS-ALPS-releases-2.0.1/Alps/src'
if /bin/sh ../../libtool --tag=CXX --mode=compile c++ -DHAVE_CONFIG_H -I. -I`echo .` -I/usr/local/include/coin -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -DALPS_BUILD -MT AlpsParameterBase.lo -MD -MP -MF ".deps/AlpsParameterBase.Tpo" -c -o AlpsParameterBase.lo AlpsParameterBase.cpp; \
then mv -f ".deps/AlpsParameterBase.Tpo" ".deps/AlpsParameterBase.Plo"; else rm -f ".deps/AlpsParameterBase.Tpo"; exit 1; fi
if /bin/sh ../../libtool --tag=CXX --mode=compile c++ -DHAVE_CONFIG_H -I. -I`echo .` -I/usr/local/include/coin -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -DALPS_BUILD -MT AlpsParams.lo -MD -MP -MF ".deps/AlpsParams.Tpo" -c -o AlpsParams.lo AlpsParams.cpp; \
then mv -f ".deps/AlpsParams.Tpo" ".deps/AlpsParams.Plo"; else rm -f ".deps/AlpsParams.Tpo"; exit 1; fi
mkdir .libs
c++ -DHAVE_CONFIG_H -I. -I. -I/usr/local/include/coin -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -DALPS_BUILD -MT AlpsParams.lo -MD -MP -MF .deps/AlpsParams.Tpo -c AlpsParams.cpp -fPIC -DPIC -o .libs/AlpsParams.o
c++ -DHAVE_CONFIG_H -I. -I. -I/usr/local/include/coin -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -DALPS_BUILD -MT AlpsParameterBase.lo -MD -MP -MF .deps/AlpsParameterBase.Tpo -c AlpsParameterBase.cpp -fPIC -DPIC -o .libs/AlpsParameterBase.o
if /bin/sh ../../libtool --tag=CXX --mode=compile c++ -DHAVE_CONFIG_H -I. -I`echo .` -I/usr/local/include/coin -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -DALPS_BUILD -MT AlpsMessage.lo -MD -MP -MF ".deps/AlpsMessage.Tpo" -c -o AlpsMessage.lo AlpsMessage.cpp; \
then mv -f ".deps/AlpsMessage.Tpo" ".deps/AlpsMessage.Plo"; else rm -f ".deps/AlpsMessage.Tpo"; exit 1; fi
if /bin/sh ../../libtool --tag=CXX --mode=compile c++ -DHAVE_CONFIG_H -I. -I`echo .` -I/usr/local/include/coin -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -DALPS_BUILD -MT AlpsKnowledge.lo -MD -MP -MF ".deps/AlpsKnowledge.Tpo" -c -o AlpsKnowledge.lo AlpsKnowledge.cpp; \
then mv -f ".deps/AlpsKnowledge.Tpo" ".deps/AlpsKnowledge.Plo"; else rm -f ".deps/AlpsKnowledge.Tpo"; exit 1; fi
c++ -DHAVE_CONFIG_H -I. -I. -I/usr/local/include/coin -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -DALPS_BUILD -MT AlpsMessage.lo -MD -MP -MF .deps/AlpsMessage.Tpo -c AlpsMessage.cpp -fPIC -DPIC -o .libs/AlpsMessage.o
c++ -DHAVE_CONFIG_H -I. -I. -I/usr/local/include/coin -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -DALPS_BUILD -MT AlpsKnowledge.lo -MD -MP -MF .deps/AlpsKnowledge.Tpo -c AlpsKnowledge.cpp -fPIC -DPIC -o .libs/AlpsKnowledge.o
if /bin/sh ../../libtool --tag=CXX --mode=compile c++ -DHAVE_CONFIG_H -I. -I`echo .` -I/usr/local/include/coin -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -DALPS_BUILD -MT AlpsTreeNode.lo -MD -MP -MF ".deps/AlpsTreeNode.Tpo" -c -o AlpsTreeNode.lo AlpsTreeNode.cpp; \
then mv -f ".deps/AlpsTreeNode.Tpo" ".deps/AlpsTreeNode.Plo"; else rm -f ".deps/AlpsTreeNode.Tpo"; exit 1; fi
In file included from AlpsKnowledge.cpp:27:
In file included from ./AlpsKnowledge.h:35:
./AlpsEncoded.h:203:41: warning: source of this 'memcpy' call is a pointer to dynamic class 'AlpsKnowledge'; vtable pointer will be copied [-Wdynamic-class-memaccess]
memcpy(representation_ + size_, &value, sizeof(T));
~~~~~~ ^
AlpsKnowledge.cpp:43:12: note: in instantiation of function template specialization 'AlpsEncoded::writeRep<AlpsKnowledge>' requested here
encoded->writeRep(*this);
^
./AlpsEncoded.h:203:41: note: explicitly cast the pointer to silence this warning
memcpy(representation_ + size_, &value, sizeof(T));
^
(void*)
./AlpsEncoded.h:218:16: warning: destination for this 'memcpy' call is a pointer to dynamic class 'AlpsKnowledge'; vtable pointer will be overwritten [-Wdynamic-class-memaccess]
memcpy(&value, representation_ + pos_, sizeof(T));
~~~~~~ ^
AlpsKnowledge.cpp:48:11: note: in instantiation of function template specialization 'AlpsEncoded::readRep<AlpsKnowledge>' requested here
encoded.readRep(*this);
^
./AlpsEncoded.h:218:16: note: explicitly cast the pointer to silence this warning
memcpy(&value, representation_ + pos_, sizeof(T));
^
(void*)
2 warnings generated.
c++ -DHAVE_CONFIG_H -I. -I. -I/usr/local/include/coin -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -DALPS_BUILD -MT AlpsTreeNode.lo -MD -MP -MF .deps/AlpsTreeNode.Tpo -c AlpsTreeNode.cpp -fPIC -DPIC -o .libs/AlpsTreeNode.o
if /bin/sh ../../libtool --tag=CXX --mode=compile c++ -DHAVE_CONFIG_H -I. -I`echo .` -I/usr/local/include/coin -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -DALPS_BUILD -MT AlpsNodePool.lo -MD -MP -MF ".deps/AlpsNodePool.Tpo" -c -o AlpsNodePool.lo AlpsNodePool.cpp; \
then mv -f ".deps/AlpsNodePool.Tpo" ".deps/AlpsNodePool.Plo"; else rm -f ".deps/AlpsNodePool.Tpo"; exit 1; fi
c++ -DHAVE_CONFIG_H -I. -I. -I/usr/local/include/coin -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -DALPS_BUILD -MT AlpsNodePool.lo -MD -MP -MF .deps/AlpsNodePool.Tpo -c AlpsNodePool.cpp -fPIC -DPIC -o .libs/AlpsNodePool.o
In file included from AlpsTreeNode.cpp:29:
In file included from ./AlpsKnowledgeBroker.h:37:
In file included from ./AlpsSearchStrategy.h:31:
In file included from ./AlpsSubTree.h:38:
In file included from ./AlpsNodePool.h:32:
./AlpsHelperFunctions.h:42:35: error: no template named 'unary_function' in namespace 'std'; did you mean '__unary_function'?
class TotalWorkload : public std::unary_function<AlpsTreeNode*, void> {
~~~~~^~~~~~~~~~~~~~
__unary_function
/usr/include/c++/v1/__functional/unary_function.h:46:1: note: '__unary_function' declared here
using __unary_function = __unary_function_keep_layout_base<_Arg, _Result>;
^
In file included from AlpsNodePool.cpp:27:
In file included from ./AlpsNodePool.h:32:
./AlpsHelperFunctions.h:42:35: error: no template named 'unary_function' in namespace 'std'; did you mean '__unary_function'?
class TotalWorkload : public std::unary_function<AlpsTreeNode*, void> {
~~~~~^~~~~~~~~~~~~~
__unary_function
/usr/include/c++/v1/__functional/unary_function.h:46:1: note: '__unary_function' declared here
using __unary_function = __unary_function_keep_layout_base<_Arg, _Result>;
^
1 error generated.
gmake[4]: *** [Makefile:541: AlpsNodePool.lo] Error 1
gmake[4]: *** Waiting for unfinished jobs....
1 error generated.
gmake[4]: *** [Makefile:541: AlpsTreeNode.lo] Error 1
gmake[4]: Leaving directory '/wrkdirs/usr/ports/math/alps/work/CHiPPS-ALPS-releases-2.0.1/Alps/src'
gmake[3]: *** [Makefile:415: all] Error 2
gmake[3]: Leaving directory '/wrkdirs/usr/ports/math/alps/work/CHiPPS-ALPS-releases-2.0.1/Alps/src'
gmake[2]: *** [Makefile:481: all-recursive] Error 1
gmake[2]: Leaving directory '/wrkdirs/usr/ports/math/alps/work/CHiPPS-ALPS-releases-2.0.1/Alps'
gmake[1]: *** [Makefile:328: all-recursive] Error 1
gmake[1]: Leaving directory '/wrkdirs/usr/ports/math/alps/work/CHiPPS-ALPS-releases-2.0.1'
===> Compilation failed unexpectedly.
Try to set MAKE_JOBS_UNSAFE=yes and rebuild before reporting the failure to
the maintainer.
*** Error code 1
Stop.
make: stopped in /usr/ports/math/alps