[package - main-armv6-default][science/hdf5-18] Failed for hdf5-18-1.8.21_4 in build

From: <pkg-fallout_at_FreeBSD.org>
Date: Sun, 26 Feb 2023 05:05:20 UTC
You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer:     thierry@FreeBSD.org
Log URL:        https://pkg-status.freebsd.org/beefy8/data/main-armv6-default/pc3dd65404e10_s429ba161fb/logs/hdf5-18-1.8.21_4.log
Build URL:      https://pkg-status.freebsd.org/beefy8/build.html?mastername=main-armv6-default&build=pc3dd65404e10_s429ba161fb
Log:

=>> Building science/hdf5-18
build started at Sun Feb 26 05:04:39 UTC 2023
port directory: /usr/ports/science/hdf5-18
package name: hdf5-18-1.8.21_4
building for: FreeBSD main-armv6-default-job-05 14.0-CURRENT FreeBSD 14.0-CURRENT 1400081 arm
maintained by: thierry@FreeBSD.org
Makefile ident: 
Poudriere version: 3.2.8-23-ga7f8d188
Host OSVERSION: 1400078
Jail OSVERSION: 1400081
Job Id: 05




!!! Jail is newer than host. (Jail: 1400081, Host: 1400078) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



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=======================<phase: check-sanity   >============================
===>  License BSD4CLAUSE accepted by the user
===========================================================================
=======================<phase: pkg-depends    >============================
===>   hdf5-18-1.8.21_4 depends on file: /usr/local/sbin/pkg - not found
===>   Installing existing package /packages/All/pkg-1.19.1_1.pkg
[main-armv6-default-job-05] Installing pkg-1.19.1_1...
[main-armv6-default-job-05] Extracting pkg-1.19.1_1: .......... done
===>   hdf5-18-1.8.21_4 depends on file: /usr/local/sbin/pkg - found
===>   Returning to build of hdf5-18-1.8.21_4
<snip>
config.status: creating examples/testh5cc.sh
config.status: creating c++/Makefile
config.status: creating c++/src/Makefile
config.status: creating c++/src/h5c++
config.status: creating c++/test/Makefile
config.status: creating c++/test/H5srcdir_str.h
config.status: creating c++/examples/Makefile
config.status: creating c++/examples/run-c++-ex.sh
config.status: creating c++/examples/testh5c++.sh
config.status: creating fortran/Makefile
config.status: creating fortran/src/h5fc
config.status: creating fortran/src/Makefile
config.status: creating fortran/test/Makefile
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config.status: creating fortran/examples/Makefile
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config.status: creating fortran/examples/testh5fc.sh
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config.status: creating hl/examples/Makefile
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config.status: creating hl/c++/src/Makefile
config.status: creating hl/c++/test/Makefile
config.status: creating hl/c++/examples/Makefile
config.status: creating hl/c++/examples/run-hlc++-ex.sh
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config.status: creating hl/fortran/examples/Makefile
config.status: creating hl/fortran/examples/run-hlfortran-ex.sh
config.status: creating src/H5config.h
config.status: executing pubconf commands
creating src/H5pubconf.h
Post process src/libhdf5.settings
config.status: executing depfiles commands
config.status: executing libtool commands
	    SUMMARY OF THE HDF5 CONFIGURATION
	    =================================

General Information:
-------------------
		   HDF5 Version: 1.8.21
		  Configured on: Sun Feb 26 05:05:03 UTC 2023
		  Configured by: root@main-armv6-default-job-05
		 Configure mode: production
		    Host system: armv6-portbld-freebsd14.0
	      Uname information: FreeBSD main-armv6-default-job-05 14.0-CURRENT FreeBSD 14.0-CURRENT 1400081 arm
		       Byte sex: little-endian
		      Libraries: static, shared
	     Installation point: /usr/local

Compiling Options:
------------------
               Compilation Mode: production
                     C Compiler: /nxb-bin/usr/bin/cc
                         CFLAGS: -O2 -pipe  -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing 
                      H5_CFLAGS:  
                      AM_CFLAGS: 
                       CPPFLAGS: -isystem /usr/local/include
                    H5_CPPFLAGS:   -DNDEBUG -UH5_DEBUG_API
                    AM_CPPFLAGS:  -I/usr/include
               Shared C Library: yes
               Static C Library: yes
  Statically Linked Executables: no
                        LDFLAGS:  -fstack-protector-strong 
                     H5_LDFLAGS: 
                     AM_LDFLAGS:  -L/usr/lib
 	 	Extra libraries: -lz -ldl -lm -L/usr/local/lib
 		       Archiver: ar
 		 	 Ranlib: ranlib
 	      Debugged Packages: 
		    API Tracing: no

Languages:
----------
                        Fortran: no

                            C++: yes
                   C++ Compiler: /nxb-bin/usr/bin/c++
                      C++ Flags: -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing  -isystem /usr/local/include 
                   H5 C++ Flags:  
                   AM C++ Flags: 
             Shared C++ Library: yes
             Static C++ Library: yes

Features:
---------
                  Parallel HDF5: no
             High Level library: yes
                   Threadsafety: no
            Default API Mapping: v18
 With Deprecated Public Symbols: yes
         I/O filters (external): deflate(zlib)
                            MPE: no
                     Direct VFD: no
                        dmalloc: no
Clear file buffers before write: yes
           Using memory checker: no
         Function Stack Tracing: no
      Strict File Format Checks: yes
   Optimization Instrumentation: yes
cp -f -p /wrkdirs/usr/ports/science/hdf5-18/work/hdf5-1.8.21/src/libhdf5.settings.in	 /wrkdirs/usr/ports/science/hdf5-18/work/hdf5-1.8.21/src/libhdf5-18.settings.in
cp -f -p /wrkdirs/usr/ports/science/hdf5-18/work/hdf5-1.8.21/src/libhdf5.settings		 /wrkdirs/usr/ports/science/hdf5-18/work/hdf5-1.8.21/src/libhdf5-18.settings
===========================================================================
=======================<phase: build          >============================
===>  Building for hdf5-18-1.8.21_4
Making all in src
/nxb-bin/usr/bin/make  all-am
/bin/sh ../libtool  --tag=CC    --mode=compile /nxb-bin/usr/bin/cc -DHAVE_CONFIG_H  -I.  -I/usr/include   -DNDEBUG -UH5_DEBUG_API -isystem /usr/local/include   -O2 -pipe  -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -MT H5.lo -MD -MP -MF .deps/H5.Tpo -c -o H5.lo H5.c
libtool: compile:  /nxb-bin/usr/bin/cc -DHAVE_CONFIG_H -I. -I/usr/include -DNDEBUG -UH5_DEBUG_API -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -MT H5.lo -MD -MP -MF .deps/H5.Tpo -c H5.c  -fPIC -DPIC -o .libs/H5.o
libtool: compile:  /nxb-bin/usr/bin/cc -DHAVE_CONFIG_H -I. -I/usr/include -DNDEBUG -UH5_DEBUG_API -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -MT H5.lo -MD -MP -MF .deps/H5.Tpo -c H5.c -o H5.o >/dev/null 2>&1
mv -f .deps/H5.Tpo .deps/H5.Plo
/bin/sh ../libtool  --tag=CC    --mode=compile /nxb-bin/usr/bin/cc -DHAVE_CONFIG_H  -I.  -I/usr/include   -DNDEBUG -UH5_DEBUG_API -isystem /usr/local/include   -O2 -pipe  -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -MT H5checksum.lo -MD -MP -MF .deps/H5checksum.Tpo -c -o H5checksum.lo H5checksum.c
libtool: compile:  /nxb-bin/usr/bin/cc -DHAVE_CONFIG_H -I. -I/usr/include -DNDEBUG -UH5_DEBUG_API -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -MT H5checksum.lo -MD -MP -MF .deps/H5checksum.Tpo -c H5checksum.c  -fPIC -DPIC -o .libs/H5checksum.o
libtool: compile:  /nxb-bin/usr/bin/cc -DHAVE_CONFIG_H -I. -I/usr/include -DNDEBUG -UH5_DEBUG_API -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -MT H5checksum.lo -MD -MP -MF .deps/H5checksum.Tpo -c H5checksum.c -o H5checksum.o >/dev/null 2>&1
mv -f .deps/H5checksum.Tpo .deps/H5checksum.Plo
/bin/sh ../libtool  --tag=CC    --mode=compile /nxb-bin/usr/bin/cc -DHAVE_CONFIG_H  -I.  -I/usr/include   -DNDEBUG -UH5_DEBUG_API -isystem /usr/local/include   -O2 -pipe  -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -MT H5dbg.lo -MD -MP -MF .deps/H5dbg.Tpo -c -o H5dbg.lo H5dbg.c
libtool: compile:  /nxb-bin/usr/bin/cc -DHAVE_CONFIG_H -I. -I/usr/include -DNDEBUG -UH5_DEBUG_API -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -MT H5dbg.lo -MD -MP -MF .deps/H5dbg.Tpo -c H5dbg.c  -fPIC -DPIC -o .libs/H5dbg.o
libtool: compile:  /nxb-bin/usr/bin/cc -DHAVE_CONFIG_H -I. -I/usr/include -DNDEBUG -UH5_DEBUG_API -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -MT H5dbg.lo -MD -MP -MF .deps/H5dbg.Tpo -c H5dbg.c -o H5dbg.o >/dev/null 2>&1
mv -f .deps/H5dbg.Tpo .deps/H5dbg.Plo
/bin/sh ../libtool  --tag=CC    --mode=compile /nxb-bin/usr/bin/cc -DHAVE_CONFIG_H  -I.  -I/usr/include   -DNDEBUG -UH5_DEBUG_API -isystem /usr/local/include   -O2 -pipe  -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -MT H5system.lo -MD -MP -MF .deps/H5system.Tpo -c -o H5system.lo H5system.c
libtool: compile:  /nxb-bin/usr/bin/cc -DHAVE_CONFIG_H -I. -I/usr/include -DNDEBUG -UH5_DEBUG_API -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -MT H5system.lo -MD -MP -MF .deps/H5system.Tpo -c H5system.c  -fPIC -DPIC -o .libs/H5system.o
libtool: compile:  /nxb-bin/usr/bin/cc -DHAVE_CONFIG_H -I. -I/usr/include -DNDEBUG -UH5_DEBUG_API -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -MT H5system.lo -MD -MP -MF .deps/H5system.Tpo -c H5system.c -o H5system.o >/dev/null 2>&1
mv -f .deps/H5system.Tpo .deps/H5system.Plo
/bin/sh ../libtool  --tag=CC    --mode=compile /nxb-bin/usr/bin/cc -DHAVE_CONFIG_H  -I.  -I/usr/include   -DNDEBUG -UH5_DEBUG_API -isystem /usr/local/include   -O2 -pipe  -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -MT H5timer.lo -MD -MP -MF .deps/H5timer.Tpo -c -o H5timer.lo H5timer.c
libtool: compile:  /nxb-bin/usr/bin/cc -DHAVE_CONFIG_H -I. -I/usr/include -DNDEBUG -UH5_DEBUG_API -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -MT H5timer.lo -MD -MP -MF .deps/H5timer.Tpo -c H5timer.c  -fPIC -DPIC -o .libs/H5timer.o
libtool: compile:  /nxb-bin/usr/bin/cc -DHAVE_CONFIG_H -I. -I/usr/include -DNDEBUG -UH5_DEBUG_API -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -MT H5timer.lo -MD -MP -MF .deps/H5timer.Tpo -c H5timer.c -o H5timer.o >/dev/null 2>&1
mv -f .deps/H5timer.Tpo .deps/H5timer.Plo
/bin/sh ../libtool  --tag=CC    --mode=compile /nxb-bin/usr/bin/cc -DHAVE_CONFIG_H  -I.  -I/usr/include   -DNDEBUG -UH5_DEBUG_API -isystem /usr/local/include   -O2 -pipe  -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -MT H5trace.lo -MD -MP -MF .deps/H5trace.Tpo -c -o H5trace.lo H5trace.c
libtool: compile:  /nxb-bin/usr/bin/cc -DHAVE_CONFIG_H -I. -I/usr/include -DNDEBUG -UH5_DEBUG_API -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -MT H5trace.lo -MD -MP -MF .deps/H5trace.Tpo -c H5trace.c  -fPIC -DPIC -o .libs/H5trace.o
libtool: compile:  /nxb-bin/usr/bin/cc -DHAVE_CONFIG_H -I. -I/usr/include -DNDEBUG -UH5_DEBUG_API -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -MT H5trace.lo -MD -MP -MF .deps/H5trace.Tpo -c H5trace.c -o H5trace.o >/dev/null 2>&1
mv -f .deps/H5trace.Tpo .deps/H5trace.Plo
/bin/sh ../libtool  --tag=CC    --mode=compile /nxb-bin/usr/bin/cc -DHAVE_CONFIG_H  -I.  -I/usr/include   -DNDEBUG -UH5_DEBUG_API -isystem /usr/local/include   -O2 -pipe  -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -MT H5A.lo -MD -MP -MF .deps/H5A.Tpo -c -o H5A.lo H5A.c
libtool: compile:  /nxb-bin/usr/bin/cc -DHAVE_CONFIG_H -I. -I/usr/include -DNDEBUG -UH5_DEBUG_API -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -MT H5A.lo -MD -MP -MF .deps/H5A.Tpo -c H5A.c  -fPIC -DPIC -o .libs/H5A.o
libtool: compile:  /nxb-bin/usr/bin/cc -DHAVE_CONFIG_H -I. -I/usr/include -DNDEBUG -UH5_DEBUG_API -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -MT H5A.lo -MD -MP -MF .deps/H5A.Tpo -c H5A.c -o H5A.o >/dev/null 2>&1
mv -f .deps/H5A.Tpo .deps/H5A.Plo
/bin/sh ../libtool  --tag=CC    --mode=compile /nxb-bin/usr/bin/cc -DHAVE_CONFIG_H  -I.  -I/usr/include   -DNDEBUG -UH5_DEBUG_API -isystem /usr/local/include   -O2 -pipe  -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -MT H5Abtree2.lo -MD -MP -MF .deps/H5Abtree2.Tpo -c -o H5Abtree2.lo H5Abtree2.c
libtool: compile:  /nxb-bin/usr/bin/cc -DHAVE_CONFIG_H -I. -I/usr/include -DNDEBUG -UH5_DEBUG_API -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -MT H5Abtree2.lo -MD -MP -MF .deps/H5Abtree2.Tpo -c H5Abtree2.c  -fPIC -DPIC -o .libs/H5Abtree2.o
libtool: compile:  /nxb-bin/usr/bin/cc -DHAVE_CONFIG_H -I. -I/usr/include -DNDEBUG -UH5_DEBUG_API -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -MT H5Abtree2.lo -MD -MP -MF .deps/H5Abtree2.Tpo -c H5Abtree2.c -o H5Abtree2.o >/dev/null 2>&1
mv -f .deps/H5Abtree2.Tpo .deps/H5Abtree2.Plo
/bin/sh ../libtool  --tag=CC    --mode=compile /nxb-bin/usr/bin/cc -DHAVE_CONFIG_H  -I.  -I/usr/include   -DNDEBUG -UH5_DEBUG_API -isystem /usr/local/include   -O2 -pipe  -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -MT H5Adense.lo -MD -MP -MF .deps/H5Adense.Tpo -c -o H5Adense.lo H5Adense.c
libtool: compile:  /nxb-bin/usr/bin/cc -DHAVE_CONFIG_H -I. -I/usr/include -DNDEBUG -UH5_DEBUG_API -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -MT H5Adense.lo -MD -MP -MF .deps/H5Adense.Tpo -c H5Adense.c  -fPIC -DPIC -o .libs/H5Adense.o
libtool: compile:  /nxb-bin/usr/bin/cc -DHAVE_CONFIG_H -I. -I/usr/include -DNDEBUG -UH5_DEBUG_API -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -MT H5Adense.lo -MD -MP -MF .deps/H5Adense.Tpo -c H5Adense.c -o H5Adense.o >/dev/null 2>&1
mv -f .deps/H5Adense.Tpo .deps/H5Adense.Plo
/bin/sh ../libtool  --tag=CC    --mode=compile /nxb-bin/usr/bin/cc -DHAVE_CONFIG_H  -I.  -I/usr/include   -DNDEBUG -UH5_DEBUG_API -isystem /usr/local/include   -O2 -pipe  -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -MT H5Adeprec.lo -MD -MP -MF .deps/H5Adeprec.Tpo -c -o H5Adeprec.lo H5Adeprec.c
libtool: compile:  /nxb-bin/usr/bin/cc -DHAVE_CONFIG_H -I. -I/usr/include -DNDEBUG -UH5_DEBUG_API -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -MT H5Adeprec.lo -MD -MP -MF .deps/H5Adeprec.Tpo -c H5Adeprec.c  -fPIC -DPIC -o .libs/H5Adeprec.o
libtool: compile:  /nxb-bin/usr/bin/cc -DHAVE_CONFIG_H -I. -I/usr/include -DNDEBUG -UH5_DEBUG_API -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -MT H5Adeprec.lo -MD -MP -MF .deps/H5Adeprec.Tpo -c H5Adeprec.c -o H5Adeprec.o >/dev/null 2>&1
mv -f .deps/H5Adeprec.Tpo .deps/H5Adeprec.Plo
/bin/sh ../libtool  --tag=CC    --mode=compile /nxb-bin/usr/bin/cc -DHAVE_CONFIG_H  -I.  -I/usr/include   -DNDEBUG -UH5_DEBUG_API -isystem /usr/local/include   -O2 -pipe  -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -MT H5Aint.lo -MD -MP -MF .deps/H5Aint.Tpo -c -o H5Aint.lo H5Aint.c
libtool: compile:  /nxb-bin/usr/bin/cc -DHAVE_CONFIG_H -I. -I/usr/include -DNDEBUG -UH5_DEBUG_API -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -MT H5Aint.lo -MD -MP -MF .deps/H5Aint.Tpo -c H5Aint.c  -fPIC -DPIC -o .libs/H5Aint.o
H5Aint.c:200:45: warning: passing 'const H5T_t *' (aka 'const struct H5T_t *') to parameter of type 'H5T_t *' (aka 'struct H5T_t *') discards qualifiers [-Wincompatible-pointer-types-discards-qualifiers]
    if(NULL == (attr->shared->dt = H5T_copy(type, H5T_COPY_ALL)))
                                            ^~~~
./H5Tprivate.h:107:31: note: passing argument to parameter 'old_dt' here
H5_DLL H5T_t *H5T_copy(H5T_t *old_dt, H5T_copy_t method);
                              ^
H5Aint.c:532:62: warning: passing 'const H5T_t *' (aka 'const struct H5T_t *') to parameter of type 'H5T_t *' (aka 'struct H5T_t *') discards qualifiers [-Wincompatible-pointer-types-discards-qualifiers]
            if((src_id = H5I_register(H5I_DATATYPE, H5T_copy(mem_type, H5T_COPY_ALL), FALSE)) < 0 ||
                                                             ^~~~~~~~
./H5Tprivate.h:107:31: note: passing argument to parameter 'old_dt' here
H5_DLL H5T_t *H5T_copy(H5T_t *old_dt, H5T_copy_t method);
                              ^
H5Aint.c:649:71: warning: passing 'const H5T_t *' (aka 'const struct H5T_t *') to parameter of type 'H5T_t *' (aka 'struct H5T_t *') discards qualifiers [-Wincompatible-pointer-types-discards-qualifiers]
                        (dst_id = H5I_register(H5I_DATATYPE, H5T_copy(mem_type, H5T_COPY_ALL), FALSE)) < 0)
                                                                      ^~~~~~~~
./H5Tprivate.h:107:31: note: passing argument to parameter 'old_dt' here
H5_DLL H5T_t *H5T_copy(H5T_t *old_dt, H5T_copy_t method);
                              ^
H5Aint.c:2102:21: error: incompatible integer to pointer conversion assigning to 'H5A_t *' (aka 'struct H5A_t *') from 'int' [-Wint-conversion]
                    HGOTO_ERROR(H5E_ATTR, H5E_CANTALLOC, FAIL, "memory allocation failed")
                    ^                                    ~~~~
./H5Eprivate.h:67:4: note: expanded from macro 'HGOTO_ERROR'
   HGOTO_DONE(ret_val)                                                        \
   ^          ~~~~~~~
./H5Eprivate.h:76:40: note: expanded from macro 'HGOTO_DONE'
#define HGOTO_DONE(ret_val) {ret_value = ret_val; goto done;}
                                       ^ ~~~~~~~
3 warnings and 1 error generated.
*** Error code 1

Stop.
make[3]: stopped in /wrkdirs/usr/ports/science/hdf5-18/work/hdf5-1.8.21/src
*** Error code 1

Stop.
make[2]: stopped in /wrkdirs/usr/ports/science/hdf5-18/work/hdf5-1.8.21/src
*** Error code 1

Stop.
make[1]: stopped in /wrkdirs/usr/ports/science/hdf5-18/work/hdf5-1.8.21
*** Error code 1

Stop.
make: stopped in /usr/ports/science/hdf5-18