From nobody Wed Feb 22 19:35:59 2023 X-Original-To: pkg-fallout@mlmmj.nyi.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2610:1c1:1:606c::19:1]) by mlmmj.nyi.freebsd.org (Postfix) with ESMTP id 4PMRGS3hGJz3s616 for ; Wed, 22 Feb 2023 19:36:00 +0000 (UTC) (envelope-from pkg-fallout@FreeBSD.org) Received: from mxrelay.nyi.freebsd.org (mxrelay.nyi.freebsd.org [IPv6:2610:1c1:1:606c::19:3]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (4096 bits) server-digest SHA256 client-signature RSA-PSS (4096 bits) client-digest SHA256) (Client CN "mxrelay.nyi.freebsd.org", Issuer "R3" (verified OK)) by mx1.freebsd.org (Postfix) with ESMTPS id 4PMRGS03Tyz4QV9 for ; Wed, 22 Feb 2023 19:36:00 +0000 (UTC) (envelope-from pkg-fallout@FreeBSD.org) ARC-Message-Signature: i=1; a=rsa-sha256; c=relaxed/relaxed; d=freebsd.org; s=dkim; t=1677094560; h=from:from:reply-to:subject:subject:date:date:message-id:message-id: to:to:cc; bh=4qgimK/A7b4S/5qoh8fa6JhgMCm1nIfqu9rczWRP30Q=; b=eto2QCwH17Tn2p/Mn0YXg/+zTT4hwlfzw2Zktijjt66RwJmImYJF3XFe2N41iiab007Wrl UP26CdMulHY/mFBsLTj4yvUxGxiHziD8Rjqh08toUdkOubjlgP/hXWpiZTPYwi1eMGzuRz B8l4xn/X6waWPSrokIWBB+OIMwoKLNWID/4me8s4socqnT1byIG9MLgEKSRJxAe7gCbMeo q4j99xwoB3mp6DzSLlydsmTH/me+euqVUlVf2qWxr+l/zuvBDq6/ExzOa9SyF7FIFDpqRz V8ykzd0xqHHMcefDR8pdIrsvHFlZ1Ri5iH5blDC5Ltf//XJwpUm/I7S70qPjPA== ARC-Authentication-Results: i=1; mx1.freebsd.org; none ARC-Seal: i=1; s=dkim; d=freebsd.org; t=1677094560; a=rsa-sha256; cv=none; b=G5NcI+UUgJIAyHdepXGLQIkZpcIfeGaFqfWQy9NP2xQn5me3LoLg6IAnJuhDxOlvLGzW8L 4i6dC1yH5YnXJd4vwqVOqVNm/hO3nVCC99Wy4azUj7IgvKOip7IVdRVxI6HdDJCb13meeB H9aQyNIVRHI3gwRbjyL4TAtXzWtTJmazyBX0GGLwBTnZeGEon7qBOpuZ6ljc9UtNlXtg7T ZI8rGiZiNQMSEb2MuJ0mzPRPb8wEamdCQapKUxQ5R3UKhKRrG01UWaqT6hvQRwLssDvhDr tlIZ+q6onidXN0BeP1ARZEC1l5GeF5UmCr+FmibUq9qVhMi9cPzESwD53DOgSQ== Received: from foul1.nyi.freebsd.org (foul1.nyi.freebsd.org [IPv6:2610:1c1:1:6080::16:25]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (4096 bits) server-digest SHA256) (Client did not present a certificate) by mxrelay.nyi.freebsd.org (Postfix) with ESMTPS id 4PMRGR5xDjz1CRh for ; Wed, 22 Feb 2023 19:35:59 +0000 (UTC) (envelope-from pkg-fallout@FreeBSD.org) Received: from foul1.nyi.freebsd.org (localhost [127.0.0.1]) by foul1.nyi.freebsd.org (8.16.1/8.16.1) with ESMTP id 31MJZxNn058177 for ; Wed, 22 Feb 2023 19:35:59 GMT (envelope-from pkg-fallout@FreeBSD.org) Received: (from root@localhost) by foul1.nyi.freebsd.org (8.16.1/8.16.1/Submit) id 31MJZxGQ058168; Wed, 22 Feb 2023 19:35:59 GMT (envelope-from pkg-fallout@FreeBSD.org) Date: Wed, 22 Feb 2023 19:35:59 GMT From: pkg-fallout@FreeBSD.org Message-Id: <202302221935.31MJZxGQ058168@foul1.nyi.freebsd.org> To: pkg-fallout@FreeBSD.org Subject: [package - main-powerpc64-default][graphics/R-cran-rgdal] Failed for R-cran-rgdal-1.5.32_3 in stage X-ThisMailContainsUnwantedMimeParts: N List-Id: Fallout logs from package building List-Archive: https://lists.freebsd.org/archives/freebsd-pkg-fallout List-Help: List-Post: List-Subscribe: List-Unsubscribe: Sender: owner-freebsd-pkg-fallout@freebsd.org You are receiving this mail as a port that you maintain is failing to build on the FreeBSD package build server. Please investigate the failure and submit a PR to fix build. Maintainer: tota@FreeBSD.org Log URL: https://pkg-status.freebsd.org/foul1/data/main-powerpc64-default/pb64d2f1e5acf_sc92790b3fb/logs/R-cran-rgdal-1.5.32_3.log Build URL: https://pkg-status.freebsd.org/foul1/build.html?mastername=main-powerpc64-default&build=pb64d2f1e5acf_sc92790b3fb Log: =>> Building graphics/R-cran-rgdal build started at Wed Feb 22 19:34:58 UTC 2023 port directory: /usr/ports/graphics/R-cran-rgdal package name: R-cran-rgdal-1.5.32_3 building for: FreeBSD main-powerpc64-default-job-07 14.0-CURRENT FreeBSD 14.0-CURRENT 1400079 powerpc maintained by: tota@FreeBSD.org Makefile ident: Poudriere version: 3.2.8-23-ga7f8d188 Host OSVERSION: 1400073 Jail OSVERSION: 1400079 Job Id: 07 !!! Jail is newer than host. (Jail: 1400079, Host: 1400073) !!! !!! This is not supported. !!! !!! Host kernel must be same or newer than jail. !!! !!! Expect build failures. !!! ---Begin Environment--- SHELL=/bin/sh OSVERSION=1400079 UNAME_v=FreeBSD 14.0-CURRENT 1400079 UNAME_r=14.0-CURRENT BLOCKSIZE=K MAIL=/var/mail/root MM_CHARSET=UTF-8 LANG=C.UTF-8 STATUS=1 HOME=/root PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin LOCALBASE=/usr/local USER=root LIBEXECPREFIX=/usr/local/libexec/poudriere POUDRIERE_VERSION=3.2.8-23-ga7f8d188 MASTERMNT=/usr/local/poudriere/data/.m/main-powerpc64-default/ref POUDRIERE_BUILD_TYPE=bulk PACKAGE_BUILDING=yes SAVED_TERM= PWD=/usr/local/poudriere/data/.m/main-powerpc64-default/ref/.p/pool P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS MASTERNAME=main-powerpc64-default SCRIPTPREFIX=/usr/local/share/poudriere OLDPWD=/usr/local/poudriere/data/.m/main-powerpc64-default/ref/.p SCRIPTPATH=/usr/local/share/poudriere/bulk.sh POUDRIEREPATH=/usr/local/bin/poudriere ---End Environment--- ---Begin Poudriere Port Flags/Env--- PORT_FLAGS= PKGENV= FLAVOR= DEPENDS_ARGS= MAKE_ARGS= ---End Poudriere Port Flags/Env--- ---Begin OPTIONS List--- ---End OPTIONS List--- --MAINTAINER-- tota@FreeBSD.org --End MAINTAINER-- --CONFIGURE_ARGS-- --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- F77="gfortran12" F90="gfortran12" FC="gfortran12" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc12" F90FLAGS="-O -Wl,-rpath=/usr/local/lib/gcc12" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc12" PKG_CONFIG=pkgconf XDG_DATA_HOME=/wrkdirs/usr/ports/graphics/R-cran-rgdal/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/graphics/R-cran-rgdal/work XDG_CACHE_HOME=/wrkdirs/usr/ports/graphics/R-cran-rgdal/work/.cache HOME=/wrkdirs/usr/ports/graphics/R-cran-rgdal/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/graphics/R-cran-rgdal/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/graphics/R-cran-rgdal/work/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig SHELL=/bin/sh CONFIG_SHELL=/bin/sh --End CONFIGURE_ENV-- --MAKE_ENV-- F77="gfortran12" F90="gfortran12" FC="gfortran12" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc12" F90FLAGS="-O -Wl,-rpath=/usr/local/lib/gcc12" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc12" XDG_DATA_HOME=/wrkdirs/usr/ports/graphics/R-cran-rgdal/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/graphics/R-cran-rgdal/work XDG_CACHE_HOME=/wrkdirs/usr/ports/graphics/R-cran-rgdal/work/.cache HOME=/wrkdirs/usr/ports/graphics/R-cran-rgdal/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/graphics/R-cran-rgdal/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/graphics/R-cran-rgdal/work/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES ADDR2LINE="/usr/local/bin/addr2line" AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" OBJCOPY="/usr/local/ bin/objcopy" OBJDUMP="/usr/local/bin/objdump" RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" PREFIX=/usr/local LOCALBASE=/usr/local CC="cc" CFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " CPP="cpp" CPPFLAGS="" LDFLAGS=" -Wl,-rpath=/usr/local/lib/gcc12 -L/usr/local/lib/gcc12 -B/usr/local/bin -fstack-protector-strong " LIBS="" CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" --End MAKE_ENV-- --PLIST_SUB-- R_MOD_DIR=lib/R/library/rgdal OSREL=14.0 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/rgdal" EXAMPLESDIR="share/examples/rgdal" DATADIR="share/rgdal" WWWDIR="www/rgdal" ETCDIR="etc/rgdal" --End PLIST_SUB-- --SUB_LIST-- PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/rgdal DOCSDIR=/usr/local/share/doc/rgdal EXAMPLESDIR=/usr/local/share/examples/rgdal WWWDIR=/usr/local/www/rgdal ETCDIR=/usr/local/etc/rgdal --End SUB_LIST-- ---Begin make.conf--- USE_PACKAGE_DEPENDS=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles PACKAGE_BUILDING=yes PACKAGE_BUILDING_FLAVORS=yes #### /usr/local/etc/poudriere.d/make.conf #### # XXX: We really need this but cannot use it while 'make checksum' does not # try the next mirror on checksum failure. It currently retries the same # failed mirror and then fails rather then trying another. It *does* # try the next if the size is mismatched though. #MASTER_SITE_FREEBSD=yes # Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs MAKE_JOBS_NUMBER=2 #### /usr/ports/Mk/Scripts/ports_env.sh #### _CCVERSION_921dbbb2=FreeBSD clang version 15.0.7 (https://github.com/llvm/llvm-project.git llvmorg-15.0.7-0-g8dfdcc7b7bf6) Target: powerpc64-unknown-freebsd14.0 Thread model: posix InstalledDir: /usr/bin _ALTCCVERSION_921dbbb2=none _CXXINTERNAL_acaad9ca=FreeBSD clang version 15.0.7 (https://github.com/llvm/llvm-project.git llvmorg-15.0.7-0-g8dfdcc7b7bf6) Target: powerpc64-unknown-freebsd14.0 Thread model: posix InstalledDir: /usr/bin "/usr/bin/ld" "--eh-frame-hdr" "-dynamic-linker" "/libexec/ld-elf.so.1" "--enable-new-dtags" "-o" "a.out" "/usr/lib/crt1.o" "/usr/lib/crti.o" "/usr/lib/crtbegin.o" "-L/usr/lib" "/dev/null" "-lc++" "-lm" "-lgcc" "--as-needed" "-lgcc_s" "--no-as-needed" "-lc" "-lgcc" "--as-needed" "-lgcc_s" "--no-as-needed" "/usr/lib/crtend.o" "/usr/lib/crtn.o" CC_OUTPUT_921dbbb2_58173849=yes CC_OUTPUT_921dbbb2_9bdba57c=yes CC_OUTPUT_921dbbb2_6a4fe7f5=yes CC_OUTPUT_921dbbb2_6bcac02b=yes CC_OUTPUT_921dbbb2_67d20829=yes CC_OUTPUT_921dbbb2_bfa62e83=yes CC_OUTPUT_921dbbb2_f0b4d593=yes CC_OUTPUT_921dbbb2_308abb44=yes CC_OUTPUT_921dbbb2_f00456e5=yes CC_OUTPUT_921dbbb2_65ad290d=yes CC_OUTPUT_921dbbb2_f2776b26=yes CC_OUTPUT_921dbbb2_53255a77=yes CC_OUTPUT_921dbbb2_911cfe02=yes CC_OUTPUT_921dbbb2_b2657cc3=yes CC_OUTPUT_921dbbb2_380987f7=yes CC_OUTPUT_921dbbb2_160933ec=yes CC_OUTPUT_921dbbb2_fb62803b=yes CC_OUTPUT_921dbbb2_af59ad06=yes CC_OUTPUT_921dbbb2_a15f3fcf=yes _OBJC_CCVERSION_921dbbb2=FreeBSD clang version 15.0.7 (https://github.com/llvm/llvm-project.git llvmorg-15.0.7-0-g8dfdcc7b7bf6) Target: powerpc64-unknown-freebsd14.0 Thread model: posix InstalledDir: /usr/bin _OBJC_ALTCCVERSION_921dbbb2=none ARCH=powerpc64 PPC_ABI=ELFv2 OPSYS=FreeBSD _OSRELEASE=14.0-CURRENT OSREL=14.0 OSVERSION=1400079 PYTHONBASE=/usr/local CONFIGURE_MAX_CMD_LEN=524288 HAVE_PORTS_ENV=1 #### Misc Poudriere #### GID=0 UID=0 ---End make.conf--- --Resource limits-- cpu time (seconds, -t) unlimited file size (512-blocks, -f) unlimited data seg size (kbytes, -d) 33554432 stack size (kbytes, -s) 524288 core file size (512-blocks, -c) unlimited max memory size (kbytes, -m) unlimited locked memory (kbytes, -l) unlimited max user processes (-u) 89999 open files (-n) 1024 virtual mem size (kbytes, -v) unlimited swap limit (kbytes, -w) unlimited socket buffer size (bytes, -b) unlimited pseudo-terminals (-p) unlimited kqueues (-k) unlimited umtx shared locks (-o) unlimited --End resource limits-- =================================================== ===> License GPLv2+ accepted by the user =========================================================================== =================================================== ===> R-cran-rgdal-1.5.32_3 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-1.19.1.pkg [main-powerpc64-default-job-07] Installing pkg-1.19.1... [main-powerpc64-default-job-07] Extracting pkg-1.19.1: .......... done ===> R-cran-rgdal-1.5.32_3 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of R-cran-rgdal-1.5.32_3 =========================================================================== =================================================== =========================================================================== =================================================== ===> License GPLv2+ accepted by the user ===> Fetching all distfiles required by R-cran-rgdal-1.5.32_3 for building =========================================================================== =================================================== ===> License GPLv2+ accepted by the user ===> Fetching all distfiles required by R-cran-rgdal-1.5.32_3 for building => SHA256 Checksum OK for rgdal_1.5-32.tar.gz. =========================================================================== =================================================== =========================================================================== =================================================== ===> License GPLv2+ accepted by the user ===> Fetching all distfiles required by R-cran-rgdal-1.5.32_3 for building ===> Extracting for R-cran-rgdal-1.5.32_3 => SHA256 Checksum OK for rgdal_1.5-32.tar.gz. =========================================================================== =================================================== =========================================================================== =================================================== ===> Patching for R-cran-rgdal-1.5.32_3 =========================================================================== =================================================== ===> R-cran-rgdal-1.5.32_3 depends on package: R-cran-sp>=1.1.0 - not found ===> Installing existing package /packages/All/R-cran-sp-1.6.0.pkg [main-powerpc64-default-job-07] Installing R-cran-sp-1.6.0... [main-powerpc64-default-job-07] `-- Installing R-4.2.2... [main-powerpc64-default-job-07] | `-- Installing cairo-1.17.4_2,3... -Wl,-rpath=/usr/local/lib/gcc12 For ports leveraging USE_GCC, USES=compiler, or USES=fortran this happens transparently. ===== Message from ghostscript9-agpl-base-9.56.1_8: -- This package installs a script named dvipdf that depends on dvips. If you want to use this script you need to install print/tex-dvipsk. ===== Message from dejavu-2.37_1: -- Make sure that the freetype module is loaded. If it is not, add the following line to the "Modules" section of your X Windows configuration file: Load "freetype" Add the following line to the "Files" section of X Windows configuration file: FontPath "/usr/local/share/fonts/dejavu/" Note: your X Windows configuration file is typically /etc/X11/XF86Config if you are using XFree86, and /etc/X11/xorg.conf if you are using X.Org. ===> R-cran-rgdal-1.5.32_3 depends on package: R-cran-sp>=1.1.0 - found ===> Returning to build of R-cran-rgdal-1.5.32_3 ===> R-cran-rgdal-1.5.32_3 depends on file: /usr/local/bin/R - found ===> R-cran-rgdal-1.5.32_3 depends on executable: gfortran12 - found ===> R-cran-rgdal-1.5.32_3 depends on package: pkgconf>=1.3.0_1 - not found ===> Installing existing package /packages/All/pkgconf-1.8.1,1.pkg [main-powerpc64-default-job-07] Installing pkgconf-1.8.1,1... [main-powerpc64-default-job-07] Extracting pkgconf-1.8.1,1: .......... done ===> R-cran-rgdal-1.5.32_3 depends on package: pkgconf>=1.3.0_1 - found ===> Returning to build of R-cran-rgdal-1.5.32_3 ===> R-cran-rgdal-1.5.32_3 depends on file: /usr/local/bin/as - found =========================================================================== =================================================== ===> R-cran-rgdal-1.5.32_3 depends on shared library: libgdal.so - not found ===> Installing existing package /packages/All/gdal-3.6.2_1.pkg [main-powerpc64-default-job-07] Installing gdal-3.6.2_1... [main-powerpc64-default-job-07] `-- Installing freexl-1.0.6... [main-powerpc64-default-job-07] `-- Extracting freexl-1.0.6: .......... done [main-powerpc64-default-job-07] `-- Installing geos-3.11.1... [main-powerpc64-default-job-07] `-- Extracting geos-3.11.1: .......... done [main-powerpc64-default-job-07] `-- Installing giflib-5.2.1... 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[main-powerpc64-default-job-07] | `-- Extracting uriparser-0.9.6: .......... done [main-powerpc64-default-job-07] `-- Extracting libkml-1.3.0_25: .......... done [main-powerpc64-default-job-07] `-- Installing netcdf-4.9.0_2... [main-powerpc64-default-job-07] `-- Extracting netcdf-4.9.0_2: .......... done [main-powerpc64-default-job-07] `-- Installing poppler-23.01.0... [main-powerpc64-default-job-07] | `-- Installing nspr-4.35... [main-powerpc64-default-job-07] | `-- Extracting nspr-4.35: .......... done [main-powerpc64-default-job-07] | `-- Installing nss-3.87... [main-powerpc64-default-job-07] | `-- Extracting nss-3.87: .......... done [main-powerpc64-default-job-07] `-- Extracting poppler-23.01.0: .......... done [main-powerpc64-default-job-07] `-- Installing postgresql13-client-13.10... [main-powerpc64-default-job-07] `-- Extracting postgresql13-client-13.10: .......... done [main-powerpc64-default-job-07] `-- Installing qhull-8.0.2_1,1... [main-powerpc64-default-job-07] `-- Extracting qhull-8.0.2_1,1: .......... done [main-powerpc64-default-job-07] `-- Installing sfcgal-1.4.1_3... [main-powerpc64-default-job-07] `-- Extracting sfcgal-1.4.1_3: .......... done [main-powerpc64-default-job-07] `-- Installing shapelib-1.5.0... [main-powerpc64-default-job-07] `-- Extracting shapelib-1.5.0: .......... done [main-powerpc64-default-job-07] `-- Installing spatialite-5.0.1_4... [main-powerpc64-default-job-07] | `-- Installing librttopo-1.1.0... [main-powerpc64-default-job-07] | `-- Extracting librttopo-1.1.0: .......... done [main-powerpc64-default-job-07] `-- Extracting spatialite-5.0.1_4: .......... done [main-powerpc64-default-job-07] `-- Installing webp-1.3.0... [main-powerpc64-default-job-07] `-- Extracting webp-1.3.0: .......... done [main-powerpc64-default-job-07] `-- Installing xerces-c3-3.2.4... [main-powerpc64-default-job-07] `-- Extracting xerces-c3-3.2.4: .......... done [main-powerpc64-default-job-07] Extracting gdal-3.6.2_1: .......... done ===== Message from boost-libs-1.81.0: -- You have built the Boost library with thread support. Don't forget to add -pthread to your linker options when linking your code. ===== Message from postgresql13-client-13.10: -- The PostgreSQL port has a collection of "side orders": postgresql-docs For all of the html documentation p5-Pg A perl5 API for client access to PostgreSQL databases. postgresql-tcltk If you want tcl/tk client support. postgresql-jdbc For Java JDBC support. postgresql-odbc For client access from unix applications using ODBC as access method. Not needed to access unix PostgreSQL servers from Win32 using ODBC. See below. ruby-postgres, py-psycopg2 For client access to PostgreSQL databases using the ruby & python languages. postgresql-plperl, postgresql-pltcl & postgresql-plruby For using perl5, tcl & ruby as procedural languages. postgresql-contrib Lots of contributed utilities, postgresql functions and datatypes. There you find pg_standby, pgcrypto and many other cool things. etc... ===> R-cran-rgdal-1.5.32_3 depends on shared library: libgdal.so - found (/usr/local/lib/libgdal.so) ===> Returning to build of R-cran-rgdal-1.5.32_3 ===> R-cran-rgdal-1.5.32_3 depends on shared library: libproj.so - found (/usr/local/lib/libproj.so) =========================================================================== =================================================== ===> Configuring for R-cran-rgdal-1.5.32_3 =========================================================================== =================================================== =========================================================================== =================================================== ===> R-cran-rgdal-1.5.32_3 depends on package: R-cran-sp>=1.1.0 - found ===> R-cran-rgdal-1.5.32_3 depends on file: /usr/local/bin/R - found ===> R-cran-rgdal-1.5.32_3 depends on executable: gfortran12 - found =========================================================================== =================================================== ===> Staging for R-cran-rgdal-1.5.32_3 ===> Generating temporary packing list * installing *source* package 'rgdal' ... ** package 'rgdal' successfully unpacked and MD5 sums checked ** using staged installation configure: R_HOME: /usr/local/lib/R configure: CC: cc configure: CXX: c++ configure: CFLAGS: -O2 -pipe -fstack-protector-strong -fno-strict-aliasing configure: CPPFLAGS: configure: CXXFLAGS: -O2 -pipe -fstack-protector-strong -fno-strict-aliasing configure: LDFLAGS: -Wl,-rpath=/usr/local/lib/gcc12 -L/usr/local/lib/gcc12 -B/usr/local/bin -fstack-protector-strong configure: LDFLAGS: -Wl,-rpath=/usr/local/lib/gcc12 -L/usr/local/lib/gcc12 -B/usr/local/bin -fstack-protector-strong configure: CXX11 is: c++, CXX11STD is: -std=gnu++11 configure: CXX is: c++ -std=gnu++11 configure: C++11 support available configure: rgdal: 1.5-32 checking for /usr/bin/svnversion... no configure: svn revision: 1176 checking for gdal-config... /usr/local/bin/gdal-config checking gdal-config usability... yes configure: GDAL: 3.6.2 checking GDAL version >= 1.11.4... yes checking GDAL version <= 2.5 or >= 3.0... yes checking GDAL: linking with --libs only... yes checking GDAL: gdal-config data directory readable... yes checking GDAL: /usr/local/share/gdal/stateplane.csv readable... yes configure: pkg-config proj exists, will use it configure: PROJ version: 9.1.1 configure: PROJ CPP flags: -DPROJ_H_API -I/usr/local/include configure: PROJ LIBS: -L/usr/local/lib -lproj checking PROJ header API:... yes checking whether the C++ compiler works... yes checking for C++ compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... Segmentation fault (core dumped) configure: error: in `/wrkdirs/usr/ports/graphics/R-cran-rgdal/work/rgdal': configure: error: cannot run C++ compiled programs. If you meant to cross compile, use `--host'. See `config.log' for more details ERROR: configuration failed for package 'rgdal' * removing '/wrkdirs/usr/ports/graphics/R-cran-rgdal/work/stage/usr/local/lib/R/library/rgdal' *** Error code 1 Stop. make: stopped in /usr/ports/graphics/R-cran-rgdal