[package - main-powerpc64-default][biology/megahit] Failed for megahit-1.2.9_1 in build
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Date: Wed, 22 Feb 2023 04:54:02 UTC
You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.
Maintainer: jwb@FreeBSD.org
Log URL: https://pkg-status.freebsd.org/foul1/data/main-powerpc64-default/pb64d2f1e5acf_sc92790b3fb/logs/megahit-1.2.9_1.log
Build URL: https://pkg-status.freebsd.org/foul1/build.html?mastername=main-powerpc64-default&build=pb64d2f1e5acf_sc92790b3fb
Log:
=>> Building biology/megahit
build started at Wed Feb 22 04:53:16 UTC 2023
port directory: /usr/ports/biology/megahit
package name: megahit-1.2.9_1
building for: FreeBSD main-powerpc64-default-job-07 14.0-CURRENT FreeBSD 14.0-CURRENT 1400079 powerpc
maintained by: jwb@FreeBSD.org
Makefile ident:
Poudriere version: 3.2.8-23-ga7f8d188
Host OSVERSION: 1400073
Jail OSVERSION: 1400079
Job Id: 07
!!! Jail is newer than host. (Jail: 1400079, Host: 1400073) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!
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=======================<phase: check-sanity >============================
===> License GPLv3 accepted by the user
===========================================================================
=======================<phase: pkg-depends >============================
===> megahit-1.2.9_1 depends on file: /usr/local/sbin/pkg - not found
===> Installing existing package /packages/All/pkg-1.19.1.pkg
[main-powerpc64-default-job-07] Installing pkg-1.19.1...
[main-powerpc64-default-job-07] Extracting pkg-1.19.1: .......... done
===> megahit-1.2.9_1 depends on file: /usr/local/sbin/pkg - found
===> Returning to build of megahit-1.2.9_1
===========================================================================
=======================<phase: fetch-depends >============================
===========================================================================
=======================<phase: fetch >============================
===> License GPLv3 accepted by the user
===> Fetching all distfiles required by megahit-1.2.9_1 for building
===========================================================================
=======================<phase: checksum >============================
===> License GPLv3 accepted by the user
===> Fetching all distfiles required by megahit-1.2.9_1 for building
=> SHA256 Checksum OK for voutcn-megahit-v1.2.9_GH0.tar.gz.
===========================================================================
=======================<phase: extract-depends>============================
===========================================================================
=======================<phase: extract >============================
===> License GPLv3 accepted by the user
===> Fetching all distfiles required by megahit-1.2.9_1 for building
===> Extracting for megahit-1.2.9_1
=> SHA256 Checksum OK for voutcn-megahit-v1.2.9_GH0.tar.gz.
===========================================================================
=======================<phase: patch-depends >============================
===========================================================================
=======================<phase: patch >============================
===> Patching for megahit-1.2.9_1
===> Applying FreeBSD patches for megahit-1.2.9_1 from /usr/ports/biology/megahit/files
===========================================================================
=======================<phase: build-depends >============================
===> megahit-1.2.9_1 depends on file: /usr/local/bin/cmake - not found
===> Installing existing package /packages/All/cmake-core-3.25.1.pkg
[main-powerpc64-default-job-07] Installing cmake-core-3.25.1...
[main-powerpc64-default-job-07] `-- Installing expat-2.5.0...
<snip>
^
In file included from /wrkdirs/usr/ports/biology/megahit/work/megahit-1.2.9/src/main_assemble.cpp:29:
In file included from /wrkdirs/usr/ports/biology/megahit/work/megahit-1.2.9/src/assembly/all_algo.h:8:
In file included from /wrkdirs/usr/ports/biology/megahit/work/megahit-1.2.9/src/assembly/bubble_remover.h:10:
In file included from /wrkdirs/usr/ports/biology/megahit/work/megahit-1.2.9/src/assembly/unitig_graph.h:11:
In file included from /wrkdirs/usr/ports/biology/megahit/work/megahit-1.2.9/src/sdbg/sdbg.h:15:
In file included from /wrkdirs/usr/ports/biology/megahit/work/megahit-1.2.9/src/kmlib/kmrns.h:11:
In file included from /usr/lib/clang/15.0.7/include/ppc_wrappers/x86intrin.h:25:
In file included from /usr/lib/clang/15.0.7/include/ppc_wrappers/immintrin.h:17:
/usr/lib/clang/15.0.7/include/ppc_wrappers/xmmintrin.h:101:11: error: use of undeclared identifier 'vec_vsx_ld'
return (vec_vsx_ld(0, __P));
^
/usr/lib/clang/15.0.7/include/ppc_wrappers/xmmintrin.h:320:9: error: use of undeclared identifier 'vec_sqrt'; did you mean 'vec_rsqrt'?
__c = vec_sqrt(__a);
^
/usr/lib/clang/15.0.7/include/altivec.h:8543:34: note: 'vec_rsqrt' declared here
static vector float __ATTRS_o_ai vec_rsqrt(vector float __a) {
^
In file included from /wrkdirs/usr/ports/biology/megahit/work/megahit-1.2.9/src/main_assemble.cpp:29:
In file included from /wrkdirs/usr/ports/biology/megahit/work/megahit-1.2.9/src/assembly/all_algo.h:8:
In file included from /wrkdirs/usr/ports/biology/megahit/work/megahit-1.2.9/src/assembly/bubble_remover.h:10:
In file included from /wrkdirs/usr/ports/biology/megahit/work/megahit-1.2.9/src/assembly/unitig_graph.h:11:
In file included from /wrkdirs/usr/ports/biology/megahit/work/megahit-1.2.9/src/sdbg/sdbg.h:15:
In file included from /wrkdirs/usr/ports/biology/megahit/work/megahit-1.2.9/src/kmlib/kmrns.h:11:
In file included from /usr/lib/clang/15.0.7/include/ppc_wrappers/x86intrin.h:25:
In file included from /usr/lib/clang/15.0.7/include/ppc_wrappers/immintrin.h:17:
/usr/lib/clang/15.0.7/include/ppc_wrappers/xmmintrin.h:354:11: error: use of undeclared identifier 'vec_sqrt'; did you mean 'vec_rsqrt'?
return (vec_sqrt((__v4sf)__A));
^
/usr/lib/clang/15.0.7/include/altivec.h:8543:34: note: 'vec_rsqrt' declared here
static vector float __ATTRS_o_ai vec_rsqrt(vector float __a) {
^
In file included from /wrkdirs/usr/ports/biology/megahit/work/megahit-1.2.9/src/main_assemble.cpp:29:
In file included from /wrkdirs/usr/ports/biology/megahit/work/megahit-1.2.9/src/assembly/all_algo.h:8:
In file included from /wrkdirs/usr/ports/biology/megahit/work/megahit-1.2.9/src/assembly/bubble_remover.h:10:
In file included from /wrkdirs/usr/ports/biology/megahit/work/megahit-1.2.9/src/assembly/unitig_graph.h:11:
In file included from /wrkdirs/usr/ports/biology/megahit/work/megahit-1.2.9/src/sdbg/sdbg.h:15:
In file included from /wrkdirs/usr/ports/biology/megahit/work/megahit-1.2.9/src/kmlib/kmrns.h:11:
In file included from /usr/lib/clang/15.0.7/include/ppc_wrappers/x86intrin.h:25:
In file included from /usr/lib/clang/15.0.7/include/ppc_wrappers/immintrin.h:17:
/usr/lib/clang/15.0.7/include/ppc_wrappers/xmmintrin.h:957:21: error: use of 'long long' with '__vector' requires VSX support (available on POWER7 or later) to be enabled
__vector unsigned long long __result;
^
/usr/lib/clang/15.0.7/include/ppc_wrappers/xmmintrin.h:960:40: error: use of 'long long' with '__vector' requires VSX support (available on POWER7 or later) to be enabled
__temp = (__v4sf)vec_splat((__vector long long)__A, 0);
^
/usr/lib/clang/15.0.7/include/ppc_wrappers/xmmintrin.h:960:20: error: call to 'vec_splat' is ambiguous
__temp = (__v4sf)vec_splat((__vector long long)__A, 0);
^~~~~~~~~
/usr/lib/clang/15.0.7/include/altivec.h:10078:1: note: candidate function
vec_splat(vector signed char __a, unsigned const int __b) {
^
/usr/lib/clang/15.0.7/include/altivec.h:10083:1: note: candidate function
vec_splat(vector unsigned char __a, unsigned const int __b) {
^
/usr/lib/clang/15.0.7/include/altivec.h:10088:1: note: candidate function
vec_splat(vector bool char __a, unsigned const int __b) {
^
/usr/lib/clang/15.0.7/include/altivec.h:10093:1: note: candidate function
vec_splat(vector signed short __a, unsigned const int __b) {
^
/usr/lib/clang/15.0.7/include/altivec.h:10102:1: note: candidate function
vec_splat(vector unsigned short __a, unsigned const int __b) {
^
/usr/lib/clang/15.0.7/include/altivec.h:10111:1: note: candidate function
vec_splat(vector bool short __a, unsigned const int __b) {
^
/usr/lib/clang/15.0.7/include/altivec.h:10119:45: note: candidate function
static __inline__ vector pixel __ATTRS_o_ai vec_splat(vector pixel __a,
^
/usr/lib/clang/15.0.7/include/altivec.h:10129:1: note: candidate function
vec_splat(vector signed int __a, unsigned const int __b) {
^
/usr/lib/clang/15.0.7/include/altivec.h:10138:1: note: candidate function
vec_splat(vector unsigned int __a, unsigned const int __b) {
^
/usr/lib/clang/15.0.7/include/altivec.h:10147:1: note: candidate function
vec_splat(vector bool int __a, unsigned const int __b) {
^
/usr/lib/clang/15.0.7/include/altivec.h:10155:45: note: candidate function
static __inline__ vector float __ATTRS_o_ai vec_splat(vector float __a,
^
In file included from /wrkdirs/usr/ports/biology/megahit/work/megahit-1.2.9/src/main_assemble.cpp:29:
In file included from /wrkdirs/usr/ports/biology/megahit/work/megahit-1.2.9/src/assembly/all_algo.h:8:
In file included from /wrkdirs/usr/ports/biology/megahit/work/megahit-1.2.9/src/assembly/bubble_remover.h:10:
In file included from /wrkdirs/usr/ports/biology/megahit/work/megahit-1.2.9/src/assembly/unitig_graph.h:11:
In file included from /wrkdirs/usr/ports/biology/megahit/work/megahit-1.2.9/src/sdbg/sdbg.h:15:
In file included from /wrkdirs/usr/ports/biology/megahit/work/megahit-1.2.9/src/kmlib/kmrns.h:11:
In file included from /usr/lib/clang/15.0.7/include/ppc_wrappers/x86intrin.h:25:
In file included from /usr/lib/clang/15.0.7/include/ppc_wrappers/immintrin.h:17:
/usr/lib/clang/15.0.7/include/ppc_wrappers/xmmintrin.h:961:15: error: use of undeclared identifier 'vec_rint'
__rounded = vec_rint(__temp);
^
/usr/lib/clang/15.0.7/include/ppc_wrappers/xmmintrin.h:962:33: error: use of 'long long' with '__vector' requires VSX support (available on POWER7 or later) to be enabled
__result = (__vector unsigned long long)vec_cts(__rounded, 0);
^
/usr/lib/clang/15.0.7/include/ppc_wrappers/xmmintrin.h:964:28: error: use of 'long long' with '__vector' requires VSX support (available on POWER7 or later) to be enabled
return (__m64)((__vector long long)__result)[0];
^
/usr/lib/clang/15.0.7/include/ppc_wrappers/xmmintrin.h:1015:21: error: use of 'long long' with '__vector' requires VSX support (available on POWER7 or later) to be enabled
__vector unsigned long long __result;
^
/usr/lib/clang/15.0.7/include/ppc_wrappers/xmmintrin.h:1018:40: error: use of 'long long' with '__vector' requires VSX support (available on POWER7 or later) to be enabled
__temp = (__v4sf)vec_splat((__vector long long)__A, 0);
^
/usr/lib/clang/15.0.7/include/ppc_wrappers/xmmintrin.h:1018:20: error: call to 'vec_splat' is ambiguous
__temp = (__v4sf)vec_splat((__vector long long)__A, 0);
^~~~~~~~~
/usr/lib/clang/15.0.7/include/altivec.h:10078:1: note: candidate function
vec_splat(vector signed char __a, unsigned const int __b) {
^
/usr/lib/clang/15.0.7/include/altivec.h:10083:1: note: candidate function
vec_splat(vector unsigned char __a, unsigned const int __b) {
^
/usr/lib/clang/15.0.7/include/altivec.h:10088:1: note: candidate function
vec_splat(vector bool char __a, unsigned const int __b) {
^
/usr/lib/clang/15.0.7/include/altivec.h:10093:1: note: candidate function
vec_splat(vector signed short __a, unsigned const int __b) {
^
/usr/lib/clang/15.0.7/include/altivec.h:10102:1: note: candidate function
vec_splat(vector unsigned short __a, unsigned const int __b) {
^
/usr/lib/clang/15.0.7/include/altivec.h:10111:1: note: candidate function
vec_splat(vector bool short __a, unsigned const int __b) {
^
/usr/lib/clang/15.0.7/include/altivec.h:10119:45: note: candidate function
static __inline__ vector pixel __ATTRS_o_ai vec_splat(vector pixel __a,
^
/usr/lib/clang/15.0.7/include/altivec.h:10129:1: note: candidate function
vec_splat(vector signed int __a, unsigned const int __b) {
^
/usr/lib/clang/15.0.7/include/altivec.h:10138:1: note: candidate function
vec_splat(vector unsigned int __a, unsigned const int __b) {
^
/usr/lib/clang/15.0.7/include/altivec.h:10147:1: note: candidate function
vec_splat(vector bool int __a, unsigned const int __b) {
^
/usr/lib/clang/15.0.7/include/altivec.h:10155:45: note: candidate function
static __inline__ vector float __ATTRS_o_ai vec_splat(vector float __a,
^
In file included from /wrkdirs/usr/ports/biology/megahit/work/megahit-1.2.9/src/main_assemble.cpp:29:
In file included from /wrkdirs/usr/ports/biology/megahit/work/megahit-1.2.9/src/assembly/all_algo.h:8:
In file included from /wrkdirs/usr/ports/biology/megahit/work/megahit-1.2.9/src/assembly/bubble_remover.h:10:
In file included from /wrkdirs/usr/ports/biology/megahit/work/megahit-1.2.9/src/assembly/unitig_graph.h:11:
In file included from /wrkdirs/usr/ports/biology/megahit/work/megahit-1.2.9/src/sdbg/sdbg.h:15:
In file included from /wrkdirs/usr/ports/biology/megahit/work/megahit-1.2.9/src/kmlib/kmrns.h:11:
In file included from /usr/lib/clang/15.0.7/include/ppc_wrappers/x86intrin.h:25:
In file included from /usr/lib/clang/15.0.7/include/ppc_wrappers/immintrin.h:17:
/usr/lib/clang/15.0.7/include/ppc_wrappers/xmmintrin.h:1019:33: error: use of 'long long' with '__vector' requires VSX support (available on POWER7 or later) to be enabled
__result = (__vector unsigned long long)vec_cts(__temp, 0);
^
/usr/lib/clang/15.0.7/include/ppc_wrappers/xmmintrin.h:1021:28: error: use of 'long long' with '__vector' requires VSX support (available on POWER7 or later) to be enabled
return (__m64)((__vector long long)__result)[0];
^
/usr/lib/clang/15.0.7/include/ppc_wrappers/xmmintrin.h:1072:51: error: use of 'long long' with '__vector' requires VSX support (available on POWER7 or later) to be enabled
__vm1 = (__vector signed int)(__vector unsigned long long){__B, __B};
^
fatal error: too many errors emitted, stopping now [-ferror-limit=]
4 warnings and 20 errors generated.
[ 1% 2/110] /usr/bin/c++ -I/wrkdirs/usr/ports/biology/megahit/work/megahit-1.2.9/src -O2 -pipe -pthread -fstack-protector-strong -fno-strict-aliasing -fopenmp=libomp -DXXH_INLINE_ALL -ftemplate-depth=3000 -Wall -Wno-unused-function -D__XROOT__='"/wrkdirs/usr/ports/biology/megahit/work/megahit-1.2.9/src"' -DNDEBUG -mbmi2 -DUSE_BMI2 -mpopcnt -std=gnu++11 -MD -MT CMakeFiles/megahit_core.dir/src/main.cpp.o -MF CMakeFiles/megahit_core.dir/src/main.cpp.o.d -o CMakeFiles/megahit_core.dir/src/main.cpp.o -c /wrkdirs/usr/ports/biology/megahit/work/megahit-1.2.9/src/main.cpp
FAILED: CMakeFiles/megahit_core.dir/src/main.cpp.o
/usr/bin/c++ -I/wrkdirs/usr/ports/biology/megahit/work/megahit-1.2.9/src -O2 -pipe -pthread -fstack-protector-strong -fno-strict-aliasing -fopenmp=libomp -DXXH_INLINE_ALL -ftemplate-depth=3000 -Wall -Wno-unused-function -D__XROOT__='"/wrkdirs/usr/ports/biology/megahit/work/megahit-1.2.9/src"' -DNDEBUG -mbmi2 -DUSE_BMI2 -mpopcnt -std=gnu++11 -MD -MT CMakeFiles/megahit_core.dir/src/main.cpp.o -MF CMakeFiles/megahit_core.dir/src/main.cpp.o.d -o CMakeFiles/megahit_core.dir/src/main.cpp.o -c /wrkdirs/usr/ports/biology/megahit/work/megahit-1.2.9/src/main.cpp
c++: warning: argument unused during compilation: '-mbmi2' [-Wunused-command-line-argument]
c++: warning: argument unused during compilation: '-mpopcnt' [-Wunused-command-line-argument]
Assertion failed: (IsValid && "Failed to parse output constraint"), function EmitAsmStmt, file /usr/local/poudriere/jails/main-powerpc64/usr/src/contrib/llvm-project/clang/lib/CodeGen/CGStmt.cpp, line 2336.
PLEASE submit a bug report to https://bugs.freebsd.org/submit/ and include the crash backtrace, preprocessed source, and associated run script.
Stack dump:
0. Program arguments: /usr/bin/c++ -I/wrkdirs/usr/ports/biology/megahit/work/megahit-1.2.9/src -O2 -pipe -pthread -fstack-protector-strong -fno-strict-aliasing -fopenmp=libomp -DXXH_INLINE_ALL -ftemplate-depth=3000 -Wall -Wno-unused-function -D__XROOT__=\"/wrkdirs/usr/ports/biology/megahit/work/megahit-1.2.9/src\" -DNDEBUG -mbmi2 -DUSE_BMI2 -mpopcnt -std=gnu++11 -MD -MT CMakeFiles/megahit_core.dir/src/main.cpp.o -MF CMakeFiles/megahit_core.dir/src/main.cpp.o.d -o CMakeFiles/megahit_core.dir/src/main.cpp.o -c /wrkdirs/usr/ports/biology/megahit/work/megahit-1.2.9/src/main.cpp
1. <eof> parser at end of file
2. Per-file LLVM IR generation
3. /wrkdirs/usr/ports/biology/megahit/work/megahit-1.2.9/src/utils/cpu_dispatch.h:8:13: Generating code for declaration 'HasPopcnt'
#0 0x0000000015500dec (/usr/bin/c+++0x15500dec)
#1 0x00000000154fe3e8 (/usr/bin/c+++0x154fe3e8)
#2 0x0000000015491060 (/usr/bin/c+++0x15491060)
#3 0x000000001549133c (/usr/bin/c+++0x1549133c)
#4 0x000000081783b348 (/lib/libthr.so.3+0x2f348)
c++: error: clang frontend command failed with exit code 134 (use -v to see invocation)
FreeBSD clang version 15.0.7 (https://github.com/llvm/llvm-project.git llvmorg-15.0.7-0-g8dfdcc7b7bf6)
Target: powerpc64-unknown-freebsd14.0
Thread model: posix
InstalledDir: /usr/bin
c++: note: diagnostic msg:
********************
PLEASE ATTACH THE FOLLOWING FILES TO THE BUG REPORT:
Preprocessed source(s) and associated run script(s) are located at:
c++: note: diagnostic msg: /tmp/main-aa2116.cpp
c++: note: diagnostic msg: /tmp/main-aa2116.sh
c++: note: diagnostic msg:
********************
ninja: build stopped: subcommand failed.
===> Compilation failed unexpectedly.
Try to set MAKE_JOBS_UNSAFE=yes and rebuild before reporting the failure to
the maintainer.
*** Error code 1
Stop.
make: stopped in /usr/ports/biology/megahit