[package - 131releng-armv7-quarterly][graphics/elastix] Failed for elastix-5.1.0 in configure
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Date: Fri, 28 Apr 2023 07:19:22 UTC
You are receiving this mail as a port that you maintain is failing to build on the FreeBSD package build server. Please investigate the failure and submit a PR to fix build. Maintainer: yuri@FreeBSD.org Log URL: https://pkg-status.freebsd.org/ampere1/data/131releng-armv7-quarterly/60e7cbc83321/logs/elastix-5.1.0.log Build URL: https://pkg-status.freebsd.org/ampere1/build.html?mastername=131releng-armv7-quarterly&build=60e7cbc83321 Log: =>> Building graphics/elastix build started at Fri Apr 28 07:18:05 UTC 2023 port directory: /usr/ports/graphics/elastix package name: elastix-5.1.0 building for: FreeBSD 131releng-armv7-quarterly-job-09 13.1-RELEASE-p7 FreeBSD 13.1-RELEASE-p7 1301000 arm maintained by: yuri@FreeBSD.org Makefile ident: Poudriere version: 3.2.8-23-ga7f8d188 Host OSVERSION: 1400073 Jail OSVERSION: 1301000 Job Id: 09 ---Begin Environment--- SHELL=/bin/csh OSVERSION=1301000 UNAME_v=FreeBSD 13.1-RELEASE-p7 1301000 UNAME_r=13.1-RELEASE-p7 BLOCKSIZE=K MAIL=/var/mail/root MM_CHARSET=UTF-8 LANG=C.UTF-8 STATUS=1 HOME=/root PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin LOCALBASE=/usr/local USER=root LIBEXECPREFIX=/usr/local/libexec/poudriere POUDRIERE_VERSION=3.2.8-23-ga7f8d188 MASTERMNT=/usr/local/poudriere/data/.m/131releng-armv7-quarterly/ref POUDRIERE_BUILD_TYPE=bulk PACKAGE_BUILDING=yes SAVED_TERM= PWD=/usr/local/poudriere/data/.m/131releng-armv7-quarterly/ref/.p/pool P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS MASTERNAME=131releng-armv7-quarterly SCRIPTPREFIX=/usr/local/share/poudriere OLDPWD=/usr/local/poudriere/data/.m/131releng-armv7-quarterly/ref/.p SCRIPTPATH=/usr/local/share/poudriere/bulk.sh POUDRIEREPATH=/usr/local/bin/poudriere ---End Environment--- ---Begin Poudriere Port Flags/Env--- PORT_FLAGS= PKGENV= FLAVOR= DEPENDS_ARGS= MAKE_ARGS= ---End Poudriere Port Flags/Env--- ---Begin OPTIONS List--- ---End OPTIONS List--- --MAINTAINER-- yuri@FreeBSD.org --End MAINTAINER-- --CONFIGURE_ARGS-- --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- XDG_DATA_HOME=/wrkdirs/usr/ports/graphics/elastix/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/graphics/elastix/work XDG_CACHE_HOME=/wrkdirs/usr/ports/graphics/elastix/work/.cache HOME=/wrkdirs/usr/ports/graphics/elastix/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/graphics/elastix/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/graphics/elastix/work/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig SHELL=/bin/sh CONFIG_SHELL=/bin/sh --End CONFIGURE_ENV-- --MAKE_ENV-- NINJA_STATUS="[%p %s/%t] " XDG_DATA_HOME=/wrkdirs/usr/ports/graphics/elastix/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/graphics/elastix/work XDG_CACHE_HOME=/wrkdirs/usr/ports/graphics/elastix/work/.cache HOME=/wrkdirs/usr/ports/graphics/elastix/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/graphics/elastix/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/graphics/elastix/work/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES DESTDIR=/wrkdirs/usr/ports/graphics/elastix/work/stage PREFIX=/usr/local LOCALBASE=/usr/local CC="cc" CFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " CPP="cpp" CPPFLAGS="" LDFLAGS=" -fstack-protector-strong " LIBS="" CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing -I/usr/local/include/double-conversion " MANPREFIX="/usr/local" BSD_INSTALL_PR OGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" --End MAKE_ENV-- --PLIST_SUB-- CMAKE_BUILD_TYPE="release" OSREL=13.1 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/elastix" EXAMPLESDIR="share/examples/elastix" DATADIR="share/elastix" WWWDIR="www/elastix" ETCDIR="etc/elastix" --End PLIST_SUB-- --SUB_LIST-- PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/elastix DOCSDIR=/usr/local/share/doc/elastix EXAMPLESDIR=/usr/local/share/examples/elastix WWWDIR=/usr/local/www/elastix ETCDIR=/usr/local/etc/elastix --End SUB_LIST-- ---Begin make.conf--- USE_PACKAGE_DEPENDS=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles PACKAGE_BUILDING=yes PACKAGE_BUILDING_FLAVORS=yes #### /usr/local/etc/poudriere.d/make.conf #### # XXX: We really need this but cannot use it while 'make checksum' does not # try the next mirror on checksum failure. It currently retries the same # failed mirror and then fails rather then trying another. It *does* # try the next if the size is mismatched though. #MASTER_SITE_FREEBSD=yes # Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs MAKE_JOBS_NUMBER=2 #### /usr/ports/Mk/Scripts/ports_env.sh #### _CCVERSION_921dbbb2=FreeBSD clang version 13.0.0 (git@github.com:llvm/llvm-project.git llvmorg-13.0.0-0-gd7b669b3a303) Target: armv7-unknown-freebsd13.1-gnueabihf Thread model: posix InstalledDir: /usr/bin _ALTCCVERSION_921dbbb2=none _CXXINTERNAL_acaad9ca=FreeBSD clang version 13.0.0 (git@github.com:llvm/llvm-project.git llvmorg-13.0.0-0-gd7b669b3a303) Target: armv7-unknown-freebsd13.1-gnueabihf Thread model: posix InstalledDir: /usr/bin "/usr/bin/ld" "--eh-frame-hdr" "-dynamic-linker" "/libexec/ld-elf.so.1" "--hash-style=both" "--enable-new-dtags" "-o" "a.out" "/usr/lib/crt1.o" "/usr/lib/crti.o" "/usr/lib/crtbegin.o" "-L/usr/lib" "/dev/null" "-lc++" "-lm" "-lgcc" "--as-needed" "-lgcc_s" "--no-as-needed" "-lc" "-lgcc" "--as-needed" "-lgcc_s" "--no-as-needed" "/usr/lib/crtend.o" "/usr/lib/crtn.o" CC_OUTPUT_921dbbb2_58173849=yes CC_OUTPUT_921dbbb2_9bdba57c=yes CC_OUTPUT_921dbbb2_6a4fe7f5=yes CC_OUTPUT_921dbbb2_6bcac02b=yes CC_OUTPUT_921dbbb2_67d20829=yes CC_OUTPUT_921dbbb2_bfa62e83=yes CC_OUTPUT_921dbbb2_f0b4d593=yes CC_OUTPUT_921dbbb2_308abb44=yes CC_OUTPUT_921dbbb2_f00456e5=yes CC_OUTPUT_921dbbb2_65ad290d=yes CC_OUTPUT_921dbbb2_f2776b26=yes CC_OUTPUT_921dbbb2_53255a77=yes CC_OUTPUT_921dbbb2_911cfe02=yes CC_OUTPUT_921dbbb2_b2657cc3=yes CC_OUTPUT_921dbbb2_380987f7=yes CC_OUTPUT_921dbbb2_160933ec=yes CC_OUTPUT_921dbbb2_fb62803b=yes CC_OUTPUT_921dbbb2_af59ad06=yes CC_OUTPUT_921dbbb2_a15f3fcf=yes _OBJC_CCVERSION_921dbbb2=FreeBSD clang version 13.0.0 (git@github.com:llvm/llvm-project.git llvmorg-13.0.0-0-gd7b669b3a303) Target: armv7-unknown-freebsd13.1-gnueabihf Thread model: posix InstalledDir: /usr/bin _OBJC_ALTCCVERSION_921dbbb2=none ARCH=armv7 OPSYS=FreeBSD _OSRELEASE=13.1-RELEASE-p7 OSREL=13.1 OSVERSION=1301000 PYTHONBASE=/usr/local CONFIGURE_MAX_CMD_LEN=524288 HAVE_PORTS_ENV=1 #### Misc Poudriere #### GID=0 UID=0 ---End make.conf--- --Resource limits-- cpu time (seconds, -t) unlimited file size (512-blocks, -f) unlimited data seg size (kbytes, -d) 1048576 stack size (kbytes, -s) 1048576 core file size (512-blocks, -c) unlimited max memory size (kbytes, -m) unlimited locked memory (kbytes, -l) unlimited max user processes (-u) 89999 open files (-n) 1024 virtual mem size (kbytes, -v) unlimited swap limit (kbytes, -w) unlimited socket buffer size (bytes, -b) unlimited pseudo-terminals (-p) unlimited kqueues (-k) unlimited umtx shared locks (-o) unlimited --End resource limits-- =======================<phase: check-sanity >============================ ===> License APACHE20 accepted by the user =========================================================================== =======================<phase: pkg-depends >============================ ===> elastix-5.1.0 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-1.19.1_1.pkg [131releng-armv7-quarterly-job-09] Installing pkg-1.19.1_1... [131releng-armv7-quarterly-job-09] Extracting pkg-1.19.1_1: .......... done ===> elastix-5.1.0 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of elastix-5.1.0 =========================================================================== =======================<phase: fetch-depends >============================ =========================================================================== =======================<phase: fetch >============================ ===> License APACHE20 accepted by the user ===> Fetching all distfiles required by elastix-5.1.0 for building =========================================================================== =======================<phase: checksum >============================ ===> License APACHE20 accepted by the user ===> Fetching all distfiles required by elastix-5.1.0 for building => SHA256 Checksum OK for SuperElastix-elastix-5.1.0_GH0.tar.gz. =========================================================================== =======================<phase: extract-depends>============================ =========================================================================== =======================<phase: extract >============================ ===> License APACHE20 accepted by the user ===> Fetching all distfiles required by elastix-5.1.0 for building ===> Extracting for elastix-5.1.0 => SHA256 Checksum OK for SuperElastix-elastix-5.1.0_GH0.tar.gz. =========================================================================== =======================<phase: patch-depends >============================ =========================================================================== =======================<phase: patch >============================ ===> Patching for elastix-5.1.0 =========================================================================== =======================<phase: build-depends >============================ ===> elastix-5.1.0 depends on file: /usr/local/bin/cmake - not found ===> Installing existing package /packages/All/cmake-core-3.25.1.pkg [131releng-armv7-quarterly-job-09] Installing cmake-core-3.25.1... [131releng-armv7-quarterly-job-09] `-- Installing expat-2.5.0... [131releng-armv7-quarterly-job-09] `-- Extracting expat-2.5.0: .......... done [131releng-armv7-quarterly-job-09] `-- Installing jsoncpp-1.9.5... [131releng-armv7-quarterly-job-09] `-- Extracting jsoncpp-1.9.5: .......... done [131releng-armv7-quarterly-job-09] `-- Installing libuv-1.44.2... [131releng-armv7-quarterly-job-09] `-- Extracting libuv-1.44.2: .......... done [131releng-armv7-quarterly-job-09] `-- Installing rhash-1.4.3... [131releng-armv7-quarterly-job-09] | `-- Installing gettext-runtime-0.21.1... [131releng-armv7-quarterly-job-09] | | `-- Installing indexinfo-0.3.1... [131releng-armv7-quarterly-job-09] | | `-- Extracting indexinfo-0.3.1: .... done [131releng-armv7-quarterly-job-09] | `-- Extracting gettext-runtime-0.21.1: .......... done [131releng-armv7-quarterly-job-09] `-- Extracting rhash-1.4.3: .......... done [131releng-armv7-quarterly-job-09] Extracting cmake-core-3.25.1: .......... done <snip> ===> NOTICE: The fftw port currently does not have a maintainer. As a result, it is more likely to have unresolved issues, not be up-to-date, or even be removed in the future. To volunteer to maintain this port, please create an issue at: https://bugs.freebsd.org/bugzilla More information about port maintainership is available at: https://docs.freebsd.org/en/articles/contributing/#ports-contributing ===== Message from freetype2-2.12.1_2: -- The 2.7.x series now uses the new subpixel hinting mode (V40 port's option) as the default, emulating a modern version of ClearType. This change inevitably leads to different rendering results, and you might change port's options to adapt it to your taste (or use the new "FREETYPE_PROPERTIES" environment variable). The environment variable "FREETYPE_PROPERTIES" can be used to control the driver properties. Example: FREETYPE_PROPERTIES=truetype:interpreter-version=35 \ cff:no-stem-darkening=1 \ autofitter:warping=1 This allows to select, say, the subpixel hinting mode at runtime for a given application. If LONG_PCF_NAMES port's option was enabled, the PCF family names may include the foundry and information whether they contain wide characters. For example, "Sony Fixed" or "Misc Fixed Wide", instead of "Fixed". This can be disabled at run time with using pcf:no-long-family-names property, if needed. Example: FREETYPE_PROPERTIES=pcf:no-long-family-names=1 How to recreate fontconfig cache with using such environment variable, if needed: # env FREETYPE_PROPERTIES=pcf:no-long-family-names=1 fc-cache -fsv The controllable properties are listed in the section "Controlling FreeType Modules" in the reference's table of contents (/usr/local/share/doc/freetype2/reference/index.html, if documentation was installed). ===== Message from ca_root_nss-3.89: -- FreeBSD does not, and can not warrant that the certification authorities whose certificates are included in this package have in any way been audited for trustworthiness or RFC 3647 compliance. Assessment and verification of trust is the complete responsibility of the system administrator. This package installs symlinks to support root certificates discovery by default for software that uses OpenSSL. This enables SSL Certificate Verification by client software without manual intervention. If you prefer to do this manually, replace the following symlinks with either an empty file or your site-local certificate bundle. * /etc/ssl/cert.pem * /usr/local/etc/ssl/cert.pem * /usr/local/openssl/cert.pem ===== Message from openmpi-4.1.5: -- ===> NOTICE: The openmpi port currently does not have a maintainer. As a result, it is more likely to have unresolved issues, not be up-to-date, or even be removed in the future. To volunteer to maintain this port, please create an issue at: https://bugs.freebsd.org/bugzilla More information about port maintainership is available at: https://docs.freebsd.org/en/articles/contributing/#ports-contributing ===== Message from wayland-1.21.0: -- Wayland requires XDG_RUNTIME_DIR to be defined to a path that will contain "wayland-%d" unix(4) sockets. This is usually handled by consolekit2 (via ck-launch-session) or pam_xdg (via login). ===== Message from libxkbcommon-1.5.0: -- If arrow keys don't work under X11 switch to legacy rules e.g., For sh/bash/ksh/zsh run and (optionally) add into ~/.profile: export XKB_DEFAULT_RULES=xorg For csh/tcsh run and (optionally) add into ~/.login: setenv XKB_DEFAULT_RULES xorg ===== Message from dejavu-2.37_1: -- Make sure that the freetype module is loaded. If it is not, add the following line to the "Modules" section of your X Windows configuration file: Load "freetype" Add the following line to the "Files" section of X Windows configuration file: FontPath "/usr/local/share/fonts/dejavu/" Note: your X Windows configuration file is typically /etc/X11/XF86Config if you are using XFree86, and /etc/X11/xorg.conf if you are using X.Org. ===== Message from qt5-sql-5.15.8p157: -- To enable Qt database support, install the database plugin ports. The following plugin ports are available: - databases/qt5-sqldrivers-ibase InterBase/Firebird - databases/qt5-sqldrivers-mysql MySQL - databases/qt5-sqldrivers-odbc Open Database Connectivity - databases/qt5-sqldrivers-pgsql PostgreSQL - databases/qt5-sqldrivers-sqlite2 SQLite 2 - databases/qt5-sqldrivers-sqlite3 SQLite 3 - databases/qt5-sqldrivers-tds FreeTDS ===> elastix-5.1.0 depends on shared library: libITKCommon-5.3.so - found (/usr/local/lib/libITKCommon-5.3.so) ===> Returning to build of elastix-5.1.0 ===> elastix-5.1.0 depends on shared library: libvnl.so - found (/usr/local/lib/libvnl.so) =========================================================================== =======================<phase: configure >============================ ===> Configuring for elastix-5.1.0 ===> Performing out-of-source build /bin/mkdir -p /wrkdirs/usr/ports/graphics/elastix/work/.build -- The C compiler identification is Clang 13.0.0 -- The CXX compiler identification is Clang 13.0.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Failed -- Looking for pthread_create in pthreads -- Looking for pthread_create in pthreads - not found -- Looking for pthread_create in pthread -- Looking for pthread_create in pthread - found -- Found Threads: TRUE -- Found OpenGL: /usr/local/lib/libOpenGL.so found components: OpenGL GLX -- Found Python3: /usr/local/bin/python3.9 (found suitable version "3.9.16", minimum required is "3.9") found components: Interpreter Development.Module Development.Embed -- Found HDF5: hdf5-shared (found version "1.12.2") found components: C HL -- Found NetCDF: netcdf (found version "4.9.0") -- Found ZLIB: /usr/lib/libz.so (found version "1.2.12") -- Found PNG: /usr/local/lib/libpng.so (found version "1.6.39") -- Found MPI_C: /usr/local/mpi/openmpi/lib/libmpi.so (found version "3.1") -- Found MPI: TRUE (found version "3.1") found components: C -- Found X11: /usr/local/include -- Looking for XOpenDisplay in /usr/local/lib/libX11.so;/usr/local/lib/libXext.so -- Looking for XOpenDisplay in /usr/local/lib/libX11.so;/usr/local/lib/libXext.so - found -- Looking for gethostbyname -- Looking for gethostbyname - found -- Looking for connect -- Looking for connect - found -- Looking for remove -- Looking for remove - found -- Looking for shmat -- Looking for shmat - found -- Looking for IceConnectionNumber in ICE -- Looking for IceConnectionNumber in ICE - found -- Found EXPAT: /usr/local/lib/libexpat.so (found version "2.5.0") -- Found JPEG: /usr/local/lib/libjpeg.so (found version "80") -- Found TIFF: /usr/local/lib/libtiff.so (found version "4.4.0") -- Found Freetype: /usr/local/lib/libfreetype.so (found version "2.12.1") CMake Error at /wrkdirs/usr/ports/graphics/elastix/work/.build/CMakeFiles/CMakeTmp/CMakeLists.txt:16 (add_executable): No SOURCES given to target: cmTC_f109b CMake Error at /usr/local/share/cmake/Modules/FindOpenMP.cmake:261 (try_compile): Failed to generate test project build system. Call Stack (most recent call first): /usr/local/share/cmake/Modules/FindOpenMP.cmake:537 (_OPENMP_GET_FLAGS) CMakeLists.txt:123 (find_package) -- Configuring incomplete, errors occurred! See also "/wrkdirs/usr/ports/graphics/elastix/work/.build/CMakeFiles/CMakeOutput.log". See also "/wrkdirs/usr/ports/graphics/elastix/work/.build/CMakeFiles/CMakeError.log". *** Error code 1 Stop. make: stopped in /usr/ports/graphics/elastix