[package - 131releng-armv7-default][graphics/elastix] Failed for elastix-5.1.0 in configure

From: <pkg-fallout_at_FreeBSD.org>
Date: Sun, 09 Apr 2023 00:57:16 UTC
You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer:     yuri@FreeBSD.org
Log URL:        https://pkg-status.freebsd.org/ampere3/data/131releng-armv7-default/6eeeb3bd99c4/logs/elastix-5.1.0.log
Build URL:      https://pkg-status.freebsd.org/ampere3/build.html?mastername=131releng-armv7-default&build=6eeeb3bd99c4
Log:

=>> Building graphics/elastix
build started at Sun Apr  9 00:55:59 UTC 2023
port directory: /usr/ports/graphics/elastix
package name: elastix-5.1.0
building for: FreeBSD 131releng-armv7-default-job-12 13.1-RELEASE-p7 FreeBSD 13.1-RELEASE-p7 1301000 arm
maintained by: yuri@FreeBSD.org
Makefile ident: 
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yuri@FreeBSD.org
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XDG_DATA_HOME=/wrkdirs/usr/ports/graphics/elastix/work  XDG_CONFIG_HOME=/wrkdirs/usr/ports/graphics/elastix/work  XDG_CACHE_HOME=/wrkdirs/usr/ports/graphics/elastix/work/.cache  HOME=/wrkdirs/usr/ports/graphics/elastix/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/graphics/elastix/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/graphics/elastix/work/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig SHELL=/bin/sh CONFIG_SHELL=/bin/sh
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NINJA_STATUS="[%p %s/%t] " XDG_DATA_HOME=/wrkdirs/usr/ports/graphics/elastix/work  XDG_CONFIG_HOME=/wrkdirs/usr/ports/graphics/elastix/work  XDG_CACHE_HOME=/wrkdirs/usr/ports/graphics/elastix/work/.cache  HOME=/wrkdirs/usr/ports/graphics/elastix/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/graphics/elastix/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/graphics/elastix/work/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES DESTDIR=/wrkdirs/usr/ports/graphics/elastix/work/stage PREFIX=/usr/local  LOCALBASE=/usr/local  CC="cc" CFLAGS="-O2 -pipe  -fstack-protector-strong -fno-strict-aliasing "  CPP="cpp" CPPFLAGS=""  LDFLAGS=" -fstack-protector-strong " LIBS=""  CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing  -I/usr/local/include/double-conversion "  MANPREFIX="/usr/local" BSD_INSTALL_PR
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=======================<phase: check-sanity   >============================
===>  License APACHE20 accepted by the user
===========================================================================
=======================<phase: pkg-depends    >============================
===>   elastix-5.1.0 depends on file: /usr/local/sbin/pkg - not found
===>   Installing existing package /packages/All/pkg-1.19.1_1.pkg
[131releng-armv7-default-job-12] Installing pkg-1.19.1_1...
[131releng-armv7-default-job-12] Extracting pkg-1.19.1_1: .......... done
===>   elastix-5.1.0 depends on file: /usr/local/sbin/pkg - found
===>   Returning to build of elastix-5.1.0
===========================================================================
=======================<phase: fetch-depends  >============================
===========================================================================
=======================<phase: fetch          >============================
===>  License APACHE20 accepted by the user
===> Fetching all distfiles required by elastix-5.1.0 for building
===========================================================================
=======================<phase: checksum       >============================
===>  License APACHE20 accepted by the user
===> Fetching all distfiles required by elastix-5.1.0 for building
=> SHA256 Checksum OK for SuperElastix-elastix-5.1.0_GH0.tar.gz.
===========================================================================
=======================<phase: extract-depends>============================
===========================================================================
=======================<phase: extract        >============================
===>  License APACHE20 accepted by the user
===> Fetching all distfiles required by elastix-5.1.0 for building
===>  Extracting for elastix-5.1.0
=> SHA256 Checksum OK for SuperElastix-elastix-5.1.0_GH0.tar.gz.
===========================================================================
=======================<phase: patch-depends  >============================
===========================================================================
=======================<phase: patch          >============================
===>  Patching for elastix-5.1.0
===========================================================================
=======================<phase: build-depends  >============================
===>   elastix-5.1.0 depends on file: /usr/local/bin/cmake - not found
===>   Installing existing package /packages/All/cmake-core-3.25.1.pkg
[131releng-armv7-default-job-12] Installing cmake-core-3.25.1...
[131releng-armv7-default-job-12] `-- Installing expat-2.5.0...
[131releng-armv7-default-job-12] `-- Extracting expat-2.5.0: .......... done
[131releng-armv7-default-job-12] `-- Installing jsoncpp-1.9.5...
[131releng-armv7-default-job-12] `-- Extracting jsoncpp-1.9.5: .......... done
[131releng-armv7-default-job-12] `-- Installing libuv-1.44.2...
[131releng-armv7-default-job-12] `-- Extracting libuv-1.44.2: .......... done
[131releng-armv7-default-job-12] `-- Installing rhash-1.4.3...
[131releng-armv7-default-job-12] |   `-- Installing gettext-runtime-0.21.1...
[131releng-armv7-default-job-12] |   | `-- Installing indexinfo-0.3.1...
[131releng-armv7-default-job-12] |   | `-- Extracting indexinfo-0.3.1: .... done
[131releng-armv7-default-job-12] |   `-- Extracting gettext-runtime-0.21.1: .......... done
[131releng-armv7-default-job-12] `-- Extracting rhash-1.4.3: .......... done
[131releng-armv7-default-job-12] Extracting cmake-core-3.25.1: .......... done
<snip>
===>   NOTICE:

The fftw port currently does not have a maintainer. As a result, it is
more likely to have unresolved issues, not be up-to-date, or even be removed in
the future. To volunteer to maintain this port, please create an issue at:

https://bugs.freebsd.org/bugzilla

More information about port maintainership is available at:

https://docs.freebsd.org/en/articles/contributing/#ports-contributing
=====
Message from freetype2-2.12.1_2:

--
The 2.7.x series now uses the new subpixel hinting mode (V40 port's option) as
the default, emulating a modern version of ClearType. This change inevitably
leads to different rendering results, and you might change port's options to
adapt it to your taste (or use the new "FREETYPE_PROPERTIES" environment
variable).

The environment variable "FREETYPE_PROPERTIES" can be used to control the
driver properties. Example:

FREETYPE_PROPERTIES=truetype:interpreter-version=35 \
	cff:no-stem-darkening=1 \
	autofitter:warping=1

This allows to select, say, the subpixel hinting mode at runtime for a given
application.

If LONG_PCF_NAMES port's option was enabled, the PCF family names may include
the foundry and information whether they contain wide characters. For example,
"Sony Fixed" or "Misc Fixed Wide", instead of "Fixed". This can be disabled at
run time with using pcf:no-long-family-names property, if needed. Example:

FREETYPE_PROPERTIES=pcf:no-long-family-names=1

How to recreate fontconfig cache with using such environment variable,
if needed:
# env FREETYPE_PROPERTIES=pcf:no-long-family-names=1 fc-cache -fsv

The controllable properties are listed in the section "Controlling FreeType
Modules" in the reference's table of contents
(/usr/local/share/doc/freetype2/reference/index.html, if documentation was installed).
=====
Message from ca_root_nss-3.89:

--
FreeBSD does not, and can not warrant that the certification authorities
whose certificates are included in this package have in any way been
audited for trustworthiness or RFC 3647 compliance.

Assessment and verification of trust is the complete responsibility of the
system administrator.


This package installs symlinks to support root certificates discovery by
default for software that uses OpenSSL.

This enables SSL Certificate Verification by client software without manual
intervention.

If you prefer to do this manually, replace the following symlinks with
either an empty file or your site-local certificate bundle.

  * /etc/ssl/cert.pem
  * /usr/local/etc/ssl/cert.pem
  * /usr/local/openssl/cert.pem
=====
Message from openmpi-4.1.5:

--
===>   NOTICE:

The openmpi port currently does not have a maintainer. As a result, it is
more likely to have unresolved issues, not be up-to-date, or even be removed in
the future. To volunteer to maintain this port, please create an issue at:

https://bugs.freebsd.org/bugzilla

More information about port maintainership is available at:

https://docs.freebsd.org/en/articles/contributing/#ports-contributing
=====
Message from wayland-1.21.0:

--
Wayland requires XDG_RUNTIME_DIR to be defined to a path that will
contain "wayland-%d" unix(4) sockets. This is usually handled by
consolekit2 (via ck-launch-session) or pam_xdg (via login).
=====
Message from libxkbcommon-1.5.0:

--
If arrow keys don't work under X11 switch to legacy rules e.g.,

For sh/bash/ksh/zsh run and (optionally) add into ~/.profile:
  export XKB_DEFAULT_RULES=xorg

For csh/tcsh run and (optionally) add into ~/.login:
  setenv XKB_DEFAULT_RULES xorg
=====
Message from dejavu-2.37_1:

--
Make sure that the freetype module is loaded.  If it is not, add the following
line to the "Modules" section of your X Windows configuration file:

	Load "freetype"

Add the following line to the "Files" section of X Windows configuration file:

	FontPath "/usr/local/share/fonts/dejavu/"

Note: your X Windows configuration file is typically /etc/X11/XF86Config
if you are using XFree86, and /etc/X11/xorg.conf if you are using X.Org.
=====
Message from qt5-sql-5.15.8p157:

--
To enable Qt database support, install the database plugin ports. The
following plugin ports are available:
 - databases/qt5-sqldrivers-ibase	InterBase/Firebird
 - databases/qt5-sqldrivers-mysql	MySQL
 - databases/qt5-sqldrivers-odbc	Open Database Connectivity
 - databases/qt5-sqldrivers-pgsql	PostgreSQL
 - databases/qt5-sqldrivers-sqlite2	SQLite 2
 - databases/qt5-sqldrivers-sqlite3	SQLite 3
 - databases/qt5-sqldrivers-tds		FreeTDS
===>   elastix-5.1.0 depends on shared library: libITKCommon-5.3.so - found (/usr/local/lib/libITKCommon-5.3.so)
===>   Returning to build of elastix-5.1.0
===>   elastix-5.1.0 depends on shared library: libvnl.so - found (/usr/local/lib/libvnl.so)
===========================================================================
=======================<phase: configure      >============================
===>  Configuring for elastix-5.1.0
===>  Performing out-of-source build
/bin/mkdir -p /wrkdirs/usr/ports/graphics/elastix/work/.build
-- The C compiler identification is Clang 13.0.0
-- The CXX compiler identification is Clang 13.0.0
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /usr/bin/cc - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /usr/bin/c++ - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Failed
-- Looking for pthread_create in pthreads
-- Looking for pthread_create in pthreads - not found
-- Looking for pthread_create in pthread
-- Looking for pthread_create in pthread - found
-- Found Threads: TRUE  
-- Found OpenGL: /usr/local/lib/libOpenGL.so  found components: OpenGL GLX 
-- Found Python3: /usr/local/bin/python3.9 (found suitable version "3.9.16", minimum required is "3.9") found components: Interpreter Development.Module Development.Embed 
-- Found HDF5: hdf5-shared (found version "1.12.2") found components: C HL 
-- Found NetCDF: netcdf (found version "4.9.0") 
-- Found ZLIB: /usr/lib/libz.so (found version "1.2.12") 
-- Found PNG: /usr/local/lib/libpng.so (found version "1.6.39") 
-- Found MPI_C: /usr/local/mpi/openmpi/lib/libmpi.so (found version "3.1") 
-- Found MPI: TRUE (found version "3.1") found components: C 
-- Found X11: /usr/local/include   
-- Looking for XOpenDisplay in /usr/local/lib/libX11.so;/usr/local/lib/libXext.so
-- Looking for XOpenDisplay in /usr/local/lib/libX11.so;/usr/local/lib/libXext.so - found
-- Looking for gethostbyname
-- Looking for gethostbyname - found
-- Looking for connect
-- Looking for connect - found
-- Looking for remove
-- Looking for remove - found
-- Looking for shmat
-- Looking for shmat - found
-- Looking for IceConnectionNumber in ICE
-- Looking for IceConnectionNumber in ICE - found
-- Found EXPAT: /usr/local/lib/libexpat.so (found version "2.5.0") 
-- Found JPEG: /usr/local/lib/libjpeg.so (found version "80") 
-- Found TIFF: /usr/local/lib/libtiff.so (found version "4.4.0")  
-- Found Freetype: /usr/local/lib/libfreetype.so (found version "2.12.1") 
CMake Error at /wrkdirs/usr/ports/graphics/elastix/work/.build/CMakeFiles/CMakeTmp/CMakeLists.txt:16 (add_executable):
  No SOURCES given to target: cmTC_6f9a4


CMake Error at /usr/local/share/cmake/Modules/FindOpenMP.cmake:261 (try_compile):
  Failed to generate test project build system.
Call Stack (most recent call first):
  /usr/local/share/cmake/Modules/FindOpenMP.cmake:537 (_OPENMP_GET_FLAGS)
  CMakeLists.txt:123 (find_package)


-- Configuring incomplete, errors occurred!
See also "/wrkdirs/usr/ports/graphics/elastix/work/.build/CMakeFiles/CMakeOutput.log".
See also "/wrkdirs/usr/ports/graphics/elastix/work/.build/CMakeFiles/CMakeError.log".
*** Error code 1

Stop.
make: stopped in /usr/ports/graphics/elastix