[package - main-amd64-default][math/R-cran-sf] Failed for R-cran-sf-1.0.8_1 in stage
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Date: Sat, 03 Sep 2022 05:14:52 UTC
You are receiving this mail as a port that you maintain is failing to build on the FreeBSD package build server. Please investigate the failure and submit a PR to fix build. Maintainer: tota@FreeBSD.org Log URL: http://beefy18.nyi.freebsd.org/data/main-amd64-default/pcfc19930a459_se120d3b2d4/logs/R-cran-sf-1.0.8_1.log Build URL: http://beefy18.nyi.freebsd.org/build.html?mastername=main-amd64-default&build=pcfc19930a459_se120d3b2d4 Log: =>> Building math/R-cran-sf build started at Sat Sep 3 05:12:10 UTC 2022 port directory: /usr/ports/math/R-cran-sf package name: R-cran-sf-1.0.8_1 building for: FreeBSD main-amd64-default-job-06 14.0-CURRENT FreeBSD 14.0-CURRENT 1400066 amd64 maintained by: tota@FreeBSD.org Makefile ident: Poudriere version: 3.2.8-21-g883afb07 Host OSVERSION: 1400063 Jail OSVERSION: 1400066 Job Id: 06 !!! Jail is newer than host. (Jail: 1400066, Host: 1400063) !!! !!! This is not supported. !!! !!! Host kernel must be same or newer than jail. !!! !!! Expect build failures. !!! ---Begin Environment--- SHELL=/bin/sh OSVERSION=1400066 UNAME_v=FreeBSD 14.0-CURRENT 1400066 UNAME_r=14.0-CURRENT BLOCKSIZE=K MAIL=/var/mail/root MM_CHARSET=UTF-8 LANG=C.UTF-8 STATUS=1 HOME=/root PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin LOCALBASE=/usr/local USER=root LIBEXECPREFIX=/usr/local/libexec/poudriere POUDRIERE_VERSION=3.2.8-21-g883afb07 MASTERMNT=/usr/local/poudriere/data/.m/main-amd64-default/ref POUDRIERE_BUILD_TYPE=bulk PACKAGE_BUILDING=yes SAVED_TERM= PWD=/usr/local/poudriere/data/.m/main-amd64-default/ref/.p/pool P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS MASTERNAME=main-amd64-default SCRIPTPREFIX=/usr/local/share/poudriere OLDPWD=/usr/local/poudriere/data/.m/main-amd64-default/ref/.p SCRIPTPATH=/usr/local/share/poudriere/bulk.sh POUDRIEREPATH=/usr/local/bin/poudriere ---End Environment--- ---Begin Poudriere Port Flags/Env--- PORT_FLAGS= PKGENV= FLAVOR= DEPENDS_ARGS= MAKE_ARGS= ---End Poudriere Port Flags/Env--- ---Begin OPTIONS List--- ---End OPTIONS List--- --MAINTAINER-- tota@FreeBSD.org --End MAINTAINER-- --CONFIGURE_ARGS-- "--with-proj-api=yes" --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- F77="gfortran11" FC="gfortran11" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc11" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc11" PKG_CONFIG=pkgconf XDG_DATA_HOME=/wrkdirs/usr/ports/math/R-cran-sf/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/math/R-cran-sf/work XDG_CACHE_HOME=/wrkdirs/usr/ports/math/R-cran-sf/work/.cache HOME=/wrkdirs/usr/ports/math/R-cran-sf/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/math/R-cran-sf/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/math/R-cran-sf/work/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig SHELL=/bin/sh CONFIG_SHELL=/bin/sh --End CONFIGURE_ENV-- --MAKE_ENV-- F77="gfortran11" FC="gfortran11" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc11" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc11" XDG_DATA_HOME=/wrkdirs/usr/ports/math/R-cran-sf/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/math/R-cran-sf/work XDG_CACHE_HOME=/wrkdirs/usr/ports/math/R-cran-sf/work/.cache HOME=/wrkdirs/usr/ports/math/R-cran-sf/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/math/R-cran-sf/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/math/R-cran-sf/work/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES ADDR2LINE="/usr/local/bin/addr2line" AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" RANLIB="/usr/local/bin/ranlib" READELF="/usr/loca l/bin/readelf" SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" PREFIX=/usr/local LOCALBASE=/usr/local CC="cc" CFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " CPP="cpp" CPPFLAGS="" LDFLAGS=" -Wl,-rpath=/usr/local/lib/gcc11 -L/usr/local/lib/gcc11 -B/usr/local/bin -fstack-protector-strong " LIBS="" CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" --End MAKE_ENV-- --PLIST_SUB-- R_MOD_DIR=lib/R/library/sf OSREL=14.0 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/sf" EXAMPLESDIR="share/examples/sf" DATADIR="share/sf" WWWDIR="www/sf" ETCDIR="etc/sf" --End PLIST_SUB-- --SUB_LIST-- PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/sf DOCSDIR=/usr/local/share/doc/sf EXAMPLESDIR=/usr/local/share/examples/sf WWWDIR=/usr/local/www/sf ETCDIR=/usr/local/etc/sf --End SUB_LIST-- ---Begin make.conf--- USE_PACKAGE_DEPENDS=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles PACKAGE_BUILDING=yes PACKAGE_BUILDING_FLAVORS=yes #### /usr/local/etc/poudriere.d/make.conf #### # XXX: We really need this but cannot use it while 'make checksum' does not # try the next mirror on checksum failure. 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[main-amd64-default-job-06] Extracting pkg-1.18.4: .......... done ===> R-cran-sf-1.0.8_1 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of R-cran-sf-1.0.8_1 =========================================================================== =======================<phase: fetch-depends >============================ =========================================================================== =======================<phase: fetch >============================ ===> License GPLv2 MIT accepted by the user ===> Fetching all distfiles required by R-cran-sf-1.0.8_1 for building =========================================================================== =======================<phase: checksum >============================ ===> License GPLv2 MIT accepted by the user ===> Fetching all distfiles required by R-cran-sf-1.0.8_1 for building => SHA256 Checksum OK for sf_1.0-8.tar.gz. =========================================================================== =======================<phase: extract-depends>============================ =========================================================================== =======================<phase: extract >============================ ===> License GPLv2 MIT accepted by the user ===> Fetching all distfiles required by R-cran-sf-1.0.8_1 for building ===> Extracting for R-cran-sf-1.0.8_1 => SHA256 Checksum OK for sf_1.0-8.tar.gz. =========================================================================== =======================<phase: patch-depends >============================ =========================================================================== =======================<phase: patch >============================ ===> Patching for R-cran-sf-1.0.8_1 =========================================================================== =======================<phase: build-depends >============================ ===> R-cran-sf-1.0.8_1 depends on package: R-cran-classInt>=0.4.1 - not found ===> Installing existing package /packages/All/R-cran-classInt-0.4.7.pkg [main-amd64-default-job-06] Installing R-cran-classInt-0.4.7... [main-amd64-default-job-06] `-- Installing R-4.2.1... [main-amd64-default-job-06] | `-- Installing cairo-1.17.4_1,3... [main-amd64-default-job-06] | | `-- Installing fontconfig-2.13.94_2,1... [main-amd64-default-job-06] | | `-- Installing expat-2.4.8... [main-amd64-default-job-06] | | `-- Extracting expat-2.4.8: .......... done [main-amd64-default-job-06] | | `-- Installing freetype2-2.12.1_2... <snip> [main-amd64-default-job-06] `-- Extracting netcdf-4.9.0_1: .......... done [main-amd64-default-job-06] `-- Installing poppler-22.08.0_1... [main-amd64-default-job-06] | `-- Installing nspr-4.34.1... [main-amd64-default-job-06] | `-- Extracting nspr-4.34.1: .......... done [main-amd64-default-job-06] | `-- Installing nss-3.82... [main-amd64-default-job-06] | `-- Extracting nss-3.82: .......... done [main-amd64-default-job-06] `-- Extracting poppler-22.08.0_1: .......... done [main-amd64-default-job-06] `-- Installing postgresql13-client-13.8... [main-amd64-default-job-06] `-- Extracting postgresql13-client-13.8: .......... done [main-amd64-default-job-06] `-- Installing qhull-8.0.2_1,1... [main-amd64-default-job-06] `-- Extracting qhull-8.0.2_1,1: .......... done [main-amd64-default-job-06] `-- Installing sfcgal-1.4.1_2... [main-amd64-default-job-06] `-- Extracting sfcgal-1.4.1_2: .......... done [main-amd64-default-job-06] `-- Installing spatialite-5.0.1_2... [main-amd64-default-job-06] | `-- Installing librttopo-1.1.0... [main-amd64-default-job-06] | `-- Extracting librttopo-1.1.0: .......... done [main-amd64-default-job-06] `-- Extracting spatialite-5.0.1_2: .......... done [main-amd64-default-job-06] `-- Installing webp-1.2.4... [main-amd64-default-job-06] `-- Extracting webp-1.2.4: .......... done [main-amd64-default-job-06] `-- Installing xerces-c3-3.2.3... [main-amd64-default-job-06] `-- Extracting xerces-c3-3.2.3: .......... done [main-amd64-default-job-06] Extracting gdal-3.5.1_3: .......... done ===== Message from boost-libs-1.80.0: -- You have built the Boost library with thread support. Don't forget to add -pthread to your linker options when linking your code. ===== Message from postgresql13-client-13.8: -- The PostgreSQL port has a collection of "side orders": postgresql-docs For all of the html documentation p5-Pg A perl5 API for client access to PostgreSQL databases. postgresql-tcltk If you want tcl/tk client support. postgresql-jdbc For Java JDBC support. postgresql-odbc For client access from unix applications using ODBC as access method. Not needed to access unix PostgreSQL servers from Win32 using ODBC. See below. ruby-postgres, py-psycopg2 For client access to PostgreSQL databases using the ruby & python languages. postgresql-plperl, postgresql-pltcl & postgresql-plruby For using perl5, tcl & ruby as procedural languages. postgresql-contrib Lots of contributed utilities, postgresql functions and datatypes. There you find pg_standby, pgcrypto and many other cool things. etc... ===> R-cran-sf-1.0.8_1 depends on shared library: libgdal.so - found (/usr/local/lib/libgdal.so) ===> Returning to build of R-cran-sf-1.0.8_1 ===> R-cran-sf-1.0.8_1 depends on shared library: libgeos.so - found (/usr/local/lib/libgeos.so) ===> R-cran-sf-1.0.8_1 depends on shared library: libproj.so - found (/usr/local/lib/libproj.so) =========================================================================== =======================<phase: configure >============================ ===> Configuring for R-cran-sf-1.0.8_1 =========================================================================== =======================<phase: build >============================ =========================================================================== =======================<phase: run-depends >============================ ===> R-cran-sf-1.0.8_1 depends on package: R-cran-classInt>=0.4.1 - found ===> R-cran-sf-1.0.8_1 depends on package: R-cran-DBI>=0.8 - found ===> R-cran-sf-1.0.8_1 depends on package: R-cran-magrittr>0 - found ===> R-cran-sf-1.0.8_1 depends on package: R-cran-Rcpp>=0.12.18 - found ===> R-cran-sf-1.0.8_1 depends on package: R-cran-s2>=1.0.7 - found ===> R-cran-sf-1.0.8_1 depends on package: R-cran-units>=0.7.0 - found ===> R-cran-sf-1.0.8_1 depends on file: /usr/local/bin/R - found ===> R-cran-sf-1.0.8_1 depends on executable: gfortran11 - found =========================================================================== =======================<phase: stage >============================ ===> Staging for R-cran-sf-1.0.8_1 ===> Generating temporary packing list * installing *source* package 'sf' ... ** package 'sf' successfully unpacked and MD5 sums checked ** using staged installation configure: CC: cc configure: CXX: c++ checking for gdal-config... /usr/local/bin/gdal-config checking gdal-config usability... yes configure: GDAL: 3.5.1 checking GDAL version >= 2.0.1... yes checking for gcc... cc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether cc accepts -g... yes checking for cc option to accept ISO C89... none needed checking how to run the C preprocessor... cpp checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking gdal.h usability... yes checking gdal.h presence... yes checking for gdal.h... yes checking GDAL: linking with --libs only... yes checking GDAL: /usr/local/share/gdal/pcs.csv readable... no checking GDAL: checking whether PROJ is available for linking:... yes checking GDAL: checking whether PROJ is available fur running:... yes configure: GDAL: 3.5.1 configure: pkg-config proj exists, will use it configure: using proj.h. configure: PROJ: 8.2.1 checking PROJ: checking whether PROJ and sqlite3 are available for linking:... yes checking for geos-config... /usr/local/bin/geos-config checking geos-config usability... yes configure: GEOS: 3.11.0 checking GEOS version >= 3.4.0... yes checking geos_c.h usability... yes checking geos_c.h presence... yes checking for geos_c.h... yes checking geos: linking with -L/usr/local/lib -lgeos_c... yes configure: Package CPP flags: -I/usr/local/include -DHAVE_PROJ_H -I/usr/local/include -I/usr/local/include configure: Package LIBS: -L/usr/local/lib -lproj -L/usr/local/lib -lgdal -L/usr/local/lib -lgeos_c configure: creating ./config.status config.status: creating src/Makevars ** libs gmake[1]: Entering directory '/wrkdirs/usr/ports/math/R-cran-sf/work/sf/src' c++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -DHAVE_PROJ_H -I/usr/local/include -I/usr/local/include -I'/usr/local/lib/R/library/Rcpp/include' -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -O2 -pipe -DLIBICONV_PLUG -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -DLIBICONV_PLUG -isystem /usr/local/include -c RcppExports.cpp -o RcppExports.o c++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -DHAVE_PROJ_H -I/usr/local/include -I/usr/local/include -I'/usr/local/lib/R/library/Rcpp/include' -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -O2 -pipe -DLIBICONV_PLUG -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -DLIBICONV_PLUG -isystem /usr/local/include -c bbox.cpp -o bbox.o c++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -DHAVE_PROJ_H -I/usr/local/include -I/usr/local/include -I'/usr/local/lib/R/library/Rcpp/include' -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -O2 -pipe -DLIBICONV_PLUG -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -DLIBICONV_PLUG -isystem /usr/local/include -c gdal.cpp -o gdal.o c++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -DHAVE_PROJ_H -I/usr/local/include -I/usr/local/include -I'/usr/local/lib/R/library/Rcpp/include' -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -O2 -pipe -DLIBICONV_PLUG -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -DLIBICONV_PLUG -isystem /usr/local/include -c gdal_geom.cpp -o gdal_geom.o c++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -DHAVE_PROJ_H -I/usr/local/include -I/usr/local/include -I'/usr/local/lib/R/library/Rcpp/include' -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -O2 -pipe -DLIBICONV_PLUG -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -DLIBICONV_PLUG -isystem /usr/local/include -c gdal_read.cpp -o gdal_read.o c++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -DHAVE_PROJ_H -I/usr/local/include -I/usr/local/include -I'/usr/local/lib/R/library/Rcpp/include' -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -O2 -pipe -DLIBICONV_PLUG -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -DLIBICONV_PLUG -isystem /usr/local/include -c gdal_utils.cpp -o gdal_utils.o c++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -DHAVE_PROJ_H -I/usr/local/include -I/usr/local/include -I'/usr/local/lib/R/library/Rcpp/include' -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -O2 -pipe -DLIBICONV_PLUG -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -DLIBICONV_PLUG -isystem /usr/local/include -c gdal_write.cpp -o gdal_write.o c++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -DHAVE_PROJ_H -I/usr/local/include -I/usr/local/include -I'/usr/local/lib/R/library/Rcpp/include' -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -O2 -pipe -DLIBICONV_PLUG -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -DLIBICONV_PLUG -isystem /usr/local/include -c geos.cpp -o geos.o c++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -DHAVE_PROJ_H -I/usr/local/include -I/usr/local/include -I'/usr/local/lib/R/library/Rcpp/include' -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -O2 -pipe -DLIBICONV_PLUG -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -DLIBICONV_PLUG -isystem /usr/local/include -c hex.cpp -o hex.o c++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -DHAVE_PROJ_H -I/usr/local/include -I/usr/local/include -I'/usr/local/lib/R/library/Rcpp/include' -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -O2 -pipe -DLIBICONV_PLUG -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -DLIBICONV_PLUG -isystem /usr/local/include -c mdim.cpp -o mdim.o c++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -DHAVE_PROJ_H -I/usr/local/include -I/usr/local/include -I'/usr/local/lib/R/library/Rcpp/include' -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -O2 -pipe -DLIBICONV_PLUG -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -DLIBICONV_PLUG -isystem /usr/local/include -c ops.cpp -o ops.o c++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -DHAVE_PROJ_H -I/usr/local/include -I/usr/local/include -I'/usr/local/lib/R/library/Rcpp/include' -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -O2 -pipe -DLIBICONV_PLUG -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -DLIBICONV_PLUG -isystem /usr/local/include -c polygonize.cpp -o polygonize.o c++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -DHAVE_PROJ_H -I/usr/local/include -I/usr/local/include -I'/usr/local/lib/R/library/Rcpp/include' -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -O2 -pipe -DLIBICONV_PLUG -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -DLIBICONV_PLUG -isystem /usr/local/include -c proj.cpp -o proj.o c++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -DHAVE_PROJ_H -I/usr/local/include -I/usr/local/include -I'/usr/local/lib/R/library/Rcpp/include' -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -O2 -pipe -DLIBICONV_PLUG -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -DLIBICONV_PLUG -isystem /usr/local/include -c proj_info.cpp -o proj_info.o c++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -DHAVE_PROJ_H -I/usr/local/include -I/usr/local/include -I'/usr/local/lib/R/library/Rcpp/include' -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -O2 -pipe -DLIBICONV_PLUG -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -DLIBICONV_PLUG -isystem /usr/local/include -c raster2sf.cpp -o raster2sf.o c++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -DHAVE_PROJ_H -I/usr/local/include -I/usr/local/include -I'/usr/local/lib/R/library/Rcpp/include' -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -O2 -pipe -DLIBICONV_PLUG -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -DLIBICONV_PLUG -isystem /usr/local/include -c sfc-sfg.cpp -o sfc-sfg.o c++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -DHAVE_PROJ_H -I/usr/local/include -I/usr/local/include -I'/usr/local/lib/R/library/Rcpp/include' -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -O2 -pipe -DLIBICONV_PLUG -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -DLIBICONV_PLUG -isystem /usr/local/include -c signed_area.cpp -o signed_area.o c++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -DHAVE_PROJ_H -I/usr/local/include -I/usr/local/include -I'/usr/local/lib/R/library/Rcpp/include' -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -O2 -pipe -DLIBICONV_PLUG -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -DLIBICONV_PLUG -isystem /usr/local/include -c stars.cpp -o stars.o c++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -DHAVE_PROJ_H -I/usr/local/include -I/usr/local/include -I'/usr/local/lib/R/library/Rcpp/include' -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -O2 -pipe -DLIBICONV_PLUG -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -DLIBICONV_PLUG -isystem /usr/local/include -c wkb.cpp -o wkb.o c++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -DHAVE_PROJ_H -I/usr/local/include -I/usr/local/include -I'/usr/local/lib/R/library/Rcpp/include' -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -O2 -pipe -DLIBICONV_PLUG -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -DLIBICONV_PLUG -isystem /usr/local/include -c zm_range.cpp -o zm_range.o c++ -std=gnu++11 -shared -L/usr/local/lib/R/lib -L/usr/local/lib -Wl,-rpath=/usr/local/lib/gcc11 -L/usr/local/lib/gcc11 -B/usr/local/bin -fstack-protector-strong -o sf.so RcppExports.o bbox.o gdal.o gdal_geom.o gdal_read.o gdal_utils.o gdal_write.o geos.o hex.o mdim.o ops.o polygonize.o proj.o proj_info.o raster2sf.o sfc-sfg.o signed_area.o stars.o wkb.o zm_range.o -L/usr/local/lib -lproj -L/usr/local/lib -lgdal -L/usr/local/lib -lgeos_c -L/usr/local/lib/R/lib -lR gmake[1]: Leaving directory '/wrkdirs/usr/ports/math/R-cran-sf/work/sf/src' installing to /wrkdirs/usr/ports/math/R-cran-sf/work/stage/usr/local/lib/R/library/00LOCK-sf/00new/sf/libs ** R ** demo ** inst ** tests ** byte-compile and prepare package for lazy loading in method for 'dbWriteTable' with signature '"PostgreSQLConnection","character","sf"': no definition for class "PostgreSQLConnection" in method for 'dbDataType' with signature '"PostgreSQLConnection","sf"': no definition for class "PostgreSQLConnection" in method for 'coerce' with signature '"Spatial","sf"': no definition for class "Spatial" in method for 'coerce' with signature '"Spatial","sfc"': no definition for class "Spatial" in method for 'coerce' with signature '"sf","Spatial"': no definition for class "Spatial" in method for 'coerce' with signature '"sfc","Spatial"': no definition for class "Spatial" in method for 'coerce' with signature '"XY","Spatial"': no definition for class "Spatial" in method for 'coerce' with signature '"crs","CRS"': no definition for class "CRS" in method for 'coerce' with signature '"sgbp","sparseMatrix"': no definition for class "sparseMatrix" ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location Error: package or namespace load failed for 'sf' in dyn.load(file, DLLpath = DLLpath, ...): unable to load shared object '/wrkdirs/usr/ports/math/R-cran-sf/work/stage/usr/local/lib/R/library/00LOCK-sf/00new/sf/libs/sf.so': /usr/local/lib/libkmlregionator.so.1: Undefined symbol "_ZN14kmlconvenience11FeatureList11RegionSplitERKN5boost13intrusive_ptrIN6kmldom6RegionEEEmPS0_" Error: loading failed Execution halted ERROR: loading failed * removing '/wrkdirs/usr/ports/math/R-cran-sf/work/stage/usr/local/lib/R/library/sf' *** Error code 1 Stop. make: stopped in /usr/ports/math/R-cran-sf