[package - 131releng-armv7-default][science/py-pyscf] Failed for py39-pyscf-2.1.0 in build
- Go to: [ bottom of page ] [ top of archives ] [ this month ]
Date: Tue, 18 Oct 2022 11:59:54 UTC
You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.
Maintainer: yuri@FreeBSD.org
Log URL: http://ampere3.nyi.freebsd.org/data/131releng-armv7-default/9f2f3869d429/logs/py39-pyscf-2.1.0.log
Build URL: http://ampere3.nyi.freebsd.org/build.html?mastername=131releng-armv7-default&build=9f2f3869d429
Log:
=>> Building science/py-pyscf
build started at Tue Oct 18 11:59:15 UTC 2022
port directory: /usr/ports/science/py-pyscf
package name: py39-pyscf-2.1.0
building for: FreeBSD 131releng-armv7-default-job-08 13.1-RELEASE-p2 FreeBSD 13.1-RELEASE-p2 1301000 arm
maintained by: yuri@FreeBSD.org
Makefile ident:
Poudriere version: 3.2.8-21-g883afb07
Host OSVERSION: 1400063
Jail OSVERSION: 1301000
Job Id: 08
---Begin Environment---
SHELL=/bin/csh
OSVERSION=1301000
UNAME_v=FreeBSD 13.1-RELEASE-p2 1301000
UNAME_r=13.1-RELEASE-p2
BLOCKSIZE=K
MAIL=/var/mail/root
MM_CHARSET=UTF-8
LANG=C.UTF-8
STATUS=1
HOME=/root
PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin
LOCALBASE=/usr/local
USER=root
LIBEXECPREFIX=/usr/local/libexec/poudriere
POUDRIERE_VERSION=3.2.8-21-g883afb07
MASTERMNT=/usr/local/poudriere/data/.m/131releng-armv7-default/ref
POUDRIERE_BUILD_TYPE=bulk
PACKAGE_BUILDING=yes
SAVED_TERM=
PWD=/usr/local/poudriere/data/.m/131releng-armv7-default/ref/.p/pool
P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS
MASTERNAME=131releng-armv7-default
SCRIPTPREFIX=/usr/local/share/poudriere
OLDPWD=/usr/local/poudriere/data/.m/131releng-armv7-default/ref/.p
SCRIPTPATH=/usr/local/share/poudriere/bulk.sh
POUDRIEREPATH=/usr/local/bin/poudriere
---End Environment---
---Begin Poudriere Port Flags/Env---
PORT_FLAGS=
PKGENV=
FLAVOR=py39
DEPENDS_ARGS=
MAKE_ARGS= FLAVOR=py39
---End Poudriere Port Flags/Env---
---Begin OPTIONS List---
---End OPTIONS List---
--MAINTAINER--
yuri@FreeBSD.org
--End MAINTAINER--
--CONFIGURE_ARGS--
--End CONFIGURE_ARGS--
--CONFIGURE_ENV--
F77="gfortran11" FC="gfortran11" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc11" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc11" PYTHON="/usr/local/bin/python3.9" XDG_DATA_HOME=/wrkdirs/usr/ports/science/py-pyscf/work-py39 XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/py-pyscf/work-py39 XDG_CACHE_HOME=/wrkdirs/usr/ports/science/py-pyscf/work-py39/.cache HOME=/wrkdirs/usr/ports/science/py-pyscf/work-py39 TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/py-pyscf/work-py39/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/science/py-pyscf/work-py39/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig SHELL=/bin/sh CONFIG_SHELL=/bin/sh
--End CONFIGURE_ENV--
--MAKE_ENV--
F77="gfortran11" FC="gfortran11" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc11" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc11" XDG_DATA_HOME=/wrkdirs/usr/ports/science/py-pyscf/work-py39 XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/py-pyscf/work-py39 XDG_CACHE_HOME=/wrkdirs/usr/ports/science/py-pyscf/work-py39/.cache HOME=/wrkdirs/usr/ports/science/py-pyscf/work-py39 TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/py-pyscf/work-py39/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/science/py-pyscf/work-py39/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES ADDR2LINE="/usr/local/bin/addr2line" AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" RANLIB=
"/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" LDSHARED="cc -shared" PYTHONDONTWRITEBYTECODE= PYTHONOPTIMIZE= PREFIX=/usr/local LOCALBASE=/usr/local CC="cc" CFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " CPP="cpp" CPPFLAGS="" LDFLAGS=" -Wl,-rpath=/usr/local/lib/gcc11 -L/usr/local/lib/gcc11 -B/usr/local/bin -L/usr/local/lib -fstack-protector-strong " LIBS="" CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444"
--End MAKE_ENV--
--PLIST_SUB--
PYTHON_INCLUDEDIR=include/python3.9 PYTHON_LIBDIR=lib/python3.9 PYTHON_PLATFORM=freebsd13 PYTHON_SITELIBDIR=lib/python3.9/site-packages PYTHON_SUFFIX=39 PYTHON_EXT_SUFFIX=.cpython-39 PYTHON_VER=3.9 PYTHON_VERSION=python3.9 PYTHON2="@comment " PYTHON3="" OSREL=13.1 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/pyscf" EXAMPLESDIR="share/examples/pyscf" DATADIR="share/pyscf" WWWDIR="www/pyscf" ETCDIR="etc/pyscf"
--End PLIST_SUB--
--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/pyscf DOCSDIR=/usr/local/share/doc/pyscf EXAMPLESDIR=/usr/local/share/examples/pyscf WWWDIR=/usr/local/www/pyscf ETCDIR=/usr/local/etc/pyscf
--End SUB_LIST--
---Begin make.conf---
USE_PACKAGE_DEPENDS=yes
BATCH=yes
WRKDIRPREFIX=/wrkdirs
PORTSDIR=/usr/ports
PACKAGES=/packages
DISTDIR=/distfiles
PACKAGE_BUILDING=yes
PACKAGE_BUILDING_FLAVORS=yes
#### /usr/local/etc/poudriere.d/make.conf ####
# XXX: We really need this but cannot use it while 'make checksum' does not
# try the next mirror on checksum failure. It currently retries the same
# failed mirror and then fails rather then trying another. It *does*
# try the next if the size is mismatched though.
#MASTER_SITE_FREEBSD=yes
# Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs
MAKE_JOBS_NUMBER=2
#### /usr/ports/Mk/Scripts/ports_env.sh ####
_CCVERSION_921dbbb2=FreeBSD clang version 13.0.0 (git@github.com:llvm/llvm-project.git llvmorg-13.0.0-0-gd7b669b3a303) Target: armv7-unknown-freebsd13.1-gnueabihf Thread model: posix InstalledDir: /usr/bin
_ALTCCVERSION_921dbbb2=none
_CXXINTERNAL_acaad9ca=FreeBSD clang version 13.0.0 (git@github.com:llvm/llvm-project.git llvmorg-13.0.0-0-gd7b669b3a303) Target: armv7-unknown-freebsd13.1-gnueabihf Thread model: posix InstalledDir: /usr/bin "/usr/bin/ld" "--eh-frame-hdr" "-dynamic-linker" "/libexec/ld-elf.so.1" "--hash-style=both" "--enable-new-dtags" "-o" "a.out" "/usr/lib/crt1.o" "/usr/lib/crti.o" "/usr/lib/crtbegin.o" "-L/usr/lib" "/dev/null" "-lc++" "-lm" "-lgcc" "--as-needed" "-lgcc_s" "--no-as-needed" "-lc" "-lgcc" "--as-needed" "-lgcc_s" "--no-as-needed" "/usr/lib/crtend.o" "/usr/lib/crtn.o"
CC_OUTPUT_921dbbb2_58173849=yes
CC_OUTPUT_921dbbb2_9bdba57c=yes
CC_OUTPUT_921dbbb2_6a4fe7f5=yes
CC_OUTPUT_921dbbb2_6bcac02b=yes
CC_OUTPUT_921dbbb2_67d20829=yes
CC_OUTPUT_921dbbb2_bfa62e83=yes
CC_OUTPUT_921dbbb2_f0b4d593=yes
CC_OUTPUT_921dbbb2_308abb44=yes
CC_OUTPUT_921dbbb2_f00456e5=yes
CC_OUTPUT_921dbbb2_65ad290d=yes
CC_OUTPUT_921dbbb2_f2776b26=yes
CC_OUTPUT_921dbbb2_53255a77=yes
CC_OUTPUT_921dbbb2_911cfe02=yes
CC_OUTPUT_921dbbb2_b2657cc3=yes
CC_OUTPUT_921dbbb2_380987f7=yes
CC_OUTPUT_921dbbb2_160933ec=yes
CC_OUTPUT_921dbbb2_fb62803b=yes
CC_OUTPUT_921dbbb2_af59ad06=yes
CC_OUTPUT_921dbbb2_a15f3fcf=yes
_OBJC_CCVERSION_921dbbb2=FreeBSD clang version 13.0.0 (git@github.com:llvm/llvm-project.git llvmorg-13.0.0-0-gd7b669b3a303) Target: armv7-unknown-freebsd13.1-gnueabihf Thread model: posix InstalledDir: /usr/bin
_OBJC_ALTCCVERSION_921dbbb2=none
ARCH=armv7
OPSYS=FreeBSD
_OSRELEASE=13.1-RELEASE-p2
OSREL=13.1
OSVERSION=1301000
PYTHONBASE=/usr/local
CONFIGURE_MAX_CMD_LEN=524288
HAVE_PORTS_ENV=1
#### Misc Poudriere ####
GID=0
UID=0
---End make.conf---
--Resource limits--
cpu time (seconds, -t) unlimited
file size (512-blocks, -f) unlimited
data seg size (kbytes, -d) 1048576
stack size (kbytes, -s) 1048576
core file size (512-blocks, -c) unlimited
max memory size (kbytes, -m) unlimited
locked memory (kbytes, -l) unlimited
max user processes (-u) 89999
open files (-n) 1024
virtual mem size (kbytes, -v) unlimited
swap limit (kbytes, -w) unlimited
socket buffer size (bytes, -b) unlimited
pseudo-terminals (-p) unlimited
kqueues (-k) unlimited
umtx shared locks (-o) unlimited
--End resource limits--
=======================<phase: check-sanity >============================
===> License BSD2CLAUSE accepted by the user
===========================================================================
=======================<phase: pkg-depends >============================
===> py39-pyscf-2.1.0 depends on file: /usr/local/sbin/pkg - not found
===> Installing existing package /packages/All/pkg-1.18.4.pkg
[131releng-armv7-default-job-08] Installing pkg-1.18.4...
[131releng-armv7-default-job-08] Extracting pkg-1.18.4: .......... done
===> py39-pyscf-2.1.0 depends on file: /usr/local/sbin/pkg - found
===> Returning to build of py39-pyscf-2.1.0
===========================================================================
=======================<phase: fetch-depends >============================
===========================================================================
=======================<phase: fetch >============================
===> License BSD2CLAUSE accepted by the user
===> Fetching all distfiles required by py39-pyscf-2.1.0 for building
===========================================================================
=======================<phase: checksum >============================
===> License BSD2CLAUSE accepted by the user
===> Fetching all distfiles required by py39-pyscf-2.1.0 for building
=> SHA256 Checksum OK for pyscf-pyscf-v2.1.0_GH0.tar.gz.
===========================================================================
=======================<phase: extract-depends>============================
===========================================================================
=======================<phase: extract >============================
===> License BSD2CLAUSE accepted by the user
===> Fetching all distfiles required by py39-pyscf-2.1.0 for building
===> Extracting for py39-pyscf-2.1.0
=> SHA256 Checksum OK for pyscf-pyscf-v2.1.0_GH0.tar.gz.
===========================================================================
=======================<phase: patch-depends >============================
===========================================================================
=======================<phase: patch >============================
===> Patching for py39-pyscf-2.1.0
===> Applying FreeBSD patches for py39-pyscf-2.1.0 from /usr/ports/science/py-pyscf/files
===========================================================================
=======================<phase: build-depends >============================
===> py39-pyscf-2.1.0 depends on package: py39-numpy>=1.16,1<1.24,1 - not found
===> Installing existing package /packages/All/py39-numpy-1.23.3,1.pkg
[131releng-armv7-default-job-08] Installing py39-numpy-1.23.3,1...
[131releng-armv7-default-job-08] `-- Installing gcc11-11.3.0_1...
[131releng-armv7-default-job-08] | `-- Installing binutils-2.37_4,1...
[131releng-armv7-default-job-08] | | `-- Installing gettext-runtime-0.21...
[131releng-armv7-default-job-08] | | `-- Installing indexinfo-0.3.1...
[131releng-armv7-default-job-08] | | `-- Extracting indexinfo-0.3.1: .... done
[131releng-armv7-default-job-08] | | `-- Extracting gettext-runtime-0.21: .......... done
[131releng-armv7-default-job-08] | `-- Extracting binutils-2.37_4,1: .......... done
[131releng-armv7-default-job-08] | `-- Installing gmp-6.2.1...
[131releng-armv7-default-job-08] | `-- Extracting gmp-6.2.1: .......... done
[131releng-armv7-default-job-08] | `-- Installing mpc-1.2.1...
[131releng-armv7-default-job-08] | | `-- Installing mpfr-4.1.0_1...
[131releng-armv7-default-job-08] | | `-- Extracting mpfr-4.1.0_1: .......... done
<snip>
If you prefer to do this manually, replace the following symlinks with
either an empty file or your site-local certificate bundle.
* /etc/ssl/cert.pem
* /usr/local/etc/ssl/cert.pem
* /usr/local/openssl/cert.pem
===> py39-pyscf-2.1.0 depends on executable: cmake - found
===> Returning to build of py39-pyscf-2.1.0
===> py39-pyscf-2.1.0 depends on executable: gmake - not found
===> Installing existing package /packages/All/gmake-4.3_2.pkg
[131releng-armv7-default-job-08] Installing gmake-4.3_2...
[131releng-armv7-default-job-08] Extracting gmake-4.3_2: .......... done
===> py39-pyscf-2.1.0 depends on executable: gmake - found
===> Returning to build of py39-pyscf-2.1.0
===> py39-pyscf-2.1.0 depends on executable: gfortran11 - found
===> py39-pyscf-2.1.0 depends on package: py39-setuptools>=63.1.0 - found
===> py39-pyscf-2.1.0 depends on file: /usr/local/bin/python3.9 - found
===> py39-pyscf-2.1.0 depends on file: /usr/local/bin/as - found
===========================================================================
=======================<phase: lib-depends >============================
===> py39-pyscf-2.1.0 depends on shared library: libcint.so - not found
===> Installing existing package /packages/All/libcint-5.1.6.pkg
[131releng-armv7-default-job-08] Installing libcint-5.1.6...
[131releng-armv7-default-job-08] Extracting libcint-5.1.6: ........ done
===> py39-pyscf-2.1.0 depends on shared library: libcint.so - found (/usr/local/lib/libcint.so)
===> Returning to build of py39-pyscf-2.1.0
===> py39-pyscf-2.1.0 depends on shared library: libxc.so - not found
===> Installing existing package /packages/All/libxc-5.2.3_1.pkg
[131releng-armv7-default-job-08] Installing libxc-5.2.3_1...
[131releng-armv7-default-job-08] Extracting libxc-5.2.3_1: .......... done
===> py39-pyscf-2.1.0 depends on shared library: libxc.so - found (/usr/local/lib/libxc.so)
===> Returning to build of py39-pyscf-2.1.0
===> py39-pyscf-2.1.0 depends on shared library: libxcfun.so - not found
===> Installing existing package /packages/All/xcfun-2.1.1.1.pkg
[131releng-armv7-default-job-08] Installing xcfun-2.1.1.1...
[131releng-armv7-default-job-08] Extracting xcfun-2.1.1.1: .......... done
===> py39-pyscf-2.1.0 depends on shared library: libxcfun.so - found (/usr/local/lib/libxcfun.so)
===> Returning to build of py39-pyscf-2.1.0
===> py39-pyscf-2.1.0 depends on shared library: libopenblas.so - found (/usr/local/lib/libopenblas.so)
===========================================================================
=======================<phase: configure >============================
===> Configuring for py39-pyscf-2.1.0
running config
===========================================================================
=======================<phase: build >============================
===> Building for py39-pyscf-2.1.0
running build
running build_ext
Configuring extensions
cmake -S/wrkdirs/usr/ports/science/py-pyscf/work-py39/pyscf-2.1.0/pyscf/lib -Bbuild/temp.freebsd-13.1-RELEASE-p2-arm-cpython-39
-- The C compiler identification is Clang 13.0.0
-- The CXX compiler identification is Clang 13.0.0
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /usr/bin/cc - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /usr/bin/c++ - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Looking for sgemm_
-- Looking for sgemm_ - not found
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Failed
-- Looking for pthread_create in pthreads
-- Looking for pthread_create in pthreads - not found
-- Looking for pthread_create in pthread
-- Looking for pthread_create in pthread - found
-- Found Threads: TRUE
-- Looking for sgemm_
-- Looking for sgemm_ - found
-- Found BLAS: /usr/local/lib/libopenblas.so
-- Looking for ffsll
-- Looking for ffsll - found
-- BLAS libraries: /usr/local/lib/libopenblas.so
-- Could NOT find OpenMP_C (missing: OpenMP_C_FLAGS OpenMP_C_LIB_NAMES)
-- Could NOT find OpenMP_CXX (missing: OpenMP_CXX_FLAGS OpenMP_CXX_LIB_NAMES)
-- Could NOT find OpenMP (missing: OpenMP_C_FOUND OpenMP_CXX_FOUND)
-- Configuring done
-- Generating done
-- Build files have been written to: /wrkdirs/usr/ports/science/py-pyscf/work-py39/pyscf-2.1.0/build/temp.freebsd-13.1-RELEASE-p2-arm-cpython-39
Building binaries
cmake --build build/temp.freebsd-13.1-RELEASE-p2-arm-cpython-39 -j2
gmake[1]: Entering directory '/wrkdirs/usr/ports/science/py-pyscf/work-py39/pyscf-2.1.0/build/temp.freebsd-13.1-RELEASE-p2-arm-cpython-39'
gmake[2]: Entering directory '/wrkdirs/usr/ports/science/py-pyscf/work-py39/pyscf-2.1.0/build/temp.freebsd-13.1-RELEASE-p2-arm-cpython-39'
gmake[3]: Entering directory '/wrkdirs/usr/ports/science/py-pyscf/work-py39/pyscf-2.1.0/build/temp.freebsd-13.1-RELEASE-p2-arm-cpython-39'
gmake[3]: Entering directory '/wrkdirs/usr/ports/science/py-pyscf/work-py39/pyscf-2.1.0/build/temp.freebsd-13.1-RELEASE-p2-arm-cpython-39'
gmake[3]: Leaving directory '/wrkdirs/usr/ports/science/py-pyscf/work-py39/pyscf-2.1.0/build/temp.freebsd-13.1-RELEASE-p2-arm-cpython-39'
gmake[3]: Leaving directory '/wrkdirs/usr/ports/science/py-pyscf/work-py39/pyscf-2.1.0/build/temp.freebsd-13.1-RELEASE-p2-arm-cpython-39'
gmake[3]: Entering directory '/wrkdirs/usr/ports/science/py-pyscf/work-py39/pyscf-2.1.0/build/temp.freebsd-13.1-RELEASE-p2-arm-cpython-39'
gmake[3]: Entering directory '/wrkdirs/usr/ports/science/py-pyscf/work-py39/pyscf-2.1.0/build/temp.freebsd-13.1-RELEASE-p2-arm-cpython-39'
[ 2%] Building C object dft/CMakeFiles/xc_itrf.dir/libxc_itrf.c.o
[ 2%] Building C object np_helper/CMakeFiles/np_helper.dir/transpose.c.o
[ 3%] Building C object np_helper/CMakeFiles/np_helper.dir/pack_tril.c.o
[ 4%] Linking C shared library /wrkdirs/usr/ports/science/py-pyscf/work-py39/pyscf-2.1.0/pyscf/lib/libxc_itrf.so
gmake[3]: Leaving directory '/wrkdirs/usr/ports/science/py-pyscf/work-py39/pyscf-2.1.0/build/temp.freebsd-13.1-RELEASE-p2-arm-cpython-39'
[ 4%] Built target xc_itrf
[ 6%] Building C object np_helper/CMakeFiles/np_helper.dir/npdot.c.o
[ 7%] Building C object np_helper/CMakeFiles/np_helper.dir/condense.c.o
gmake[3]: Entering directory '/wrkdirs/usr/ports/science/py-pyscf/work-py39/pyscf-2.1.0/build/temp.freebsd-13.1-RELEASE-p2-arm-cpython-39'
gmake[3]: Leaving directory '/wrkdirs/usr/ports/science/py-pyscf/work-py39/pyscf-2.1.0/build/temp.freebsd-13.1-RELEASE-p2-arm-cpython-39'
gmake[3]: Entering directory '/wrkdirs/usr/ports/science/py-pyscf/work-py39/pyscf-2.1.0/build/temp.freebsd-13.1-RELEASE-p2-arm-cpython-39'
[ 8%] Building C object dft/CMakeFiles/xcfun_itrf.dir/xcfun_itrf.c.o
[ 9%] Building C object np_helper/CMakeFiles/np_helper.dir/omp_reduce.c.o
[ 10%] Building C object np_helper/CMakeFiles/np_helper.dir/np_helper.c.o
[ 12%] Linking C shared library /wrkdirs/usr/ports/science/py-pyscf/work-py39/pyscf-2.1.0/pyscf/lib/libxcfun_itrf.so
[ 13%] Linking C shared library /wrkdirs/usr/ports/science/py-pyscf/work-py39/pyscf-2.1.0/pyscf/lib/libnp_helper.so
gmake[3]: Leaving directory '/wrkdirs/usr/ports/science/py-pyscf/work-py39/pyscf-2.1.0/build/temp.freebsd-13.1-RELEASE-p2-arm-cpython-39'
[ 13%] Built target xcfun_itrf
gmake[3]: Leaving directory '/wrkdirs/usr/ports/science/py-pyscf/work-py39/pyscf-2.1.0/build/temp.freebsd-13.1-RELEASE-p2-arm-cpython-39'
[ 13%] Built target np_helper
gmake[3]: Entering directory '/wrkdirs/usr/ports/science/py-pyscf/work-py39/pyscf-2.1.0/build/temp.freebsd-13.1-RELEASE-p2-arm-cpython-39'
gmake[3]: Entering directory '/wrkdirs/usr/ports/science/py-pyscf/work-py39/pyscf-2.1.0/build/temp.freebsd-13.1-RELEASE-p2-arm-cpython-39'
gmake[3]: Leaving directory '/wrkdirs/usr/ports/science/py-pyscf/work-py39/pyscf-2.1.0/build/temp.freebsd-13.1-RELEASE-p2-arm-cpython-39'
gmake[3]: Leaving directory '/wrkdirs/usr/ports/science/py-pyscf/work-py39/pyscf-2.1.0/build/temp.freebsd-13.1-RELEASE-p2-arm-cpython-39'
gmake[3]: Entering directory '/wrkdirs/usr/ports/science/py-pyscf/work-py39/pyscf-2.1.0/build/temp.freebsd-13.1-RELEASE-p2-arm-cpython-39'
gmake[3]: Entering directory '/wrkdirs/usr/ports/science/py-pyscf/work-py39/pyscf-2.1.0/build/temp.freebsd-13.1-RELEASE-p2-arm-cpython-39'
[ 15%] Building C object gto/CMakeFiles/cgto.dir/fill_int2c.c.o
[ 15%] Building C object mcscf/CMakeFiles/fci.dir/fci_contract.c.o
[ 16%] Building C object gto/CMakeFiles/cgto.dir/fill_nr_3c.c.o
[ 18%] Building C object gto/CMakeFiles/cgto.dir/fill_r_3c.c.o
[ 19%] Building C object gto/CMakeFiles/cgto.dir/fill_int2e.c.o
[ 20%] Building C object mcscf/CMakeFiles/fci.dir/fci_contract_nosym.c.o
[ 21%] Building C object mcscf/CMakeFiles/fci.dir/fci_rdm.c.o
[ 22%] Building C object gto/CMakeFiles/cgto.dir/fill_r_4c.c.o
[ 24%] Building C object gto/CMakeFiles/cgto.dir/ft_ao.c.o
/wrkdirs/usr/ports/science/py-pyscf/work-py39/pyscf-2.1.0/pyscf/lib/gto/ft_ao.c:228:13: warning: unknown pragma ignored [-Wunknown-pragmas]
#pragma GCC ivdep
^
/wrkdirs/usr/ports/science/py-pyscf/work-py39/pyscf-2.1.0/pyscf/lib/gto/ft_ao.c:245:13: warning: unknown pragma ignored [-Wunknown-pragmas]
#pragma GCC ivdep
^
/wrkdirs/usr/ports/science/py-pyscf/work-py39/pyscf-2.1.0/pyscf/lib/gto/ft_ao.c:262:13: warning: unknown pragma ignored [-Wunknown-pragmas]
#pragma GCC ivdep
^
/wrkdirs/usr/ports/science/py-pyscf/work-py39/pyscf-2.1.0/pyscf/lib/gto/ft_ao.c:288:13: warning: unknown pragma ignored [-Wunknown-pragmas]
#pragma GCC ivdep
^
/wrkdirs/usr/ports/science/py-pyscf/work-py39/pyscf-2.1.0/pyscf/lib/gto/ft_ao.c:298:13: warning: unknown pragma ignored [-Wunknown-pragmas]
#pragma GCC ivdep
^
/wrkdirs/usr/ports/science/py-pyscf/work-py39/pyscf-2.1.0/pyscf/lib/gto/ft_ao.c:494:13: warning: unknown pragma ignored [-Wunknown-pragmas]
#pragma GCC ivdep
^
/wrkdirs/usr/ports/science/py-pyscf/work-py39/pyscf-2.1.0/pyscf/lib/gto/ft_ao.c:635:9: error: unknown type name 'int8_t'; did you mean '__int8_t'?
int8_t *empty = (int8_t *)(csz + nz);
^~~~~~
__int8_t
/usr/include/machine/_types.h:51:22: note: '__int8_t' declared here
typedef signed char __int8_t;
^
/wrkdirs/usr/ports/science/py-pyscf/work-py39/pyscf-2.1.0/pyscf/lib/gto/ft_ao.c:635:34: error: expected expression
int8_t *empty = (int8_t *)(csz + nz);
^
/wrkdirs/usr/ports/science/py-pyscf/work-py39/pyscf-2.1.0/pyscf/lib/gto/ft_ao.c:635:26: error: use of undeclared identifier 'int8_t'
int8_t *empty = (int8_t *)(csz + nz);
^
/wrkdirs/usr/ports/science/py-pyscf/work-py39/pyscf-2.1.0/pyscf/lib/gto/ft_ao.c:636:9: error: unknown type name 'int8_t'; did you mean '__int8_t'?
int8_t *xempty = empty;
^~~~~~
__int8_t
/usr/include/machine/_types.h:51:22: note: '__int8_t' declared here
typedef signed char __int8_t;
^
/wrkdirs/usr/ports/science/py-pyscf/work-py39/pyscf-2.1.0/pyscf/lib/gto/ft_ao.c:637:9: error: unknown type name 'int8_t'; did you mean '__int8_t'?
int8_t *yempty = xempty + nx;
^~~~~~
__int8_t
/usr/include/machine/_types.h:51:22: note: '__int8_t' declared here
typedef signed char __int8_t;
^
/wrkdirs/usr/ports/science/py-pyscf/work-py39/pyscf-2.1.0/pyscf/lib/gto/ft_ao.c:638:9: error: unknown type name 'int8_t'; did you mean '__int8_t'?
int8_t *zempty = yempty + ny;
^~~~~~
__int8_t
/usr/include/machine/_types.h:51:22: note: '__int8_t' declared here
typedef signed char __int8_t;
^
6 warnings and 6 errors generated.
gmake[3]: *** [gto/CMakeFiles/cgto.dir/build.make:146: gto/CMakeFiles/cgto.dir/ft_ao.c.o] Error 1
gmake[3]: Leaving directory '/wrkdirs/usr/ports/science/py-pyscf/work-py39/pyscf-2.1.0/build/temp.freebsd-13.1-RELEASE-p2-arm-cpython-39'
gmake[2]: *** [CMakeFiles/Makefile2:292: gto/CMakeFiles/cgto.dir/all] Error 2
gmake[2]: *** Waiting for unfinished jobs....
[ 25%] Building C object mcscf/CMakeFiles/fci.dir/fci_string.c.o
[ 26%] Building C object mcscf/CMakeFiles/fci.dir/fci_4pdm.c.o
[ 27%] Building C object mcscf/CMakeFiles/fci.dir/select_ci.c.o
[ 28%] Linking C shared library /wrkdirs/usr/ports/science/py-pyscf/work-py39/pyscf-2.1.0/pyscf/lib/libfci.so
gmake[3]: Leaving directory '/wrkdirs/usr/ports/science/py-pyscf/work-py39/pyscf-2.1.0/build/temp.freebsd-13.1-RELEASE-p2-arm-cpython-39'
[ 28%] Built target fci
gmake[2]: Leaving directory '/wrkdirs/usr/ports/science/py-pyscf/work-py39/pyscf-2.1.0/build/temp.freebsd-13.1-RELEASE-p2-arm-cpython-39'
gmake[1]: *** [Makefile:91: all] Error 2
gmake[1]: Leaving directory '/wrkdirs/usr/ports/science/py-pyscf/work-py39/pyscf-2.1.0/build/temp.freebsd-13.1-RELEASE-p2-arm-cpython-39'
error: command '/usr/local/bin/cmake' failed with exit code 2
*** Error code 1
Stop.
make: stopped in /usr/ports/science/py-pyscf