From nobody Wed Oct 05 05:28:29 2022 X-Original-To: pkg-fallout@mlmmj.nyi.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2610:1c1:1:606c::19:1]) by mlmmj.nyi.freebsd.org (Postfix) with ESMTP id 4Mj35B3fD4z4VBKj for ; Wed, 5 Oct 2022 05:28:30 +0000 (UTC) (envelope-from pkg-fallout@FreeBSD.org) Received: from mxrelay.nyi.freebsd.org (mxrelay.nyi.freebsd.org [IPv6:2610:1c1:1:606c::19:3]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (4096 bits) server-digest SHA256 client-signature RSA-PSS (4096 bits) client-digest SHA256) (Client CN "mxrelay.nyi.freebsd.org", Issuer "R3" (verified OK)) by mx1.freebsd.org (Postfix) with ESMTPS id 4Mj35B0YTYz3rbK for ; Wed, 5 Oct 2022 05:28:30 +0000 (UTC) (envelope-from pkg-fallout@FreeBSD.org) Received: from ampere3.nyi.freebsd.org (ampere3.nyi.freebsd.org [IPv6:2610:1c1:1:6080::16:26]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (4096 bits) server-digest SHA256) (Client did not present a certificate) by mxrelay.nyi.freebsd.org (Postfix) with ESMTPS id 4Mj3596hSTzp6Q for ; Wed, 5 Oct 2022 05:28:29 +0000 (UTC) (envelope-from pkg-fallout@FreeBSD.org) Received: from ampere3.nyi.freebsd.org (localhost [127.0.0.1]) by ampere3.nyi.freebsd.org (8.16.1/8.16.1) with ESMTP id 2955STTf062104 for ; Wed, 5 Oct 2022 05:28:29 GMT (envelope-from pkg-fallout@FreeBSD.org) Received: (from root@localhost) by ampere3.nyi.freebsd.org (8.16.1/8.16.1/Submit) id 2955STYD062103; Wed, 5 Oct 2022 05:28:29 GMT (envelope-from pkg-fallout@FreeBSD.org) Date: Wed, 5 Oct 2022 05:28:29 GMT From: pkg-fallout@FreeBSD.org Message-Id: <202210050528.2955STYD062103@ampere3.nyi.freebsd.org> To: pkg-fallout@FreeBSD.org Subject: [package - 131releng-armv7-default][science/py-PyNE] Failed for py39-PyNE-0.7.7_3 in configure ARC-Message-Signature: i=1; a=rsa-sha256; c=relaxed/relaxed; d=freebsd.org; s=dkim; t=1664947710; h=from:from:reply-to:subject:subject:date:date:message-id:message-id: to:to:cc; bh=wws1t7WvJVBbuiqLdmdAFo+VAHNgAhnOEQMwSTCh+LA=; b=T7AJHgx14166wnGhLLmqlva7AfGcCe5c72Mi1THgC46KWlaj/2Bagl9EC8SWqgOBvdETCE jZmWKkAwnU9ufWyCbRMRz0eDhdqoLWEW/VSz5KJWfeNg1kWtpbOr7GG36LChfHtWK5CWXc sqLAsdnK4DrRw261CpnBhbUgO5OuFQye620oDDRHVYWtamTZ248F5VF/lOQMhnz5kMcgx9 lhsw5Ju7zD7A+ROeqo9/1glQZeDK8EHcIzqG5ArdB4zb6FjzCtj558rLGz3y6G2n9DOUZT iBMJPjCeHi3VT1IlnjMXqg4ljhCW2PdIdcFltPqvqu2OvkjaWN5V4Vc1ZfBjHQ== ARC-Seal: i=1; s=dkim; d=freebsd.org; t=1664947710; a=rsa-sha256; cv=none; b=cutcw9DZesm2j+Kk6ppDzGmMe6hRqBoEYN0tbhEcZ0sPjCxpQkRmZvoGR0h7wjBMBo+F8O caFN22NC1CZgQ0MC/CoOjuVRPPKOG4Exo4QNTqQP43Pnxi42BLvUwYOkAibblNvecB6rQ9 wQcAAJ5t1GO5JKp2X0onxZNqx1pb9NKpKtEOjPYSYDiwJGooyPmnpuMqFQHL9lq7z+leJE 3LnW/RfvQVO5/MvGggDmm/7xCHYvdL6DNy8Y/BNMNzBtJjG2PHtFc+BeKUIEIeq0KlSeyB Wkn7bvhIszV+Sc9+m05zqP2MFQXX3tZFwf2eFNAmG2BYI9vcbsbiB7UlAhXrnQ== ARC-Authentication-Results: i=1; mx1.freebsd.org; none X-ThisMailContainsUnwantedMimeParts: N List-Id: Fallout logs from package building List-Archive: https://lists.freebsd.org/archives/freebsd-pkg-fallout List-Help: List-Post: List-Subscribe: List-Unsubscribe: Sender: owner-freebsd-pkg-fallout@freebsd.org You are receiving this mail as a port that you maintain is failing to build on the FreeBSD package build server. Please investigate the failure and submit a PR to fix build. Maintainer: yuri@FreeBSD.org Log URL: http://ampere3.nyi.freebsd.org/data/131releng-armv7-default/b46629e97f41/logs/py39-PyNE-0.7.7_3.log Build URL: http://ampere3.nyi.freebsd.org/build.html?mastername=131releng-armv7-default&build=b46629e97f41 Log: =>> Building science/py-PyNE build started at Wed Oct 5 05:18:35 UTC 2022 port directory: /usr/ports/science/py-PyNE package name: py39-PyNE-0.7.7_3 building for: FreeBSD 131releng-armv7-default-job-09 13.1-RELEASE-p2 FreeBSD 13.1-RELEASE-p2 1301000 arm maintained by: yuri@FreeBSD.org Makefile ident: Poudriere version: 3.2.8-21-g883afb07 Host OSVERSION: 1400063 Jail OSVERSION: 1301000 Job Id: 09 ---Begin Environment--- SHELL=/bin/csh OSVERSION=1301000 UNAME_v=FreeBSD 13.1-RELEASE-p2 1301000 UNAME_r=13.1-RELEASE-p2 BLOCKSIZE=K MAIL=/var/mail/root MM_CHARSET=UTF-8 LANG=C.UTF-8 STATUS=1 HOME=/root PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin LOCALBASE=/usr/local USER=root LIBEXECPREFIX=/usr/local/libexec/poudriere POUDRIERE_VERSION=3.2.8-21-g883afb07 MASTERMNT=/usr/local/poudriere/data/.m/131releng-armv7-default/ref POUDRIERE_BUILD_TYPE=bulk PACKAGE_BUILDING=yes SAVED_TERM= PWD=/usr/local/poudriere/data/.m/131releng-armv7-default/ref/.p/pool P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS MASTERNAME=131releng-armv7-default SCRIPTPREFIX=/usr/local/share/poudriere OLDPWD=/usr/local/poudriere/data/.m/131releng-armv7-default/ref/.p SCRIPTPATH=/usr/local/share/poudriere/bulk.sh POUDRIEREPATH=/usr/local/bin/poudriere ---End Environment--- ---Begin Poudriere Port Flags/Env--- PORT_FLAGS= PKGENV= FLAVOR=py39 DEPENDS_ARGS= MAKE_ARGS= FLAVOR=py39 ---End Poudriere Port Flags/Env--- ---Begin OPTIONS List--- ---End OPTIONS List--- --MAINTAINER-- yuri@FreeBSD.org --End MAINTAINER-- --CONFIGURE_ARGS-- --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- F77="gfortran11" FC="gfortran11" FFLAGS="-O -fallow-argument-mismatch -Wl,-rpath=/usr/local/lib/gcc11" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc11" PYTHON="/usr/local/bin/python3.9" XDG_DATA_HOME=/wrkdirs/usr/ports/science/py-PyNE/work-py39 XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/py-PyNE/work-py39 XDG_CACHE_HOME=/wrkdirs/usr/ports/science/py-PyNE/work-py39/.cache HOME=/wrkdirs/usr/ports/science/py-PyNE/work-py39 TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/py-PyNE/work-py39/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/science/py-PyNE/work-py39/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig SHELL=/bin/sh CONFIG_SHELL=/bin/sh --End CONFIGURE_ENV-- --MAKE_ENV-- DESTDIR=/wrkdirs/usr/ports/science/py-PyNE/work-py39/stage F77="gfortran11" FC="gfortran11" FFLAGS="-O -fallow-argument-mismatch -Wl,-rpath=/usr/local/lib/gcc11" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc11" XDG_DATA_HOME=/wrkdirs/usr/ports/science/py-PyNE/work-py39 XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/py-PyNE/work-py39 XDG_CACHE_HOME=/wrkdirs/usr/ports/science/py-PyNE/work-py39/.cache HOME=/wrkdirs/usr/ports/science/py-PyNE/work-py39 TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/py-PyNE/work-py39/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/science/py-PyNE/work-py39/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES ADDR2LINE="/usr/local/bin/addr2line" AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bi n/nm" OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" LDSHARED="cc -shared" PYTHONDONTWRITEBYTECODE= PYTHONOPTIMIZE= PREFIX=/usr/local LOCALBASE=/usr/local CC="cc" CFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " CPP="cpp" CPPFLAGS="" LDFLAGS=" -Wl,-rpath=/usr/local/lib/gcc11 -L/usr/local/lib/gcc11 -B/usr/local/bin -fstack-protector-strong " LIBS="" CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" --End MAKE_ENV-- --PLIST_SUB-- PYTHON_INCLUDEDIR=include/python3.9 PYTHON_LIBDIR=lib/python3.9 PYTHON_PLATFORM=freebsd13 PYTHON_SITELIBDIR=lib/python3.9/site-packages PYTHON_SUFFIX=39 PYTHON_EXT_SUFFIX=.cpython-39 PYTHON_VER=3.9 PYTHON_VERSION=python3.9 PYTHON2="@comment " PYTHON3="" OSREL=13.1 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/PyNE" EXAMPLESDIR="share/examples/PyNE" DATADIR="share/PyNE" WWWDIR="www/PyNE" ETCDIR="etc/PyNE" --End PLIST_SUB-- --SUB_LIST-- PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/PyNE DOCSDIR=/usr/local/share/doc/PyNE EXAMPLESDIR=/usr/local/share/examples/PyNE WWWDIR=/usr/local/www/PyNE ETCDIR=/usr/local/etc/PyNE --End SUB_LIST-- ---Begin make.conf--- USE_PACKAGE_DEPENDS=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles PACKAGE_BUILDING=yes PACKAGE_BUILDING_FLAVORS=yes #### /usr/local/etc/poudriere.d/make.conf #### # XXX: We really need this but cannot use it while 'make checksum' does not # try the next mirror on checksum failure. It currently retries the same # failed mirror and then fails rather then trying another. It *does* # try the next if the size is mismatched though. #MASTER_SITE_FREEBSD=yes # Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs MAKE_JOBS_NUMBER=2 #### /usr/ports/Mk/Scripts/ports_env.sh #### _CCVERSION_921dbbb2=FreeBSD clang version 13.0.0 (git@github.com:llvm/llvm-project.git llvmorg-13.0.0-0-gd7b669b3a303) Target: armv7-unknown-freebsd13.1-gnueabihf Thread model: posix InstalledDir: /usr/bin _ALTCCVERSION_921dbbb2=none _CXXINTERNAL_acaad9ca=FreeBSD clang version 13.0.0 (git@github.com:llvm/llvm-project.git llvmorg-13.0.0-0-gd7b669b3a303) Target: armv7-unknown-freebsd13.1-gnueabihf Thread model: posix InstalledDir: /usr/bin "/usr/bin/ld" "--eh-frame-hdr" "-dynamic-linker" "/libexec/ld-elf.so.1" "--hash-style=both" "--enable-new-dtags" "-o" "a.out" "/usr/lib/crt1.o" "/usr/lib/crti.o" "/usr/lib/crtbegin.o" "-L/usr/lib" "/dev/null" "-lc++" "-lm" "-lgcc" "--as-needed" "-lgcc_s" "--no-as-needed" "-lc" "-lgcc" "--as-needed" "-lgcc_s" "--no-as-needed" "/usr/lib/crtend.o" "/usr/lib/crtn.o" CC_OUTPUT_921dbbb2_58173849=yes CC_OUTPUT_921dbbb2_9bdba57c=yes CC_OUTPUT_921dbbb2_6a4fe7f5=yes CC_OUTPUT_921dbbb2_6bcac02b=yes CC_OUTPUT_921dbbb2_67d20829=yes CC_OUTPUT_921dbbb2_bfa62e83=yes CC_OUTPUT_921dbbb2_f0b4d593=yes CC_OUTPUT_921dbbb2_308abb44=yes CC_OUTPUT_921dbbb2_f00456e5=yes CC_OUTPUT_921dbbb2_65ad290d=yes CC_OUTPUT_921dbbb2_f2776b26=yes CC_OUTPUT_921dbbb2_53255a77=yes CC_OUTPUT_921dbbb2_911cfe02=yes CC_OUTPUT_921dbbb2_b2657cc3=yes CC_OUTPUT_921dbbb2_380987f7=yes CC_OUTPUT_921dbbb2_160933ec=yes CC_OUTPUT_921dbbb2_fb62803b=yes CC_OUTPUT_921dbbb2_af59ad06=yes CC_OUTPUT_921dbbb2_a15f3fcf=yes _OBJC_CCVERSION_921dbbb2=FreeBSD clang version 13.0.0 (git@github.com:llvm/llvm-project.git llvmorg-13.0.0-0-gd7b669b3a303) Target: armv7-unknown-freebsd13.1-gnueabihf Thread model: posix InstalledDir: /usr/bin _OBJC_ALTCCVERSION_921dbbb2=none ARCH=armv7 OPSYS=FreeBSD _OSRELEASE=13.1-RELEASE-p2 OSREL=13.1 OSVERSION=1301000 PYTHONBASE=/usr/local CONFIGURE_MAX_CMD_LEN=524288 HAVE_PORTS_ENV=1 #### Misc Poudriere #### GID=0 UID=0 ---End make.conf--- --Resource limits-- cpu time (seconds, -t) unlimited file size (512-blocks, -f) unlimited data seg size (kbytes, -d) 1048576 stack size (kbytes, -s) 1048576 core file size (512-blocks, -c) unlimited max memory size (kbytes, -m) unlimited locked memory (kbytes, -l) unlimited max user processes (-u) 89999 open files (-n) 1024 virtual mem size (kbytes, -v) unlimited swap limit (kbytes, -w) unlimited socket buffer size (bytes, -b) unlimited pseudo-terminals (-p) unlimited kqueues (-k) unlimited umtx shared locks (-o) unlimited --End resource limits-- =================================================== ===> License BSD2CLAUSE accepted by the user =========================================================================== =================================================== ===> py39-PyNE-0.7.7_3 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-1.18.4.pkg [131releng-armv7-default-job-09] Installing pkg-1.18.4... [131releng-armv7-default-job-09] Extracting pkg-1.18.4: .......... done ===> py39-PyNE-0.7.7_3 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of py39-PyNE-0.7.7_3 =========================================================================== =================================================== =========================================================================== =================================================== ===> License BSD2CLAUSE accepted by the user ===> Fetching all distfiles required by py39-PyNE-0.7.7_3 for building =========================================================================== =================================================== ===> License BSD2CLAUSE accepted by the user ===> Fetching all distfiles required by py39-PyNE-0.7.7_3 for building => SHA256 Checksum OK for PyNE-0.7.7/decay.tar.gz. => SHA256 Checksum OK for PyNE-0.7.7/cram.tar.gz. => SHA256 Checksum OK for PyNE-0.7.7/decay-linux-clang.tar.gz. => SHA256 Checksum OK for PyNE-0.7.7/cram-linux-clang.tar.gz. => SHA256 Checksum OK for PyNE-0.7.7/prebuilt_nuc_data.h5. => SHA256 Checksum OK for PyNE-0.7.7/pyne-pyne-0.7.7_GH0.tar.gz. =========================================================================== =================================================== =========================================================================== =================================================== ===> License BSD2CLAUSE accepted by the user ===> Fetching all distfiles required by py39-PyNE-0.7.7_3 for building ===> Extracting for py39-PyNE-0.7.7_3 => SHA256 Checksum OK for PyNE-0.7.7/decay.tar.gz. => SHA256 Checksum OK for PyNE-0.7.7/cram.tar.gz. => SHA256 Checksum OK for PyNE-0.7.7/decay-linux-clang.tar.gz. => SHA256 Checksum OK for PyNE-0.7.7/cram-linux-clang.tar.gz. => SHA256 Checksum OK for PyNE-0.7.7/prebuilt_nuc_data.h5. => SHA256 Checksum OK for PyNE-0.7.7/pyne-pyne-0.7.7_GH0.tar.gz. =========================================================================== =================================================== =========================================================================== =================================================== ===> Patching for py39-PyNE-0.7.7_3 ===> Applying FreeBSD patches for py39-PyNE-0.7.7_3 from /usr/ports/science/py-PyNE/files =========================================================================== =================================================== ===> py39-PyNE-0.7.7_3 depends on executable: cmake - not found ===> Installing existing package /packages/All/cmake-core-3.24.0.pkg [131releng-armv7-default-job-09] Installing cmake-core-3.24.0... [131releng-armv7-default-job-09] `-- Installing curl-7.85.0... [131releng-armv7-default-job-09] | `-- Installing ca_root_nss-3.83... -- ===> NOTICE: The openmpi port currently does not have a maintainer. As a result, it is more likely to have unresolved issues, not be up-to-date, or even be removed in the future. To volunteer to maintain this port, please create an issue at: https://bugs.freebsd.org/bugzilla More information about port maintainership is available at: https://docs.freebsd.org/en/articles/contributing/#ports-contributing ===> py39-PyNE-0.7.7_3 depends on shared library: libMOAB.so - found (/usr/local/lib/libMOAB.so) ===> Returning to build of py39-PyNE-0.7.7_3 ===> py39-PyNE-0.7.7_3 depends on shared library: libsz.so - found (/usr/local/lib/libsz.so) =========================================================================== =================================================== ===> Configuring for py39-PyNE-0.7.7_3 setup.py:38: DeprecationWarning: the imp module is deprecated in favour of importlib; see the module's documentation for alternative uses import imp /usr/local/bin/cmake -- The C compiler identification is Clang 13.0.0 -- The CXX compiler identification is Clang 13.0.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Performing Test COMPILER_SUPPORTS_CXX11 -- Performing Test COMPILER_SUPPORTS_CXX11 - Success / \ ) (( )) ( (@) /|\ ))_(( /|\ |-| / | \ (/\|/\) / | \ (@) | | -------------------/--|-voV---\`|'/--Vov-|--\---------------------|-| |-| '^` (o o) '^` | | | | `\Y/' |-| |-| | | | | /\ ___ __ __ /\ |-| |-| /^~\ / _ \_ _ /\ \ \/__\ /^~\ | | | | /^~\ / /_)/ | | |/ \/ /_\ /^~\ |-| |-| /^~\ / ___/| |_| / /\ //__ /^~\ | | | | ^||` \/ \__, \_\ \/\__/ ^||` |-| |-| || |____/ || | | | | ==== ==== |-| |-| | | | | |-| |-|___________________________________________________________________| | (@) l /\ / ( ( \ /\ l `\|-| l / V \ \ V \ l (@) l/ _) )_ \I `\ /' ` -- Pyne platform defined as: __LINUX__ -- Checking whether to build spatial solvers -- -- Checking CMAKE_CXX_COMPILER_ID: Clang -- Build spatial solvers: false -- Build type: Release -- PyNE Fast Compile: FALSE -- CMAKE_INSTALL_RPATH: /usr/local/lib:/usr/lib -- The ASM compiler identification is Clang with GNU-like command-line -- Found assembler: /usr/bin/cc -- CMake Install Prefix: /usr/local -- Dependency Root Dir (DEPS_ROOT_DIR): /usr -- Dependency Hints (DEPS_HINTS): HINTS;/usr -- Dependency Binary Hints (DEPS_BIN_HINTS): HINTS;/usr;/usr/bin -- Dependency Library Hints (DEPS_LIB_HINTS): HINTS;/usr;/usr/lib -- Dependency Include Hints (DEPS_INCLUDE_HINTS): HINTS;/usr/include -- HDF5 Root: /usr/local -- Found HDF5: /usr/local/lib/libhdf5.so;/usr/local/lib/libhdf5_hl.so;hdf5-shared (found version "1.12.2") -- HDF5 Include directory: /usr/local/include -- HDF5 Library directories: /usr/local/lib -- HDF5 Libraries: hdf5-shared -- HDF5 library version: 1.12.2 -- MOAB Root: /usr/local -- Found MOAB: /usr/local/lib/libMOAB.so -- MOAB header files: /usr/local/include -- MOAB library: /usr/local/lib/libMOAB.so -- MOAB Found: TRUE -- Found PythonInterp: /usr/local/bin/python3.9 (found version "3.9.14") -- Found PythonLibs: /usr/local/lib/libpython3.9.so (found version "3.9.14") -- PYTHON_EXECUTABLE: /usr/local/bin/python3.9 -- PYTHON_SITE_PACKAGES: /usr/local/lib/python3.9/site-packages -- NUMPY_VERSION_STRING = 1.23.3 -- Found Numpy: 1.23.3 -- The Fortran compiler identification is GNU 11.3.0 -- Detecting Fortran compiler ABI info -- Detecting Fortran compiler ABI info - done -- Check for working Fortran compiler: /usr/local/bin/gfortran11 - skipped -- CMAKE_Fortran_IMPLICIT_LINK_DIRECTORIES: /usr/local/lib/gcc11;/usr/local/bin;/usr/local/lib/gcc11/gcc/armv7-portbld-freebsd13.1/11.3.0;/usr/local/armv7-portbld-freebsd13.1/lib -- CMAKE_Fortran_IMPLICIT_LINK_LIBRARIES: gfortran;m;ssp_nonshared;gcc;gcc_s;m;gcc;gcc_s;c;gcc;gcc_s -- Found Cython: /usr/local/bin/cython -- LIBS: hdf5-shared;/usr/local/lib/libpython3.9.so -- Extracting decay.tar.gz x decay.h x decay.cpp -- Extracting decay-linux-clang.tar.gz x decay-linux-clang.s -- Extracting cram.tar.gz x cram.c x cram.h -- Extracting cram-linux-clang.tar.gz x cram-linux-clang.s -- Not fast compiling decay.cpp since PyNE fast compile is disabled. -- Not fast compiling cram.c since PyNE fast compile is disabled. -- Include paths for /wrkdirs/usr/ports/science/py-PyNE/work-py39/pyne-0.7.7/src: /usr/local/include;/usr/local/include;/usr/local/lib/python3.9/site-packages/numpy/core/include;/wrkdirs/usr/ports/science/py-PyNE/work-py39/pyne-0.7.7/build/pyne;/wrkdirs/usr/ports/science/py-PyNE/work-py39/pyne-0.7.7/src -- Include paths for /wrkdirs/usr/ports/science/py-PyNE/work-py39/pyne-0.7.7/pyne: /usr/local/include;/usr/local/include;/usr/local/lib/python3.9/site-packages/numpy/core/include;/wrkdirs/usr/ports/science/py-PyNE/work-py39/pyne-0.7.7/build/pyne;/wrkdirs/usr/ports/science/py-PyNE/work-py39/pyne-0.7.7/src -- Modules to Cythonize: ace;bins;data;dtypes;endf;enrichment;extra_types;jsoncpp;material;material_library;nucname;particle;pyne_config;rxname;source;stlcontainers;tally;transmuters;_utils;source_sampling -- F2PY F90 FLAGS: -- Include paths for /wrkdirs/usr/ports/science/py-PyNE/work-py39/pyne-0.7.7/pyne/xs: /usr/local/include;/usr/local/include;/usr/local/lib/python3.9/site-packages/numpy/core/include;/wrkdirs/usr/ports/science/py-PyNE/work-py39/pyne-0.7.7/build/pyne;/wrkdirs/usr/ports/science/py-PyNE/work-py39/pyne-0.7.7/src -- Configuring done -- Generating done -- Build files have been written to: /wrkdirs/usr/ports/science/py-PyNE/work-py39/pyne-0.7.7/build Scanning dependencies of target pyne [ 1%] Building C object src/CMakeFiles/pyne.dir/cram.c.o [ 1%] Built target ReplicatePythonSourceTree [ 2%] Building CXX object src/CMakeFiles/pyne.dir/decay.cpp.o LLVM ERROR: out of memory Allocation failed PLEASE submit a bug report to https://bugs.freebsd.org/submit/ and include the crash backtrace, preprocessed source, and associated run script. Stack dump: 0. Program arguments: /usr/bin/cc -DH5_BUILT_AS_DYNAMIC_LIB -Dpyne_EXPORTS -I/usr/local/lib/python3.9/site-packages/numpy/core/include -I/wrkdirs/usr/ports/science/py-PyNE/work-py39/pyne-0.7.7/build/pyne -I/wrkdirs/usr/ports/science/py-PyNE/work-py39/pyne-0.7.7/src -isystem /usr/local/include -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O3 -DNDEBUG -fPIC -O0 -ffast-math -MD -MT src/CMakeFiles/pyne.dir/cram.c.o -MF CMakeFiles/pyne.dir/cram.c.o.d -o CMakeFiles/pyne.dir/cram.c.o -c /wrkdirs/usr/ports/science/py-PyNE/work-py39/pyne-0.7.7/src/cram.c 1. parser at end of file 2. Code generation 3. Running pass 'Function Pass Manager' on module '/wrkdirs/usr/ports/science/py-PyNE/work-py39/pyne-0.7.7/src/cram.c'. 4. Running pass 'Fast Register Allocator' on function '@pyne_cram_solve_complex' #0 0x03c83de4 (/usr/bin/cc+0x3c83de4) #1 0x03c81d70 (/usr/bin/cc+0x3c81d70) #2 0x03c2220c (/usr/bin/cc+0x3c2220c) #3 0x450ec12c (/lib/libthr.so.3+0x2712c) cc: error: clang frontend command failed with exit code 134 (use -v to see invocation) FreeBSD clang version 13.0.0 (git@github.com:llvm/llvm-project.git llvmorg-13.0.0-0-gd7b669b3a303) Target: armv7-unknown-freebsd13.1-gnueabihf Thread model: posix InstalledDir: /usr/bin cc: note: diagnostic msg: ******************** PLEASE ATTACH THE FOLLOWING FILES TO THE BUG REPORT: Preprocessed source(s) and associated run script(s) are located at: cc: note: diagnostic msg: /tmp/cram-3922f5.c cc: note: diagnostic msg: /tmp/cram-3922f5.sh cc: note: diagnostic msg: ******************** --- src/CMakeFiles/pyne.dir/cram.c.o --- *** [src/CMakeFiles/pyne.dir/cram.c.o] Error code 134 make[3]: stopped in /wrkdirs/usr/ports/science/py-PyNE/work-py39/pyne-0.7.7/build 1 error make[3]: stopped in /wrkdirs/usr/ports/science/py-PyNE/work-py39/pyne-0.7.7/build --- src/CMakeFiles/pyne.dir/all --- *** [src/CMakeFiles/pyne.dir/all] Error code 2 make[2]: stopped in /wrkdirs/usr/ports/science/py-PyNE/work-py39/pyne-0.7.7/build 1 error make[2]: stopped in /wrkdirs/usr/ports/science/py-PyNE/work-py39/pyne-0.7.7/build *** [all] Error code 2 make[1]: stopped in /wrkdirs/usr/ports/science/py-PyNE/work-py39/pyne-0.7.7/build 1 error make[1]: stopped in /wrkdirs/usr/ports/science/py-PyNE/work-py39/pyne-0.7.7/build Traceback (most recent call last): File "", line 1, in File "setup.py", line 481, in main() File "setup.py", line 464, in main main_safe(ns) File "setup.py", line 456, in main_safe main_body(ns) File "setup.py", line 438, in main_body rtn = subprocess.check_call(["make"] + ns.make_args, cwd=ns.build_dir) File "/usr/local/lib/python3.9/subprocess.py", line 373, in check_call raise CalledProcessError(retcode, cmd) subprocess.CalledProcessError: Command '['make', '-j2']' returned non-zero exit status 2. Writing atomic_data.h Writing atomic_data.cpp CMake command is cmake .. -DCMAKE_INSTALL_PREFIX=/usr/local -DHDF5_ROOT=/usr/local -DHDF5_LIBRARIES=/usr/local/lib/libhdf5.so;/usr/local/lib/libhdf5_hl.so -DHDF5_LIBRARY_DIRS=/usr/local/lib -DHDF5_INCLUDE_DIRS=/usr/local/include -DWITH_MOAB=ON -DMOAB_ROOT=/usr/local -DPYNE_FAST_COMPILE=FALSE -DENABLE_SPATIAL_SOLVERS=ON -DPYTHON_EXECUTABLE=/usr/local/bin/python3.9 -------------------- If you are having issues building pyne, please report your problem to pyne-dev@googlegroups.com or look for help at http://pyne.io -------------------- *** Error code 1 Stop. make: stopped in /usr/ports/science/py-PyNE