From nobody Mon Nov 28 20:55:42 2022 X-Original-To: pkg-fallout@mlmmj.nyi.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2610:1c1:1:606c::19:1]) by mlmmj.nyi.freebsd.org (Postfix) with ESMTP id 4NLd664mmgz4httL for ; Mon, 28 Nov 2022 20:55:42 +0000 (UTC) (envelope-from pkg-fallout@FreeBSD.org) Received: from mxrelay.nyi.freebsd.org (mxrelay.nyi.freebsd.org [IPv6:2610:1c1:1:606c::19:3]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (4096 bits) server-digest SHA256 client-signature RSA-PSS (4096 bits) client-digest SHA256) (Client CN "mxrelay.nyi.freebsd.org", Issuer "R3" (verified OK)) by mx1.freebsd.org (Postfix) with ESMTPS id 4NLd662rLVz3Lw6 for ; Mon, 28 Nov 2022 20:55:42 +0000 (UTC) (envelope-from pkg-fallout@FreeBSD.org) ARC-Message-Signature: i=1; a=rsa-sha256; c=relaxed/relaxed; d=freebsd.org; s=dkim; t=1669668942; h=from:from:reply-to:subject:subject:date:date:message-id:message-id: to:to:cc; bh=e7filOCT9x74oUjDosSzBgNukTHiwl5AKyiq1N+jIwE=; b=jEHQgsvkvydhQgu+J2JBa1jWIcalZmUxKTcLR1Ti4a5OBLqmrvYJNO8dsuslyhNgDQgybf OWTR5jhTHYjG6K5PkjJEapOfxKTagwp3RbMB9DZK2xWhTss8SxlAWfAkXdAXuu3LGuHI/B Z9DNcLjvtlojls9Sf0QY2hXZ7Z8Rej3P5b8kWhyw2XQJLe18/v+Vir1izxUyOpMqnnLaFe UTDBelWiE76mTHF22nXTq04Th7DW6/nsa/D06ykf6kgft4kCJiY67Nc9OagXKsJ3nv/oyc yCFuP/3OaOcwggxh0iOKbg6i1rTcjU598BQ8HF57/SY/YWxgHhayzlAQgut/RQ== ARC-Authentication-Results: i=1; mx1.freebsd.org; none ARC-Seal: i=1; s=dkim; d=freebsd.org; t=1669668942; a=rsa-sha256; cv=none; b=lsJF6NQY3qLuRxkrVnxbWa6PEUJB8zBzM8A49EmYlYqk2FgCYtl3fN+BcT5X8/Vbe7yiFG Hvr5MT0ToVaQSeshnGYSSsC2edFuwbEVrzyUh7vJgB/E8wM9UHOG2fWHqN2fUDymhignZ7 XBIi4DmAjNfdycaCkXSXAFPRWOD9HYn5Obqbnlb/pJvapEICh1AY88cbX4R2MHY3YXcKcb ZNBXiOYoVIbY+c0GLRdH3wb3sWvrOjYB67kbWdtY2SrqPFg3uku3451OP2aHiMZICzohng 8pHLAWFzHU91IDXmWmRW0l+cADnoCk2jkZVgrYyOz/Q/Pm0nfpVBteXEIejvgQ== Received: from ampere1.nyi.freebsd.org (ampere1.nyi.freebsd.org [IPv6:2610:1c1:1:6080::16:23]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (4096 bits) server-digest SHA256) (Client did not present a certificate) by mxrelay.nyi.freebsd.org (Postfix) with ESMTPS id 4NLd661sWQzrjx for ; Mon, 28 Nov 2022 20:55:42 +0000 (UTC) (envelope-from pkg-fallout@FreeBSD.org) Received: from ampere1.nyi.freebsd.org (localhost [127.0.0.1]) by ampere1.nyi.freebsd.org (8.16.1/8.16.1) with ESMTP id 2ASKtggX051493 for ; Mon, 28 Nov 2022 20:55:42 GMT (envelope-from pkg-fallout@FreeBSD.org) Received: (from root@localhost) by ampere1.nyi.freebsd.org (8.16.1/8.16.1/Submit) id 2ASKtg1s051492; Mon, 28 Nov 2022 20:55:42 GMT (envelope-from pkg-fallout@FreeBSD.org) Date: Mon, 28 Nov 2022 20:55:42 GMT From: pkg-fallout@FreeBSD.org Message-Id: <202211282055.2ASKtg1s051492@ampere1.nyi.freebsd.org> To: pkg-fallout@FreeBSD.org Subject: [package - 131releng-armv7-quarterly][science/py-pyscf] Failed for py39-pyscf-2.1.0 in build X-ThisMailContainsUnwantedMimeParts: N List-Id: Fallout logs from package building List-Archive: https://lists.freebsd.org/archives/freebsd-pkg-fallout List-Help: List-Post: List-Subscribe: List-Unsubscribe: Sender: owner-freebsd-pkg-fallout@freebsd.org You are receiving this mail as a port that you maintain is failing to build on the FreeBSD package build server. Please investigate the failure and submit a PR to fix build. Maintainer: yuri@FreeBSD.org Log URL: https://pkg-status.freebsd.org/ampere1/data/131releng-armv7-quarterly/835acf7943fd/logs/py39-pyscf-2.1.0.log Build URL: https://pkg-status.freebsd.org/ampere1/build.html?mastername=131releng-armv7-quarterly&build=835acf7943fd Log: =>> Building science/py-pyscf build started at Mon Nov 28 20:55:03 UTC 2022 port directory: /usr/ports/science/py-pyscf package name: py39-pyscf-2.1.0 building for: FreeBSD 131releng-armv7-quarterly-job-01 13.1-RELEASE-p4 FreeBSD 13.1-RELEASE-p4 1301000 arm maintained by: yuri@FreeBSD.org Makefile ident: Poudriere version: 3.2.8-23-ga7f8d188 Host OSVERSION: 1400073 Jail OSVERSION: 1301000 Job Id: 01 ---Begin Environment--- SHELL=/bin/csh OSVERSION=1301000 UNAME_v=FreeBSD 13.1-RELEASE-p4 1301000 UNAME_r=13.1-RELEASE-p4 BLOCKSIZE=K MAIL=/var/mail/root MM_CHARSET=UTF-8 LANG=C.UTF-8 STATUS=1 HOME=/root PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin LOCALBASE=/usr/local USER=root LIBEXECPREFIX=/usr/local/libexec/poudriere POUDRIERE_VERSION=3.2.8-23-ga7f8d188 MASTERMNT=/usr/local/poudriere/data/.m/131releng-armv7-quarterly/ref POUDRIERE_BUILD_TYPE=bulk PACKAGE_BUILDING=yes SAVED_TERM= PWD=/usr/local/poudriere/data/.m/131releng-armv7-quarterly/ref/.p/pool P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS MASTERNAME=131releng-armv7-quarterly SCRIPTPREFIX=/usr/local/share/poudriere OLDPWD=/usr/local/poudriere/data/.m/131releng-armv7-quarterly/ref/.p SCRIPTPATH=/usr/local/share/poudriere/bulk.sh POUDRIEREPATH=/usr/local/bin/poudriere ---End Environment--- ---Begin Poudriere Port Flags/Env--- PORT_FLAGS= PKGENV= FLAVOR=py39 DEPENDS_ARGS= MAKE_ARGS= FLAVOR=py39 ---End Poudriere Port Flags/Env--- ---Begin OPTIONS List--- ---End OPTIONS List--- --MAINTAINER-- yuri@FreeBSD.org --End MAINTAINER-- --CONFIGURE_ARGS-- --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- F77="gfortran11" FC="gfortran11" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc11" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc11" PYTHON="/usr/local/bin/python3.9" XDG_DATA_HOME=/wrkdirs/usr/ports/science/py-pyscf/work-py39 XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/py-pyscf/work-py39 XDG_CACHE_HOME=/wrkdirs/usr/ports/science/py-pyscf/work-py39/.cache HOME=/wrkdirs/usr/ports/science/py-pyscf/work-py39 TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/py-pyscf/work-py39/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/science/py-pyscf/work-py39/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig SHELL=/bin/sh CONFIG_SHELL=/bin/sh --End CONFIGURE_ENV-- --MAKE_ENV-- F77="gfortran11" FC="gfortran11" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc11" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc11" XDG_DATA_HOME=/wrkdirs/usr/ports/science/py-pyscf/work-py39 XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/py-pyscf/work-py39 XDG_CACHE_HOME=/wrkdirs/usr/ports/science/py-pyscf/work-py39/.cache HOME=/wrkdirs/usr/ports/science/py-pyscf/work-py39 TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/py-pyscf/work-py39/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/science/py-pyscf/work-py39/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES ADDR2LINE="/usr/local/bin/addr2line" AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" RANLIB= "/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" LDSHARED="cc -shared" PYTHONDONTWRITEBYTECODE= PYTHONOPTIMIZE= PREFIX=/usr/local LOCALBASE=/usr/local CC="cc" CFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " CPP="cpp" CPPFLAGS="" LDFLAGS=" -Wl,-rpath=/usr/local/lib/gcc11 -L/usr/local/lib/gcc11 -B/usr/local/bin -L/usr/local/lib -fstack-protector-strong " LIBS="" CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" --End MAKE_ENV-- --PLIST_SUB-- PYTHON_INCLUDEDIR=include/python3.9 PYTHON_LIBDIR=lib/python3.9 PYTHON_PLATFORM=freebsd13 PYTHON_SITELIBDIR=lib/python3.9/site-packages PYTHON_SUFFIX=39 PYTHON_EXT_SUFFIX=.cpython-39 PYTHON_VER=3.9 PYTHON_VERSION=python3.9 PYTHON2="@comment " PYTHON3="" OSREL=13.1 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/pyscf" EXAMPLESDIR="share/examples/pyscf" DATADIR="share/pyscf" WWWDIR="www/pyscf" ETCDIR="etc/pyscf" --End PLIST_SUB-- --SUB_LIST-- PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/pyscf DOCSDIR=/usr/local/share/doc/pyscf EXAMPLESDIR=/usr/local/share/examples/pyscf WWWDIR=/usr/local/www/pyscf ETCDIR=/usr/local/etc/pyscf --End SUB_LIST-- ---Begin make.conf--- USE_PACKAGE_DEPENDS=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles PACKAGE_BUILDING=yes PACKAGE_BUILDING_FLAVORS=yes #### /usr/local/etc/poudriere.d/make.conf #### # XXX: We really need this but cannot use it while 'make checksum' does not # try the next mirror on checksum failure. It currently retries the same # failed mirror and then fails rather then trying another. It *does* # try the next if the size is mismatched though. #MASTER_SITE_FREEBSD=yes # Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs MAKE_JOBS_NUMBER=2 #### /usr/ports/Mk/Scripts/ports_env.sh #### _CCVERSION_921dbbb2=FreeBSD clang version 13.0.0 (git@github.com:llvm/llvm-project.git llvmorg-13.0.0-0-gd7b669b3a303) Target: armv7-unknown-freebsd13.1-gnueabihf Thread model: posix InstalledDir: /usr/bin _ALTCCVERSION_921dbbb2=none _CXXINTERNAL_acaad9ca=FreeBSD clang version 13.0.0 (git@github.com:llvm/llvm-project.git llvmorg-13.0.0-0-gd7b669b3a303) Target: armv7-unknown-freebsd13.1-gnueabihf Thread model: posix InstalledDir: /usr/bin "/usr/bin/ld" "--eh-frame-hdr" "-dynamic-linker" "/libexec/ld-elf.so.1" "--hash-style=both" "--enable-new-dtags" "-o" "a.out" "/usr/lib/crt1.o" "/usr/lib/crti.o" "/usr/lib/crtbegin.o" "-L/usr/lib" "/dev/null" "-lc++" "-lm" "-lgcc" "--as-needed" "-lgcc_s" "--no-as-needed" "-lc" "-lgcc" "--as-needed" "-lgcc_s" "--no-as-needed" "/usr/lib/crtend.o" "/usr/lib/crtn.o" CC_OUTPUT_921dbbb2_58173849=yes CC_OUTPUT_921dbbb2_9bdba57c=yes CC_OUTPUT_921dbbb2_6a4fe7f5=yes CC_OUTPUT_921dbbb2_6bcac02b=yes CC_OUTPUT_921dbbb2_67d20829=yes CC_OUTPUT_921dbbb2_bfa62e83=yes CC_OUTPUT_921dbbb2_f0b4d593=yes CC_OUTPUT_921dbbb2_308abb44=yes CC_OUTPUT_921dbbb2_f00456e5=yes CC_OUTPUT_921dbbb2_65ad290d=yes CC_OUTPUT_921dbbb2_f2776b26=yes CC_OUTPUT_921dbbb2_53255a77=yes CC_OUTPUT_921dbbb2_911cfe02=yes CC_OUTPUT_921dbbb2_b2657cc3=yes CC_OUTPUT_921dbbb2_380987f7=yes CC_OUTPUT_921dbbb2_160933ec=yes CC_OUTPUT_921dbbb2_fb62803b=yes CC_OUTPUT_921dbbb2_af59ad06=yes CC_OUTPUT_921dbbb2_a15f3fcf=yes _OBJC_CCVERSION_921dbbb2=FreeBSD clang version 13.0.0 (git@github.com:llvm/llvm-project.git llvmorg-13.0.0-0-gd7b669b3a303) Target: armv7-unknown-freebsd13.1-gnueabihf Thread model: posix InstalledDir: /usr/bin _OBJC_ALTCCVERSION_921dbbb2=none ARCH=armv7 OPSYS=FreeBSD _OSRELEASE=13.1-RELEASE-p4 OSREL=13.1 OSVERSION=1301000 PYTHONBASE=/usr/local CONFIGURE_MAX_CMD_LEN=524288 HAVE_PORTS_ENV=1 #### Misc Poudriere #### GID=0 UID=0 ---End make.conf--- --Resource limits-- cpu time (seconds, -t) unlimited file size (512-blocks, -f) unlimited data seg size (kbytes, -d) 1048576 stack size (kbytes, -s) 1048576 core file size (512-blocks, -c) unlimited max memory size (kbytes, -m) unlimited locked memory (kbytes, -l) unlimited max user processes (-u) 89999 open files (-n) 1024 virtual mem size (kbytes, -v) unlimited swap limit (kbytes, -w) unlimited socket buffer size (bytes, -b) unlimited pseudo-terminals (-p) unlimited kqueues (-k) unlimited umtx shared locks (-o) unlimited --End resource limits-- =================================================== ===> License BSD2CLAUSE accepted by the user =========================================================================== =================================================== ===> py39-pyscf-2.1.0 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-1.18.4.pkg [131releng-armv7-quarterly-job-01] Installing pkg-1.18.4... [131releng-armv7-quarterly-job-01] Extracting pkg-1.18.4: .......... done ===> py39-pyscf-2.1.0 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of py39-pyscf-2.1.0 =========================================================================== =================================================== =========================================================================== =================================================== ===> License BSD2CLAUSE accepted by the user ===> Fetching all distfiles required by py39-pyscf-2.1.0 for building =========================================================================== =================================================== ===> License BSD2CLAUSE accepted by the user ===> Fetching all distfiles required by py39-pyscf-2.1.0 for building => SHA256 Checksum OK for pyscf-pyscf-v2.1.0_GH0.tar.gz. =========================================================================== =================================================== =========================================================================== =================================================== ===> License BSD2CLAUSE accepted by the user ===> Fetching all distfiles required by py39-pyscf-2.1.0 for building ===> Extracting for py39-pyscf-2.1.0 => SHA256 Checksum OK for pyscf-pyscf-v2.1.0_GH0.tar.gz. =========================================================================== =================================================== =========================================================================== =================================================== ===> Patching for py39-pyscf-2.1.0 ===> Applying FreeBSD patches for py39-pyscf-2.1.0 from /usr/ports/science/py-pyscf/files =========================================================================== =================================================== ===> py39-pyscf-2.1.0 depends on package: py39-numpy>=1.16,1<1.24,1 - not found ===> Installing existing package /packages/All/py39-numpy-1.23.3,1.pkg [131releng-armv7-quarterly-job-01] Installing py39-numpy-1.23.3,1... [131releng-armv7-quarterly-job-01] `-- Installing gcc11-11.3.0_1... [131releng-armv7-quarterly-job-01] | `-- Installing binutils-2.37_4,1... [131releng-armv7-quarterly-job-01] | | `-- Installing gettext-runtime-0.21... [131releng-armv7-quarterly-job-01] | | `-- Installing indexinfo-0.3.1... [131releng-armv7-quarterly-job-01] | | `-- Extracting indexinfo-0.3.1: .... done [131releng-armv7-quarterly-job-01] | | `-- Extracting gettext-runtime-0.21: .......... done [131releng-armv7-quarterly-job-01] | `-- Extracting binutils-2.37_4,1: .......... done [131releng-armv7-quarterly-job-01] | `-- Installing gmp-6.2.1... [131releng-armv7-quarterly-job-01] | `-- Extracting gmp-6.2.1: .......... done [131releng-armv7-quarterly-job-01] | `-- Installing mpc-1.2.1... [131releng-armv7-quarterly-job-01] | | `-- Installing mpfr-4.1.0_1... [131releng-armv7-quarterly-job-01] | | `-- Extracting mpfr-4.1.0_1: .......... done If you prefer to do this manually, replace the following symlinks with either an empty file or your site-local certificate bundle. * /etc/ssl/cert.pem * /usr/local/etc/ssl/cert.pem * /usr/local/openssl/cert.pem ===> py39-pyscf-2.1.0 depends on executable: cmake - found ===> Returning to build of py39-pyscf-2.1.0 ===> py39-pyscf-2.1.0 depends on executable: gmake - not found ===> Installing existing package /packages/All/gmake-4.3_2.pkg [131releng-armv7-quarterly-job-01] Installing gmake-4.3_2... [131releng-armv7-quarterly-job-01] Extracting gmake-4.3_2: .......... done ===> py39-pyscf-2.1.0 depends on executable: gmake - found ===> Returning to build of py39-pyscf-2.1.0 ===> py39-pyscf-2.1.0 depends on executable: gfortran11 - found ===> py39-pyscf-2.1.0 depends on package: py39-setuptools>=63.1.0 - found ===> py39-pyscf-2.1.0 depends on file: /usr/local/bin/python3.9 - found ===> py39-pyscf-2.1.0 depends on file: /usr/local/bin/as - found =========================================================================== =================================================== ===> py39-pyscf-2.1.0 depends on shared library: libcint.so - not found ===> Installing existing package /packages/All/libcint-5.1.6.pkg [131releng-armv7-quarterly-job-01] Installing libcint-5.1.6... [131releng-armv7-quarterly-job-01] Extracting libcint-5.1.6: ........ done ===> py39-pyscf-2.1.0 depends on shared library: libcint.so - found (/usr/local/lib/libcint.so) ===> Returning to build of py39-pyscf-2.1.0 ===> py39-pyscf-2.1.0 depends on shared library: libxc.so - not found ===> Installing existing package /packages/All/libxc-5.2.3_1.pkg [131releng-armv7-quarterly-job-01] Installing libxc-5.2.3_1... [131releng-armv7-quarterly-job-01] Extracting libxc-5.2.3_1: .......... done ===> py39-pyscf-2.1.0 depends on shared library: libxc.so - found (/usr/local/lib/libxc.so) ===> Returning to build of py39-pyscf-2.1.0 ===> py39-pyscf-2.1.0 depends on shared library: libxcfun.so - not found ===> Installing existing package /packages/All/xcfun-2.1.1.1.pkg [131releng-armv7-quarterly-job-01] Installing xcfun-2.1.1.1... [131releng-armv7-quarterly-job-01] Extracting xcfun-2.1.1.1: .......... done ===> py39-pyscf-2.1.0 depends on shared library: libxcfun.so - found (/usr/local/lib/libxcfun.so) ===> Returning to build of py39-pyscf-2.1.0 ===> py39-pyscf-2.1.0 depends on shared library: libopenblas.so - found (/usr/local/lib/libopenblas.so) =========================================================================== =================================================== ===> Configuring for py39-pyscf-2.1.0 running config =========================================================================== =================================================== ===> Building for py39-pyscf-2.1.0 running build running build_ext Configuring extensions cmake -S/wrkdirs/usr/ports/science/py-pyscf/work-py39/pyscf-2.1.0/pyscf/lib -Bbuild/temp.freebsd-13.1-RELEASE-p4-arm-cpython-39 -- The C compiler identification is Clang 13.0.0 -- The CXX compiler identification is Clang 13.0.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Looking for sgemm_ -- Looking for sgemm_ - not found -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Failed -- Looking for pthread_create in pthreads -- Looking for pthread_create in pthreads - not found -- Looking for pthread_create in pthread -- Looking for pthread_create in pthread - found -- Found Threads: TRUE -- Looking for sgemm_ -- Looking for sgemm_ - found -- Found BLAS: /usr/local/lib/libopenblas.so -- Looking for ffsll -- Looking for ffsll - found -- BLAS libraries: /usr/local/lib/libopenblas.so -- Could NOT find OpenMP_C (missing: OpenMP_C_FLAGS OpenMP_C_LIB_NAMES) -- Could NOT find OpenMP_CXX (missing: OpenMP_CXX_FLAGS OpenMP_CXX_LIB_NAMES) -- Could NOT find OpenMP (missing: OpenMP_C_FOUND OpenMP_CXX_FOUND) -- Configuring done -- Generating done -- Build files have been written to: /wrkdirs/usr/ports/science/py-pyscf/work-py39/pyscf-2.1.0/build/temp.freebsd-13.1-RELEASE-p4-arm-cpython-39 Building binaries cmake --build build/temp.freebsd-13.1-RELEASE-p4-arm-cpython-39 -j2 gmake[1]: Entering directory '/wrkdirs/usr/ports/science/py-pyscf/work-py39/pyscf-2.1.0/build/temp.freebsd-13.1-RELEASE-p4-arm-cpython-39' gmake[2]: Entering directory '/wrkdirs/usr/ports/science/py-pyscf/work-py39/pyscf-2.1.0/build/temp.freebsd-13.1-RELEASE-p4-arm-cpython-39' gmake[3]: Entering directory '/wrkdirs/usr/ports/science/py-pyscf/work-py39/pyscf-2.1.0/build/temp.freebsd-13.1-RELEASE-p4-arm-cpython-39' gmake[3]: Entering directory '/wrkdirs/usr/ports/science/py-pyscf/work-py39/pyscf-2.1.0/build/temp.freebsd-13.1-RELEASE-p4-arm-cpython-39' gmake[3]: Leaving directory '/wrkdirs/usr/ports/science/py-pyscf/work-py39/pyscf-2.1.0/build/temp.freebsd-13.1-RELEASE-p4-arm-cpython-39' gmake[3]: Leaving directory '/wrkdirs/usr/ports/science/py-pyscf/work-py39/pyscf-2.1.0/build/temp.freebsd-13.1-RELEASE-p4-arm-cpython-39' gmake[3]: Entering directory '/wrkdirs/usr/ports/science/py-pyscf/work-py39/pyscf-2.1.0/build/temp.freebsd-13.1-RELEASE-p4-arm-cpython-39' gmake[3]: Entering directory '/wrkdirs/usr/ports/science/py-pyscf/work-py39/pyscf-2.1.0/build/temp.freebsd-13.1-RELEASE-p4-arm-cpython-39' [ 1%] Building C object dft/CMakeFiles/xc_itrf.dir/libxc_itrf.c.o [ 2%] Building C object np_helper/CMakeFiles/np_helper.dir/transpose.c.o [ 3%] Building C object np_helper/CMakeFiles/np_helper.dir/pack_tril.c.o [ 4%] Linking C shared library /wrkdirs/usr/ports/science/py-pyscf/work-py39/pyscf-2.1.0/pyscf/lib/libxc_itrf.so gmake[3]: Leaving directory '/wrkdirs/usr/ports/science/py-pyscf/work-py39/pyscf-2.1.0/build/temp.freebsd-13.1-RELEASE-p4-arm-cpython-39' [ 4%] Built target xc_itrf gmake[3]: Entering directory '/wrkdirs/usr/ports/science/py-pyscf/work-py39/pyscf-2.1.0/build/temp.freebsd-13.1-RELEASE-p4-arm-cpython-39' gmake[3]: Leaving directory '/wrkdirs/usr/ports/science/py-pyscf/work-py39/pyscf-2.1.0/build/temp.freebsd-13.1-RELEASE-p4-arm-cpython-39' gmake[3]: Entering directory '/wrkdirs/usr/ports/science/py-pyscf/work-py39/pyscf-2.1.0/build/temp.freebsd-13.1-RELEASE-p4-arm-cpython-39' [ 6%] Building C object np_helper/CMakeFiles/np_helper.dir/npdot.c.o [ 7%] Building C object dft/CMakeFiles/xcfun_itrf.dir/xcfun_itrf.c.o [ 8%] Linking C shared library /wrkdirs/usr/ports/science/py-pyscf/work-py39/pyscf-2.1.0/pyscf/lib/libxcfun_itrf.so [ 9%] Building C object np_helper/CMakeFiles/np_helper.dir/condense.c.o gmake[3]: Leaving directory '/wrkdirs/usr/ports/science/py-pyscf/work-py39/pyscf-2.1.0/build/temp.freebsd-13.1-RELEASE-p4-arm-cpython-39' [ 9%] Built target xcfun_itrf [ 10%] Building C object np_helper/CMakeFiles/np_helper.dir/omp_reduce.c.o [ 12%] Building C object np_helper/CMakeFiles/np_helper.dir/np_helper.c.o [ 13%] Linking C shared library /wrkdirs/usr/ports/science/py-pyscf/work-py39/pyscf-2.1.0/pyscf/lib/libnp_helper.so gmake[3]: Leaving directory '/wrkdirs/usr/ports/science/py-pyscf/work-py39/pyscf-2.1.0/build/temp.freebsd-13.1-RELEASE-p4-arm-cpython-39' [ 13%] Built target np_helper gmake[3]: Entering directory '/wrkdirs/usr/ports/science/py-pyscf/work-py39/pyscf-2.1.0/build/temp.freebsd-13.1-RELEASE-p4-arm-cpython-39' gmake[3]: Entering directory '/wrkdirs/usr/ports/science/py-pyscf/work-py39/pyscf-2.1.0/build/temp.freebsd-13.1-RELEASE-p4-arm-cpython-39' gmake[3]: Leaving directory '/wrkdirs/usr/ports/science/py-pyscf/work-py39/pyscf-2.1.0/build/temp.freebsd-13.1-RELEASE-p4-arm-cpython-39' gmake[3]: Leaving directory '/wrkdirs/usr/ports/science/py-pyscf/work-py39/pyscf-2.1.0/build/temp.freebsd-13.1-RELEASE-p4-arm-cpython-39' gmake[3]: Entering directory '/wrkdirs/usr/ports/science/py-pyscf/work-py39/pyscf-2.1.0/build/temp.freebsd-13.1-RELEASE-p4-arm-cpython-39' gmake[3]: Entering directory '/wrkdirs/usr/ports/science/py-pyscf/work-py39/pyscf-2.1.0/build/temp.freebsd-13.1-RELEASE-p4-arm-cpython-39' [ 14%] Building C object gto/CMakeFiles/cgto.dir/fill_int2c.c.o [ 15%] Building C object mcscf/CMakeFiles/fci.dir/fci_contract.c.o [ 16%] Building C object gto/CMakeFiles/cgto.dir/fill_nr_3c.c.o [ 18%] Building C object gto/CMakeFiles/cgto.dir/fill_r_3c.c.o [ 19%] Building C object gto/CMakeFiles/cgto.dir/fill_int2e.c.o [ 20%] Building C object mcscf/CMakeFiles/fci.dir/fci_contract_nosym.c.o [ 21%] Building C object mcscf/CMakeFiles/fci.dir/fci_rdm.c.o [ 22%] Building C object gto/CMakeFiles/cgto.dir/fill_r_4c.c.o [ 24%] Building C object gto/CMakeFiles/cgto.dir/ft_ao.c.o /wrkdirs/usr/ports/science/py-pyscf/work-py39/pyscf-2.1.0/pyscf/lib/gto/ft_ao.c:228:13: warning: unknown pragma ignored [-Wunknown-pragmas] #pragma GCC ivdep ^ /wrkdirs/usr/ports/science/py-pyscf/work-py39/pyscf-2.1.0/pyscf/lib/gto/ft_ao.c:245:13: warning: unknown pragma ignored [-Wunknown-pragmas] #pragma GCC ivdep ^ /wrkdirs/usr/ports/science/py-pyscf/work-py39/pyscf-2.1.0/pyscf/lib/gto/ft_ao.c:262:13: warning: unknown pragma ignored [-Wunknown-pragmas] #pragma GCC ivdep ^ /wrkdirs/usr/ports/science/py-pyscf/work-py39/pyscf-2.1.0/pyscf/lib/gto/ft_ao.c:288:13: warning: unknown pragma ignored [-Wunknown-pragmas] #pragma GCC ivdep ^ /wrkdirs/usr/ports/science/py-pyscf/work-py39/pyscf-2.1.0/pyscf/lib/gto/ft_ao.c:298:13: warning: unknown pragma ignored [-Wunknown-pragmas] #pragma GCC ivdep ^ /wrkdirs/usr/ports/science/py-pyscf/work-py39/pyscf-2.1.0/pyscf/lib/gto/ft_ao.c:494:13: warning: unknown pragma ignored [-Wunknown-pragmas] #pragma GCC ivdep ^ /wrkdirs/usr/ports/science/py-pyscf/work-py39/pyscf-2.1.0/pyscf/lib/gto/ft_ao.c:635:9: error: unknown type name 'int8_t'; did you mean '__int8_t'? int8_t *empty = (int8_t *)(csz + nz); ^~~~~~ __int8_t /usr/include/machine/_types.h:51:22: note: '__int8_t' declared here typedef signed char __int8_t; ^ /wrkdirs/usr/ports/science/py-pyscf/work-py39/pyscf-2.1.0/pyscf/lib/gto/ft_ao.c:635:34: error: expected expression int8_t *empty = (int8_t *)(csz + nz); ^ /wrkdirs/usr/ports/science/py-pyscf/work-py39/pyscf-2.1.0/pyscf/lib/gto/ft_ao.c:635:26: error: use of undeclared identifier 'int8_t' int8_t *empty = (int8_t *)(csz + nz); ^ /wrkdirs/usr/ports/science/py-pyscf/work-py39/pyscf-2.1.0/pyscf/lib/gto/ft_ao.c:636:9: error: unknown type name 'int8_t'; did you mean '__int8_t'? int8_t *xempty = empty; ^~~~~~ __int8_t /usr/include/machine/_types.h:51:22: note: '__int8_t' declared here typedef signed char __int8_t; ^ /wrkdirs/usr/ports/science/py-pyscf/work-py39/pyscf-2.1.0/pyscf/lib/gto/ft_ao.c:637:9: error: unknown type name 'int8_t'; did you mean '__int8_t'? int8_t *yempty = xempty + nx; ^~~~~~ __int8_t /usr/include/machine/_types.h:51:22: note: '__int8_t' declared here typedef signed char __int8_t; ^ /wrkdirs/usr/ports/science/py-pyscf/work-py39/pyscf-2.1.0/pyscf/lib/gto/ft_ao.c:638:9: error: unknown type name 'int8_t'; did you mean '__int8_t'? int8_t *zempty = yempty + ny; ^~~~~~ __int8_t /usr/include/machine/_types.h:51:22: note: '__int8_t' declared here typedef signed char __int8_t; ^ 6 warnings and 6 errors generated. gmake[3]: *** [gto/CMakeFiles/cgto.dir/build.make:146: gto/CMakeFiles/cgto.dir/ft_ao.c.o] Error 1 gmake[3]: Leaving directory '/wrkdirs/usr/ports/science/py-pyscf/work-py39/pyscf-2.1.0/build/temp.freebsd-13.1-RELEASE-p4-arm-cpython-39' gmake[2]: *** [CMakeFiles/Makefile2:292: gto/CMakeFiles/cgto.dir/all] Error 2 gmake[2]: *** Waiting for unfinished jobs.... [ 25%] Building C object mcscf/CMakeFiles/fci.dir/fci_string.c.o [ 26%] Building C object mcscf/CMakeFiles/fci.dir/fci_4pdm.c.o [ 27%] Building C object mcscf/CMakeFiles/fci.dir/select_ci.c.o [ 28%] Linking C shared library /wrkdirs/usr/ports/science/py-pyscf/work-py39/pyscf-2.1.0/pyscf/lib/libfci.so gmake[3]: Leaving directory '/wrkdirs/usr/ports/science/py-pyscf/work-py39/pyscf-2.1.0/build/temp.freebsd-13.1-RELEASE-p4-arm-cpython-39' [ 28%] Built target fci gmake[2]: Leaving directory '/wrkdirs/usr/ports/science/py-pyscf/work-py39/pyscf-2.1.0/build/temp.freebsd-13.1-RELEASE-p4-arm-cpython-39' gmake[1]: *** [Makefile:91: all] Error 2 gmake[1]: Leaving directory '/wrkdirs/usr/ports/science/py-pyscf/work-py39/pyscf-2.1.0/build/temp.freebsd-13.1-RELEASE-p4-arm-cpython-39' error: command '/usr/local/bin/cmake' failed with exit code 2 *** Error code 1 Stop. make: stopped in /usr/ports/science/py-pyscf