[package - main-arm64-default][science/yoda] Failed for yoda-1.9.4 in package

From: <pkg-fallout_at_FreeBSD.org>
Date: Thu, 09 Jun 2022 17:29:51 UTC
You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer:     yuri@FreeBSD.org
Log URL:        http://ampere2.nyi.freebsd.org/data/main-arm64-default/p3d6de3b1feb4_s81c857dd7e/logs/yoda-1.9.4.log
Build URL:      http://ampere2.nyi.freebsd.org/build.html?mastername=main-arm64-default&build=p3d6de3b1feb4_s81c857dd7e
Log:

=>> Building science/yoda
build started at Thu Jun  9 17:19:32 UTC 2022
port directory: /usr/ports/science/yoda
package name: yoda-1.9.4
building for: FreeBSD main-arm64-default-job-02 14.0-CURRENT FreeBSD 14.0-CURRENT 1400060 arm64
maintained by: yuri@FreeBSD.org
Makefile ident: 
Poudriere version: 3.2.8-21-g883afb07
Host OSVERSION: 1400050
Jail OSVERSION: 1400060
Job Id: 02




!!! Jail is newer than host. (Jail: 1400060, Host: 1400050) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



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---Begin OPTIONS List---
===> The following configuration options are available for yoda-1.9.4:
     PYTHON=on: Python bindings or support
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
yuri@FreeBSD.org
--End MAINTAINER--

--CONFIGURE_ARGS--
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--PLIST_SUB--
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--End PLIST_SUB--

--SUB_LIST--
PYTHON="" NO_PYTHON="@comment " PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/yoda DOCSDIR=/usr/local/share/doc/yoda EXAMPLESDIR=/usr/local/share/examples/yoda  WWWDIR=/usr/local/www/yoda ETCDIR=/usr/local/etc/yoda
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=======================<phase: check-sanity   >============================
===>  License GPLv3 accepted by the user
===========================================================================
=======================<phase: pkg-depends    >============================
===>   yoda-1.9.4 depends on file: /usr/local/sbin/pkg - not found
===>   Installing existing package /packages/All/pkg-1.17.5_1.pkg
[main-arm64-default-job-02] Installing pkg-1.17.5_1...
[main-arm64-default-job-02] Extracting pkg-1.17.5_1: .......... done
===>   yoda-1.9.4 depends on file: /usr/local/sbin/pkg - found
===>   Returning to build of yoda-1.9.4
===========================================================================
=======================<phase: fetch-depends  >============================
===========================================================================
=======================<phase: fetch          >============================
===>  License GPLv3 accepted by the user
===> Fetching all distfiles required by yoda-1.9.4 for building
===========================================================================
=======================<phase: checksum       >============================
===>  License GPLv3 accepted by the user
===> Fetching all distfiles required by yoda-1.9.4 for building
=> SHA256 Checksum OK for YODA-1.9.4.tar.gz.
===========================================================================
=======================<phase: extract-depends>============================
===========================================================================
=======================<phase: extract        >============================
===>  License GPLv3 accepted by the user
===> Fetching all distfiles required by yoda-1.9.4 for building
===>  Extracting for yoda-1.9.4
=> SHA256 Checksum OK for YODA-1.9.4.tar.gz.
===========================================================================
=======================<phase: patch-depends  >============================
===========================================================================
=======================<phase: patch          >============================
===>  Patching for yoda-1.9.4
===========================================================================
=======================<phase: build-depends  >============================
===>   yoda-1.9.4 depends on package: gmake>=4.3 - not found
===>   Installing existing package /packages/All/gmake-4.3_2.pkg
[main-arm64-default-job-02] Installing gmake-4.3_2...
[main-arm64-default-job-02] `-- Installing gettext-runtime-0.21...
[main-arm64-default-job-02] |   `-- Installing indexinfo-0.3.1...
[main-arm64-default-job-02] |   `-- Extracting indexinfo-0.3.1: .... done
[main-arm64-default-job-02] `-- Extracting gettext-runtime-0.21: .......... done
<snip>
#define Py_DEPRECATED(VERSION_UNUSED) __attribute__((__deprecated__))
                                                     ^
/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext/yoda/core.cpp:136030:3: warning: 'tp_print' is deprecated [-Wdeprecated-declarations]
  0, /*tp_print*/
  ^
/usr/local/include/python3.8/cpython/object.h:260:5: note: 'tp_print' has been explicitly marked deprecated here
    Py_DEPRECATED(3.8) int (*tp_print)(PyObject *, FILE *, int);
    ^
/usr/local/include/python3.8/pyport.h:515:54: note: expanded from macro 'Py_DEPRECATED'
#define Py_DEPRECATED(VERSION_UNUSED) __attribute__((__deprecated__))
                                                     ^
/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext/yoda/core.cpp:136148:3: warning: 'tp_print' is deprecated [-Wdeprecated-declarations]
  0, /*tp_print*/
  ^
/usr/local/include/python3.8/cpython/object.h:260:5: note: 'tp_print' has been explicitly marked deprecated here
    Py_DEPRECATED(3.8) int (*tp_print)(PyObject *, FILE *, int);
    ^
/usr/local/include/python3.8/pyport.h:515:54: note: expanded from macro 'Py_DEPRECATED'
#define Py_DEPRECATED(VERSION_UNUSED) __attribute__((__deprecated__))
                                                     ^
/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext/yoda/core.cpp:136261:3: warning: 'tp_print' is deprecated [-Wdeprecated-declarations]
  0, /*tp_print*/
  ^
/usr/local/include/python3.8/cpython/object.h:260:5: note: 'tp_print' has been explicitly marked deprecated here
    Py_DEPRECATED(3.8) int (*tp_print)(PyObject *, FILE *, int);
    ^
/usr/local/include/python3.8/pyport.h:515:54: note: expanded from macro 'Py_DEPRECATED'
#define Py_DEPRECATED(VERSION_UNUSED) __attribute__((__deprecated__))
                                                     ^
/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext/yoda/core.cpp:136379:3: warning: 'tp_print' is deprecated [-Wdeprecated-declarations]
  0, /*tp_print*/
  ^
/usr/local/include/python3.8/cpython/object.h:260:5: note: 'tp_print' has been explicitly marked deprecated here
    Py_DEPRECATED(3.8) int (*tp_print)(PyObject *, FILE *, int);
    ^
/usr/local/include/python3.8/pyport.h:515:54: note: expanded from macro 'Py_DEPRECATED'
#define Py_DEPRECATED(VERSION_UNUSED) __attribute__((__deprecated__))
                                                     ^
/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext/yoda/core.cpp:136492:3: warning: 'tp_print' is deprecated [-Wdeprecated-declarations]
  0, /*tp_print*/
  ^
/usr/local/include/python3.8/cpython/object.h:260:5: note: 'tp_print' has been explicitly marked deprecated here
    Py_DEPRECATED(3.8) int (*tp_print)(PyObject *, FILE *, int);
    ^
/usr/local/include/python3.8/pyport.h:515:54: note: expanded from macro 'Py_DEPRECATED'
#define Py_DEPRECATED(VERSION_UNUSED) __attribute__((__deprecated__))
                                                     ^
/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext/yoda/core.cpp:136610:3: warning: 'tp_print' is deprecated [-Wdeprecated-declarations]
  0, /*tp_print*/
  ^
/usr/local/include/python3.8/cpython/object.h:260:5: note: 'tp_print' has been explicitly marked deprecated here
    Py_DEPRECATED(3.8) int (*tp_print)(PyObject *, FILE *, int);
    ^
/usr/local/include/python3.8/pyport.h:515:54: note: expanded from macro 'Py_DEPRECATED'
#define Py_DEPRECATED(VERSION_UNUSED) __attribute__((__deprecated__))
                                                     ^
/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext/yoda/core.cpp:136727:3: warning: 'tp_print' is deprecated [-Wdeprecated-declarations]
  0, /*tp_print*/
  ^
/usr/local/include/python3.8/cpython/object.h:260:5: note: 'tp_print' has been explicitly marked deprecated here
    Py_DEPRECATED(3.8) int (*tp_print)(PyObject *, FILE *, int);
    ^
/usr/local/include/python3.8/pyport.h:515:54: note: expanded from macro 'Py_DEPRECATED'
#define Py_DEPRECATED(VERSION_UNUSED) __attribute__((__deprecated__))
                                                     ^
/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext/yoda/core.cpp:136866:3: warning: 'tp_print' is deprecated [-Wdeprecated-declarations]
  0, /*tp_print*/
  ^
/usr/local/include/python3.8/cpython/object.h:260:5: note: 'tp_print' has been explicitly marked deprecated here
    Py_DEPRECATED(3.8) int (*tp_print)(PyObject *, FILE *, int);
    ^
/usr/local/include/python3.8/pyport.h:515:54: note: expanded from macro 'Py_DEPRECATED'
#define Py_DEPRECATED(VERSION_UNUSED) __attribute__((__deprecated__))
                                                     ^
/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext/yoda/core.cpp:136979:3: warning: 'tp_print' is deprecated [-Wdeprecated-declarations]
  0, /*tp_print*/
  ^
/usr/local/include/python3.8/cpython/object.h:260:5: note: 'tp_print' has been explicitly marked deprecated here
    Py_DEPRECATED(3.8) int (*tp_print)(PyObject *, FILE *, int);
    ^
/usr/local/include/python3.8/pyport.h:515:54: note: expanded from macro 'Py_DEPRECATED'
#define Py_DEPRECATED(VERSION_UNUSED) __attribute__((__deprecated__))
                                                     ^
/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext/yoda/core.cpp:137092:3: warning: 'tp_print' is deprecated [-Wdeprecated-declarations]
  0, /*tp_print*/
  ^
/usr/local/include/python3.8/cpython/object.h:260:5: note: 'tp_print' has been explicitly marked deprecated here
    Py_DEPRECATED(3.8) int (*tp_print)(PyObject *, FILE *, int);
    ^
/usr/local/include/python3.8/pyport.h:515:54: note: expanded from macro 'Py_DEPRECATED'
#define Py_DEPRECATED(VERSION_UNUSED) __attribute__((__deprecated__))
                                                     ^
/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext/yoda/core.cpp:141863:21: warning: fallthrough annotation in unreachable code [-Wunreachable-code-fallthrough]
                    CYTHON_FALLTHROUGH;
                    ^
/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext/yoda/core.cpp:284:34: note: expanded from macro 'CYTHON_FALLTHROUGH'
      #define CYTHON_FALLTHROUGH [[fallthrough]]
                                 ^
/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext/yoda/core.cpp:141874:21: warning: fallthrough annotation in unreachable code [-Wunreachable-code-fallthrough]
                    CYTHON_FALLTHROUGH;
                    ^
/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext/yoda/core.cpp:284:34: note: expanded from macro 'CYTHON_FALLTHROUGH'
      #define CYTHON_FALLTHROUGH [[fallthrough]]
                                 ^
/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext/yoda/core.cpp:142574:21: warning: fallthrough annotation in unreachable code [-Wunreachable-code-fallthrough]
                    CYTHON_FALLTHROUGH;
                    ^
/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext/yoda/core.cpp:284:34: note: expanded from macro 'CYTHON_FALLTHROUGH'
      #define CYTHON_FALLTHROUGH [[fallthrough]]
                                 ^
/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext/yoda/core.cpp:142585:21: warning: fallthrough annotation in unreachable code [-Wunreachable-code-fallthrough]
                    CYTHON_FALLTHROUGH;
                    ^
/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext/yoda/core.cpp:284:34: note: expanded from macro 'CYTHON_FALLTHROUGH'
      #define CYTHON_FALLTHROUGH [[fallthrough]]
                                 ^
/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext/yoda/core.cpp:143692:5: warning: 'tp_print' is deprecated [-Wdeprecated-declarations]
    0,
    ^
/usr/local/include/python3.8/cpython/object.h:260:5: note: 'tp_print' has been explicitly marked deprecated here
    Py_DEPRECATED(3.8) int (*tp_print)(PyObject *, FILE *, int);
    ^
/usr/local/include/python3.8/pyport.h:515:54: note: expanded from macro 'Py_DEPRECATED'
#define Py_DEPRECATED(VERSION_UNUSED) __attribute__((__deprecated__))
                                                     ^
/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext/yoda/core.cpp:146130:5: warning: 'tp_print' is deprecated [-Wdeprecated-declarations]
    0,
    ^
/usr/local/include/python3.8/cpython/object.h:260:5: note: 'tp_print' has been explicitly marked deprecated here
    Py_DEPRECATED(3.8) int (*tp_print)(PyObject *, FILE *, int);
    ^
/usr/local/include/python3.8/pyport.h:515:54: note: expanded from macro 'Py_DEPRECATED'
#define Py_DEPRECATED(VERSION_UNUSED) __attribute__((__deprecated__))
                                                     ^
43 warnings generated.
c++ -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -I/usr/include -I/usr/include -fPIC -I/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/include -I/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/include -I/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext/yoda -I/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext/yoda -I/usr/local/include/python3.8 -c yoda/errors.cpp -o /wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext/build/temp.freebsd-14.0-CURRENT-arm64-cpython-38/yoda/errors.o -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wno-unused-but-set-variable -Wno-sign-compare -Wno-strict-prototypes
c++ -shared -L/usr/local/lib -fstack-protector-strong -fstack-protector-strong -L/usr/lib -L/usr/lib -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -I/usr/include -I/usr/include /wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext/build/temp.freebsd-14.0-CURRENT-arm64-cpython-38/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext/yoda/core.o /wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext/build/temp.freebsd-14.0-CURRENT-arm64-cpython-38/yoda/errors.o -L/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/src/.libs -L/usr/local/lib -lstdc++ -lYODA -o /wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext/build/lib.freebsd-14.0-CURRENT-arm64-cpython-38/yoda/core.cpython-38.so -L/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/src/.libs
gmake[4]: Entering directory '/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext'
CC="c++" CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing   -Wno-unused-but-set-variable -Wno-sign-compare -Wno-strict-prototypes" ARCHFLAGS=""  /usr/local/bin/python3.8 \
  /wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext/setup.py install \
    --root "/wrkdirs/usr/ports/science/yoda/work/stage///" \
    --prefix "/usr/local" \
    --verbose \
    --skip-build \
    --force 
running install
running install_lib
creating /wrkdirs/usr/ports/science/yoda/work/stage/usr/local/lib/python3.8
creating /wrkdirs/usr/ports/science/yoda/work/stage/usr/local/lib/python3.8/site-packages
creating /wrkdirs/usr/ports/science/yoda/work/stage/usr/local/lib/python3.8/site-packages/yoda
copying build/lib.freebsd-14.0-CURRENT-arm64-cpython-38/yoda/__init__.py -> /wrkdirs/usr/ports/science/yoda/work/stage///usr/local/lib/python3.8/site-packages/yoda
copying build/lib.freebsd-14.0-CURRENT-arm64-cpython-38/yoda/root.py -> /wrkdirs/usr/ports/science/yoda/work/stage///usr/local/lib/python3.8/site-packages/yoda
copying build/lib.freebsd-14.0-CURRENT-arm64-cpython-38/yoda/util.cpython-38.so -> /wrkdirs/usr/ports/science/yoda/work/stage///usr/local/lib/python3.8/site-packages/yoda
copying build/lib.freebsd-14.0-CURRENT-arm64-cpython-38/yoda/core.cpython-38.so -> /wrkdirs/usr/ports/science/yoda/work/stage///usr/local/lib/python3.8/site-packages/yoda
copying build/lib.freebsd-14.0-CURRENT-arm64-cpython-38/yoda/search.py -> /wrkdirs/usr/ports/science/yoda/work/stage///usr/local/lib/python3.8/site-packages/yoda
copying build/lib.freebsd-14.0-CURRENT-arm64-cpython-38/yoda/plotting.py -> /wrkdirs/usr/ports/science/yoda/work/stage///usr/local/lib/python3.8/site-packages/yoda
copying build/lib.freebsd-14.0-CURRENT-arm64-cpython-38/yoda/script_helpers.py -> /wrkdirs/usr/ports/science/yoda/work/stage///usr/local/lib/python3.8/site-packages/yoda
creating /wrkdirs/usr/ports/science/yoda/work/stage/usr/local/lib/python3.8/site-packages/yoda1
copying build/lib.freebsd-14.0-CURRENT-arm64-cpython-38/yoda1/__init__.py -> /wrkdirs/usr/ports/science/yoda/work/stage///usr/local/lib/python3.8/site-packages/yoda1
byte-compiling /wrkdirs/usr/ports/science/yoda/work/stage///usr/local/lib/python3.8/site-packages/yoda/__init__.py to __init__.cpython-38.pyc
byte-compiling /wrkdirs/usr/ports/science/yoda/work/stage///usr/local/lib/python3.8/site-packages/yoda/root.py to root.cpython-38.pyc
byte-compiling /wrkdirs/usr/ports/science/yoda/work/stage///usr/local/lib/python3.8/site-packages/yoda/search.py to search.cpython-38.pyc
byte-compiling /wrkdirs/usr/ports/science/yoda/work/stage///usr/local/lib/python3.8/site-packages/yoda/plotting.py to plotting.cpython-38.pyc
byte-compiling /wrkdirs/usr/ports/science/yoda/work/stage///usr/local/lib/python3.8/site-packages/yoda/script_helpers.py to script_helpers.cpython-38.pyc
byte-compiling /wrkdirs/usr/ports/science/yoda/work/stage///usr/local/lib/python3.8/site-packages/yoda1/__init__.py to __init__.cpython-38.pyc
running install_egg_info
running egg_info
creating yoda.egg-info
writing yoda.egg-info/PKG-INFO
writing dependency_links to yoda.egg-info/dependency_links.txt
writing top-level names to yoda.egg-info/top_level.txt
writing manifest file 'yoda.egg-info/SOURCES.txt'
reading manifest file 'yoda.egg-info/SOURCES.txt'
writing manifest file 'yoda.egg-info/SOURCES.txt'
Copying yoda.egg-info to /wrkdirs/usr/ports/science/yoda/work/stage///usr/local/lib/python3.8/site-packages/yoda-1.9.4-py3.8.egg-info
running install_scripts
/usr/local/lib/python3.8/site-packages/setuptools/command/install.py:34: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools.
  warnings.warn(
gmake[4]: Nothing to be done for 'install-data-am'.
gmake[4]: Leaving directory '/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext'
gmake[3]: Leaving directory '/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext'
gmake[2]: Leaving directory '/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4/pyext'
gmake[2]: Entering directory '/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4'
gmake[3]: Entering directory '/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4'
gmake[3]: Nothing to be done for 'install-exec-am'.
 /bin/mkdir -p '/wrkdirs/usr/ports/science/yoda/work/stage/usr/local/lib/pkgconfig'
 install  -m 0644 yoda.pc '/wrkdirs/usr/ports/science/yoda/work/stage/usr/local/lib/pkgconfig'
gmake[3]: Leaving directory '/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4'
gmake[2]: Leaving directory '/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4'
gmake[1]: Leaving directory '/wrkdirs/usr/ports/science/yoda/work/YODA-1.9.4'
/usr/bin/strip /wrkdirs/usr/ports/science/yoda/work/stage/usr/local/lib/libYODA.so
====> Compressing man pages (compress-man)
===========================================================================
=======================<phase: package        >============================
===>  Building package for yoda-1.9.4
pkg-static: pkg_checksum_hash_sha256_file(read failed): Is a directory
*** Error code 1

Stop.
make: stopped in /usr/ports/science/yoda