[package - main-armv7-default][science/cp2k] Failed for cp2k-9.1.0 in configure
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Date: Sat, 04 Jun 2022 22:39:33 UTC
You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.
Maintainer: yuri@FreeBSD.org
Log URL: http://beefy12.nyi.freebsd.org/data/main-armv7-default/pf5cfa9d4157c_s245b056556/logs/cp2k-9.1.0.log
Build URL: http://beefy12.nyi.freebsd.org/build.html?mastername=main-armv7-default&build=pf5cfa9d4157c_s245b056556
Log:
=>> Building science/cp2k
build started at Sat Jun 4 22:39:06 UTC 2022
port directory: /usr/ports/science/cp2k
package name: cp2k-9.1.0
building for: FreeBSD main-armv7-default-job-05 14.0-CURRENT FreeBSD 14.0-CURRENT 1400059 arm
maintained by: yuri@FreeBSD.org
Makefile ident:
Poudriere version: 3.2.8-21-g883afb07
Host OSVERSION: 1400050
Jail OSVERSION: 1400059
Job Id: 05
!!! Jail is newer than host. (Jail: 1400059, Host: 1400050) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!
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---Begin OPTIONS List---
===> The following configuration options are available for cp2k-9.1.0:
LIBINT=on: Use libint to evaluate integrals
====> Multiprocessing: you have to select exactly one of them
SERIAL=off: Single core (no multiprocessing)
OPENMP=on: Parallel processing support via OpenMP
MPI=off: MPI (Message Passing Interface) support
OPENMP_MPI=off: Enable both OpenMP and MPI
===> Use 'make config' to modify these settings
---End OPTIONS List---
--MAINTAINER--
yuri@FreeBSD.org
--End MAINTAINER--
--CONFIGURE_ARGS--
--End CONFIGURE_ARGS--
--CONFIGURE_ENV--
F77="gfortran10" FC="gfortran10" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc10" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc10 -fallow-argument-mismatch" MAKE=gmake PYTHON="/usr/local/bin/python3.8" XDG_DATA_HOME=/wrkdirs/usr/ports/science/cp2k/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/cp2k/work XDG_CACHE_HOME=/wrkdirs/usr/ports/science/cp2k/work/.cache HOME=/wrkdirs/usr/ports/science/cp2k/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/cp2k/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin SHELL=/bin/sh CONFIG_SHELL=/bin/sh CMAKE_PREFIX_PATH="/usr/local"
--End CONFIGURE_ENV--
--MAKE_ENV--
F77="gfortran10" FC="gfortran10" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc10" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc10 -fallow-argument-mismatch" XDG_DATA_HOME=/wrkdirs/usr/ports/science/cp2k/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/cp2k/work XDG_CACHE_HOME=/wrkdirs/usr/ports/science/cp2k/work/.cache HOME=/wrkdirs/usr/ports/science/cp2k/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/cp2k/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES ADDR2LINE="/usr/local/bin/addr2line" AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" PREFIX=/usr/local LOCALBASE=/usr/local CC="/nxb-bin/us
r/bin/cc" CFLAGS="-O2 -pipe -fopenmp -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing " CPP="/nxb-bin/usr/bin/cpp" CPPFLAGS="-isystem /usr/local/include" LDFLAGS=" /usr/lib/libgomp.so -Wl,-rpath=/usr/local/lib/gcc10 -L/usr/local/lib/gcc10 -B/usr/local/bin -fstack-protector-strong -L/usr/local/lib " LIBS="" CXX="/nxb-bin/usr/bin/c++" CXXFLAGS="-O2 -pipe -fopenmp -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -fopenmp -isystem /usr/local/include " MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444"
--End MAKE_ENV--
--PLIST_SUB--
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--End PLIST_SUB--
--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/cp2k DOCSDIR=/usr/local/share/doc/cp2k EXAMPLESDIR=/usr/local/share/examples/cp2k WWWDIR=/usr/local/www/cp2k ETCDIR=/usr/local/etc/cp2k
--End SUB_LIST--
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core file size (512-blocks, -c) unlimited
max memory size (kbytes, -m) unlimited
locked memory (kbytes, -l) unlimited
max user processes (-u) 89999
open files (-n) 1024
virtual mem size (kbytes, -v) unlimited
swap limit (kbytes, -w) unlimited
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=======================<phase: check-sanity >============================
===> License GPLv2+ accepted by the user
===========================================================================
=======================<phase: pkg-depends >============================
===> cp2k-9.1.0 depends on file: /usr/local/sbin/pkg - not found
===> Installing existing package /packages/All/pkg-1.17.5_1.pkg
[main-armv7-default-job-05] Installing pkg-1.17.5_1...
[main-armv7-default-job-05] Extracting pkg-1.17.5_1: .......... done
===> cp2k-9.1.0 depends on file: /usr/local/sbin/pkg - found
===> Returning to build of cp2k-9.1.0
===========================================================================
=======================<phase: fetch-depends >============================
===========================================================================
=======================<phase: fetch >============================
===> License GPLv2+ accepted by the user
=> cp2k-dbcsr-f4df17b_GH0.tar.gz doesn't seem to exist in /portdistfiles/.
=> Attempting to fetch https://codeload.github.com/cp2k/dbcsr/tar.gz/f4df17b?dummy=/cp2k-dbcsr-f4df17b_GH0.tar.gz
fetch: https://codeload.github.com/cp2k/dbcsr/tar.gz/f4df17b?dummy=/cp2k-dbcsr-f4df17b_GH0.tar.gz: size unknown
fetch: https://codeload.github.com/cp2k/dbcsr/tar.gz/f4df17b?dummy=/cp2k-dbcsr-f4df17b_GH0.tar.gz: size of remote file is not known
cp2k-dbcsr-f4df17b_GH0.tar.gz 2600 kB 5540 kBps 01s
=> pseewald-fprettify-71781aa_GH0.tar.gz doesn't seem to exist in /portdistfiles/.
=> Attempting to fetch https://codeload.github.com/pseewald/fprettify/tar.gz/71781aa?dummy=/pseewald-fprettify-71781aa_GH0.tar.gz
fetch: https://codeload.github.com/pseewald/fprettify/tar.gz/71781aa?dummy=/pseewald-fprettify-71781aa_GH0.tar.gz: size unknown
fetch: https://codeload.github.com/pseewald/fprettify/tar.gz/71781aa?dummy=/pseewald-fprettify-71781aa_GH0.tar.gz: size of remote file is not known
pseewald-fprettify-71781aa_GH0.tar.gz 151 kB 6274 kBps 00s
===> Fetching all distfiles required by cp2k-9.1.0 for building
===========================================================================
=======================<phase: checksum >============================
===> License GPLv2+ accepted by the user
===> Fetching all distfiles required by cp2k-9.1.0 for building
=> SHA256 Checksum OK for cp2k-cp2k-v9.1.0_GH0.tar.gz.
=> SHA256 Checksum OK for cp2k-dbcsr-f4df17b_GH0.tar.gz.
=> SHA256 Checksum OK for pseewald-fprettify-71781aa_GH0.tar.gz.
===========================================================================
=======================<phase: extract-depends>============================
===========================================================================
=======================<phase: extract >============================
===> License GPLv2+ accepted by the user
===> Fetching all distfiles required by cp2k-9.1.0 for building
===> Extracting for cp2k-9.1.0
=> SHA256 Checksum OK for cp2k-cp2k-v9.1.0_GH0.tar.gz.
=> SHA256 Checksum OK for cp2k-dbcsr-f4df17b_GH0.tar.gz.
=> SHA256 Checksum OK for pseewald-fprettify-71781aa_GH0.tar.gz.
===========================================================================
=======================<phase: patch-depends >============================
===========================================================================
=======================<phase: patch >============================
===> Patching for cp2k-9.1.0
===> Applying FreeBSD patches for cp2k-9.1.0 from /usr/ports/science/cp2k/files
===========================================================================
=======================<phase: build-depends >============================
===> cp2k-9.1.0 depends on executable: fypp - not found
===> Installing existing package /packages/All/py38-fypp-3.1.pkg
[main-armv7-default-job-05] Installing py38-fypp-3.1...
[main-armv7-default-job-05] `-- Installing py38-setuptools-57.0.0...
[main-armv7-default-job-05] | `-- Installing python38-3.8.13_2...
[main-armv7-default-job-05] | | `-- Installing gettext-runtime-0.21...
[main-armv7-default-job-05] | | `-- Installing indexinfo-0.3.1...
[main-armv7-default-job-05] | | `-- Extracting indexinfo-0.3.1: .... done
[main-armv7-default-job-05] | | `-- Extracting gettext-runtime-0.21: .......... done
[main-armv7-default-job-05] | | `-- Installing libffi-3.4.2...
[main-armv7-default-job-05] | | `-- Extracting libffi-3.4.2: .......... done
[main-armv7-default-job-05] | | `-- Installing mpdecimal-2.5.1...
[main-armv7-default-job-05] | | `-- Extracting mpdecimal-2.5.1: .......... done
[main-armv7-default-job-05] | | `-- Installing readline-8.1.2...
[main-armv7-default-job-05] | | `-- Extracting readline-8.1.2: .......... done
[main-armv7-default-job-05] | `-- Extracting python38-3.8.13_2: .......... done
[main-armv7-default-job-05] `-- Extracting py38-setuptools-57.0.0: .......... done
[main-armv7-default-job-05] Extracting py38-fypp-3.1: .......... done
=====
Message from python38-3.8.13_2:
--
Note that some standard Python modules are provided as separate ports
as they require additional dependencies. They are available as:
py38-gdbm databases/py-gdbm@py38
py38-sqlite3 databases/py-sqlite3@py38
py38-tkinter x11-toolkits/py-tkinter@py38
===> cp2k-9.1.0 depends on executable: fypp - found
===> Returning to build of cp2k-9.1.0
===> cp2k-9.1.0 depends on executable: gfortran10 - not found
===> Installing existing package /packages/All/gcc10-10.3.0.pkg
[main-armv7-default-job-05] Installing gcc10-10.3.0...
[main-armv7-default-job-05] `-- Installing binutils-2.37_2,1...
[main-armv7-default-job-05] `-- Extracting binutils-2.37_2,1: .......... done
[main-armv7-default-job-05] `-- Installing gmp-6.2.1...
[main-armv7-default-job-05] `-- Extracting gmp-6.2.1: .......... done
[main-armv7-default-job-05] `-- Installing mpc-1.2.1...
[main-armv7-default-job-05] | `-- Installing mpfr-4.1.0_1...
[main-armv7-default-job-05] | `-- Extracting mpfr-4.1.0_1: .......... done
[main-armv7-default-job-05] `-- Extracting mpc-1.2.1: ......... done
[main-armv7-default-job-05] Extracting gcc10-10.3.0: .......... done
=====
Message from gcc10-10.3.0:
--
To ensure binaries built with this toolchain find appropriate versions
of the necessary run-time libraries, you may want to link using
-Wl,-rpath=/usr/local/lib/gcc10
For ports leveraging USE_GCC, USES=compiler, or USES=fortran this happens
transparently.
===> cp2k-9.1.0 depends on executable: gfortran10 - found
===> Returning to build of cp2k-9.1.0
===> cp2k-9.1.0 depends on package: gmake>=4.3 - not found
===> Installing existing package /packages/All/gmake-4.3_2.pkg
[main-armv7-default-job-05] Installing gmake-4.3_2...
[main-armv7-default-job-05] Extracting gmake-4.3_2: .......... done
===> cp2k-9.1.0 depends on package: gmake>=4.3 - found
===> Returning to build of cp2k-9.1.0
===> cp2k-9.1.0 depends on file: /usr/local/bin/python3.8 - found
===> cp2k-9.1.0 depends on file: /usr/local/bin/as - found
===========================================================================
=======================<phase: lib-depends >============================
===> cp2k-9.1.0 depends on shared library: libblas.so - not found
===> Installing existing package /packages/All/blas-3.10.1.pkg
[main-armv7-default-job-05] Installing blas-3.10.1...
[main-armv7-default-job-05] Extracting blas-3.10.1: ........ done
===> cp2k-9.1.0 depends on shared library: libblas.so - found (/usr/local/lib/libblas.so)
===> Returning to build of cp2k-9.1.0
===> cp2k-9.1.0 depends on shared library: libfftw3.so - not found
===> Installing existing package /packages/All/fftw3-3.3.10.pkg
[main-armv7-default-job-05] Installing fftw3-3.3.10...
[main-armv7-default-job-05] Extracting fftw3-3.3.10: .......... done
===> cp2k-9.1.0 depends on shared library: libfftw3.so - found (/usr/local/lib/libfftw3.so)
===> Returning to build of cp2k-9.1.0
===> cp2k-9.1.0 depends on shared library: liblapack.so - not found
===> Installing existing package /packages/All/lapack-3.10.1.pkg
[main-armv7-default-job-05] Installing lapack-3.10.1...
[main-armv7-default-job-05] Extracting lapack-3.10.1: .......... done
===> cp2k-9.1.0 depends on shared library: liblapack.so - found (/usr/local/lib/liblapack.so)
===> Returning to build of cp2k-9.1.0
===> cp2k-9.1.0 depends on shared library: libint.so - not found
===> Installing existing package /packages/All/libint-1.2.1.15.pkg
[main-armv7-default-job-05] Installing libint-1.2.1.15...
[main-armv7-default-job-05] Extracting libint-1.2.1.15: .......... done
===> cp2k-9.1.0 depends on shared library: libint.so - found (/usr/local/lib/libint.so)
===> Returning to build of cp2k-9.1.0
===========================================================================
=======================<phase: configure >============================
===> Configuring for cp2k-9.1.0
The OPENMP and OPENMP_MPI options require math/fftw3
to be built and installed with the OPENMP option ON
*** Error code 1
Stop.
make: stopped in /usr/ports/science/cp2k