[package - 130releng-armv7-default][math/py-ducc0] Failed for py39-ducc0-0.24.0 in build
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Date: Sat, 30 Jul 2022 10:23:39 UTC
You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.
Maintainer: yuri@FreeBSD.org
Log URL: http://ampere3.nyi.freebsd.org/data/130releng-armv7-default/83aeeda2ebb7/logs/py39-ducc0-0.24.0.log
Build URL: http://ampere3.nyi.freebsd.org/build.html?mastername=130releng-armv7-default&build=83aeeda2ebb7
Log:
=>> Building math/py-ducc0
build started at Sat Jul 30 10:21:03 UTC 2022
port directory: /usr/ports/math/py-ducc0
package name: py39-ducc0-0.24.0
building for: FreeBSD 130releng-armv7-default-job-01 13.0-RELEASE-p11 FreeBSD 13.0-RELEASE-p11 1300139 arm
maintained by: yuri@FreeBSD.org
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=======================<phase: check-sanity >============================
===> License GPLv2 accepted by the user
===========================================================================
=======================<phase: pkg-depends >============================
===> py39-ducc0-0.24.0 depends on file: /usr/local/sbin/pkg - not found
===> Installing existing package /packages/All/pkg-1.18.3.pkg
[130releng-armv7-default-job-01] Installing pkg-1.18.3...
[130releng-armv7-default-job-01] Extracting pkg-1.18.3: .......... done
===> py39-ducc0-0.24.0 depends on file: /usr/local/sbin/pkg - found
===> Returning to build of py39-ducc0-0.24.0
===========================================================================
=======================<phase: fetch-depends >============================
===========================================================================
=======================<phase: fetch >============================
===> License GPLv2 accepted by the user
===> Fetching all distfiles required by py39-ducc0-0.24.0 for building
===========================================================================
=======================<phase: checksum >============================
===> License GPLv2 accepted by the user
===> Fetching all distfiles required by py39-ducc0-0.24.0 for building
=> SHA256 Checksum OK for ducc0-0.24.0.tar.gz.
===========================================================================
=======================<phase: extract-depends>============================
===========================================================================
=======================<phase: extract >============================
===> License GPLv2 accepted by the user
===> Fetching all distfiles required by py39-ducc0-0.24.0 for building
===> Extracting for py39-ducc0-0.24.0
=> SHA256 Checksum OK for ducc0-0.24.0.tar.gz.
===========================================================================
=======================<phase: patch-depends >============================
===========================================================================
=======================<phase: patch >============================
===> Patching for py39-ducc0-0.24.0
===========================================================================
=======================<phase: build-depends >============================
===> py39-ducc0-0.24.0 depends on package: py39-pybind11>0 - not found
===> Installing existing package /packages/All/py39-pybind11-2.10.0.pkg
[130releng-armv7-default-job-01] Installing py39-pybind11-2.10.0...
[130releng-armv7-default-job-01] `-- Installing py39-setuptools-63.1.0...
[130releng-armv7-default-job-01] | `-- Installing python39-3.9.13...
[130releng-armv7-default-job-01] | | `-- Installing gettext-runtime-0.21...
[130releng-armv7-default-job-01] | | `-- Installing indexinfo-0.3.1...
[130releng-armv7-default-job-01] | | `-- Extracting indexinfo-0.3.1: .... done
[130releng-armv7-default-job-01] | | `-- Extracting gettext-runtime-0.21: .......... done
[130releng-armv7-default-job-01] | | `-- Installing libffi-3.4.2...
[130releng-armv7-default-job-01] | | `-- Extracting libffi-3.4.2: .......... done
[130releng-armv7-default-job-01] | | `-- Installing mpdecimal-2.5.1...
[130releng-armv7-default-job-01] | | `-- Extracting mpdecimal-2.5.1: .......... done
[130releng-armv7-default-job-01] | | `-- Installing readline-8.1.2...
[130releng-armv7-default-job-01] | | `-- Extracting readline-8.1.2: .......... done
[130releng-armv7-default-job-01] | `-- Extracting python39-3.9.13: .......... done
[130releng-armv7-default-job-01] `-- Extracting py39-setuptools-63.1.0: .......... done
[130releng-armv7-default-job-01] Extracting py39-pybind11-2.10.0: .......... done
=====
Message from python39-3.9.13:
<snip>
"$$comment": [
"According to :pep:`621`:",
" If the core metadata specification lists a field as \"Required\", then",
" the metadata MUST specify the field statically or list it in dynamic",
"In turn, `core metadata`_ defines:",
" The required fields are: Metadata-Version, Name, Version.",
" All the other fields are optional.",
"Since ``Metadata-Version`` is defined by the build back-end, ``name`` and",
"``version`` are the only mandatory information in ``pyproject.toml``.",
".. _core metadata: https://packaging.python.org/specifications/core-metadata/"
]
},
"then": {
"required": [
"version"
],
"$$description": [
"version should be statically defined in the ``version`` field"
]
},
"definitions": {
"author": {
"$id": "#/definitions/author",
"title": "Author or Maintainer",
"$comment": "https://www.python.org/dev/peps/pep-0621/#authors-maintainers",
"type": "object",
"properties": {
"name": {
"type": "string",
"$$description": [
"MUST be a valid email name, i.e. whatever can be put as a name, before an",
"email, in :rfc:`822`."
]
},
"email": {
"type": "string",
"format": "idn-email",
"description": "MUST be a valid email address"
}
}
},
"entry-point-group": {
"$id": "#/definitions/entry-point-group",
"title": "Entry-points",
"type": "object",
"$$description": [
"Entry-points are grouped together to indicate what sort of capabilities they",
"provide.",
"See the `packaging guides",
"<https://packaging.python.org/specifications/entry-points/>`_",
"and `setuptools docs",
"<https://setuptools.pypa.io/en/latest/userguide/entry_point.html>`_",
"for more information."
],
"propertyNames": {
"format": "python-entrypoint-name"
},
"additionalProperties": false,
"patternProperties": {
"^.+$": {
"type": "string",
"$$description": [
"Reference to a Python object. It is either in the form",
"``importable.module``, or ``importable.module:object.attr``."
],
"format": "python-entrypoint-reference",
"$comment": "https://packaging.python.org/specifications/entry-points/"
}
}
},
"dependency": {
"$id": "#/definitions/dependency",
"title": "Dependency",
"type": "string",
"description": "Project dependency specification according to PEP 508",
"format": "pep508"
}
}
}
/usr/local/lib/python3.9/site-packages/setuptools/config/pyprojecttoml.py:125: _InvalidFile: The given `pyproject.toml` file is invalid and would be ignored.
!!
############################
# Invalid `pyproject.toml` #
############################
Any configurations in `pyproject.toml` will be ignored.
Please note that future releases of setuptools will halt the build process
if an invalid file is given.
To prevent setuptools from considering `pyproject.toml` please
DO NOT include the `[project]` or `[tool.setuptools]` tables in your file.
!!
if _skip_bad_config(project_table, orig_setuptools_table, dist):
running build
running build_ext
building 'ducc0' extension
creating build
creating build/temp.freebsd-13.0-RELEASE-p11-arm-cpython-39
creating build/temp.freebsd-13.0-RELEASE-p11-arm-cpython-39/python
cc -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fPIC -DPKGNAME=ducc0 -DPKGVERSION=0.24.0 -I. -I./src/ -I/usr/local/lib/python3.9/site-packages/pybind11/include -I/usr/local/lib/python3.9/site-packages/pybind11/include -I/usr/local/include/python3.9 -c python/ducc.cc -o build/temp.freebsd-13.0-RELEASE-p11-arm-cpython-39/python/ducc.o -std=c++17 -fvisibility=hidden -g0 -O0 -pthread
In file included from python/ducc.cc:18:
In file included from ./python/nufft_pymod.cc:23:
./src/ducc0/nufft/nufft.h:586:43: warning: shift count >= width of type [-Wshift-count-overflow]
MR_assert((nu>>logsquare)<(size_t(1)<<32), "nu too large");
^ ~~
./src/ducc0/infra/error_handling.h:114:9: note: expanded from macro 'MR_assert'
if (cond); \
^~~~
./src/ducc0/nufft/nufft.h:2014:46: note: in instantiation of member function 'ducc0::detail_nufft::Params1d<double, double, double, double, double>::Params1d' requested here
Params1d<Tcalc, Tacc, Tms, Timg, Tcoord> par(coord, ms_in, ms, dirty, dirty_out,
^
./python/nufft_pymod.cc:46:3: note: in instantiation of function template specialization 'ducc0::detail_nufft::u2nu<double, double, double, double, double>' requested here
u2nu<Tgrid,Tgrid>(coord,grid,forward,epsilon,nthreads,out,verbosity,sigma_min,sigma_max);
^
./python/nufft_pymod.cc:57:14: note: in instantiation of function template specialization 'ducc0::detail_pymodule_nufft::Py2_u2nu<double, double>' requested here
return Py2_u2nu<double, double>(grid, coord, forward, epsilon, nthreads, out, verbosity, sigma_min, sigma_max);
^
In file included from python/ducc.cc:18:
In file included from ./python/nufft_pymod.cc:23:
./src/ducc0/nufft/nufft.h:586:43: warning: shift count >= width of type [-Wshift-count-overflow]
MR_assert((nu>>logsquare)<(size_t(1)<<32), "nu too large");
^ ~~
./src/ducc0/infra/error_handling.h:114:9: note: expanded from macro 'MR_assert'
if (cond); \
^~~~
./src/ducc0/nufft/nufft.h:2014:46: note: in instantiation of member function 'ducc0::detail_nufft::Params1d<float, float, float, float, double>::Params1d' requested here
Params1d<Tcalc, Tacc, Tms, Timg, Tcoord> par(coord, ms_in, ms, dirty, dirty_out,
^
./python/nufft_pymod.cc:46:3: note: in instantiation of function template specialization 'ducc0::detail_nufft::u2nu<float, float, float, float, double>' requested here
u2nu<Tgrid,Tgrid>(coord,grid,forward,epsilon,nthreads,out,verbosity,sigma_min,sigma_max);
^
./python/nufft_pymod.cc:59:14: note: in instantiation of function template specialization 'ducc0::detail_pymodule_nufft::Py2_u2nu<float, double>' requested here
return Py2_u2nu<float, double>(grid, coord, forward, epsilon, nthreads, out, verbosity, sigma_min, sigma_max);
^
In file included from python/ducc.cc:18:
In file included from ./python/nufft_pymod.cc:23:
./src/ducc0/nufft/nufft.h:586:43: warning: shift count >= width of type [-Wshift-count-overflow]
MR_assert((nu>>logsquare)<(size_t(1)<<32), "nu too large");
^ ~~
./src/ducc0/infra/error_handling.h:114:9: note: expanded from macro 'MR_assert'
if (cond); \
^~~~
./src/ducc0/nufft/nufft.h:2014:46: note: in instantiation of member function 'ducc0::detail_nufft::Params1d<double, double, double, double, float>::Params1d' requested here
Params1d<Tcalc, Tacc, Tms, Timg, Tcoord> par(coord, ms_in, ms, dirty, dirty_out,
^
./python/nufft_pymod.cc:46:3: note: in instantiation of function template specialization 'ducc0::detail_nufft::u2nu<double, double, double, double, float>' requested here
u2nu<Tgrid,Tgrid>(coord,grid,forward,epsilon,nthreads,out,verbosity,sigma_min,sigma_max);
^
./python/nufft_pymod.cc:64:14: note: in instantiation of function template specialization 'ducc0::detail_pymodule_nufft::Py2_u2nu<double, float>' requested here
return Py2_u2nu<double, float>(grid, coord, forward, epsilon, nthreads, out, verbosity, sigma_min, sigma_max);
^
LLVM ERROR: out of memory
PLEASE submit a bug report to https://bugs.freebsd.org/submit/ and include the crash backtrace, preprocessed source, and associated run script.
Stack dump:
0. Program arguments: /usr/bin/cc -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fPIC -DPKGNAME=ducc0 -DPKGVERSION=0.24.0 -I. -I./src/ -I/usr/local/lib/python3.9/site-packages/pybind11/include -I/usr/local/lib/python3.9/site-packages/pybind11/include -I/usr/local/include/python3.9 -c python/ducc.cc -o build/temp.freebsd-13.0-RELEASE-p11-arm-cpython-39/python/ducc.o -std=c++17 -fvisibility=hidden -g0 -O0 -pthread
1. <eof> parser at end of file
2. ./python/nufft_pymod.cc:35:53: instantiating function definition 'ducc0::detail_pymodule_nufft::Py2_u2nu<double, float>'
3. ./src/ducc0/nufft/nufft.h:2001:92: instantiating function definition 'ducc0::detail_nufft::u2nu<double, double, double, double, float>'
4. ./src/ducc0/nufft/nufft.h:1878:5: instantiating function definition 'ducc0::detail_nufft::Params3d<double, double, double, double, float>::Params3d'
5. ./src/ducc0/nufft/nufft.h:1814:10: instantiating function definition 'ducc0::detail_nufft::Params3d<double, double, double, double, float>::dirty2x'
6. ./src/ducc0/nufft/nufft.h:1705:45: instantiating function definition 'ducc0::detail_nufft::Params3d<double, double, double, double, float>::grid2x_c_helper<16>'
7. ./src/ducc0/nufft/nufft.h:1705:45: instantiating function definition 'ducc0::detail_nufft::Params3d<double, double, double, double, float>::grid2x_c_helper<15>'
8. ./src/ducc0/nufft/nufft.h:1705:45: instantiating function definition 'ducc0::detail_nufft::Params3d<double, double, double, double, float>::grid2x_c_helper<14>'
9. ./src/ducc0/nufft/nufft.h:1705:45: instantiating function definition 'ducc0::detail_nufft::Params3d<double, double, double, double, float>::grid2x_c_helper<13>'
10. /usr/include/c++/v1/functional:2370:5: instantiating function definition 'std::__1::function<void (ducc0::detail_threading::Scheduler &)>::function<(lambda at ./src/ducc0/nufft/nufft.h:1714:53), void>'
11. /usr/include/c++/v1/functional:1805:40: instantiating function definition 'std::__1::__function::__value_func<void (ducc0::detail_threading::Scheduler &)>::__value_func<(lambda at ./src/ducc0/nufft/nufft.h:1714:53), void>'
12. /usr/include/c++/v1/functional:1775:31: instantiating function definition 'std::__1::__function::__value_func<void (ducc0::detail_threading::Scheduler &)>::__value_func<(lambda at ./src/ducc0/nufft/nufft.h:1714:53), std::__1::allocator<(lambda at ./src/ducc0/nufft/nufft.h:1714:53)>>'
13. /usr/include/c++/v1/functional:1675:14: instantiating function definition 'std::__1::__function::__func<(lambda at ./src/ducc0/nufft/nufft.h:1714:53), std::__1::allocator<(lambda at ./src/ducc0/nufft/nufft.h:1714:53)>, void (ducc0::detail_threading::Scheduler &)>::__func'
14. /usr/include/c++/v1/functional:1547:14: instantiating function definition 'std::__1::__function::__alloc_func<(lambda at ./src/ducc0/nufft/nufft.h:1714:53), std::__1::allocator<(lambda at ./src/ducc0/nufft/nufft.h:1714:53)>, void (ducc0::detail_threading::Scheduler &)>::__alloc_func'
15. /usr/include/c++/v1/memory:2193:3: instantiating function definition 'std::__1::__compressed_pair<(lambda at ./src/ducc0/nufft/nufft.h:1714:53), std::__1::allocator<(lambda at ./src/ducc0/nufft/nufft.h:1714:53)>>::__compressed_pair<(lambda at ./src/ducc0/nufft/nufft.h:1714:53) &&, std::__1::allocator<(lambda at ./src/ducc0/nufft/nufft.h:1714:53)> &&>'
16. /usr/include/c++/v1/type_traits:1410:8: instantiating class definition 'std::__1::__uncvref<const std::__1::tuple<(lambda at ./src/ducc0/nufft/nufft.h:1714:53) &&> &>'
#0 0x0317d090 (/usr/bin/cc+0x317d090)
#1 0x0317b11c (/usr/bin/cc+0x317b11c)
#2 0x0312236c (/usr/bin/cc+0x312236c)
#3 0x443ea040 (/lib/libthr.so.3+0x27040)
cc: error: clang frontend command failed due to signal (use -v to see invocation)
FreeBSD clang version 11.0.1 (git@github.com:llvm/llvm-project.git llvmorg-11.0.1-0-g43ff75f2c3fe)
Target: armv7-unknown-freebsd13.0-gnueabihf
Thread model: posix
InstalledDir: /usr/bin
cc: note: diagnostic msg:
********************
PLEASE ATTACH THE FOLLOWING FILES TO THE BUG REPORT:
Preprocessed source(s) and associated run script(s) are located at:
cc: note: diagnostic msg: /tmp/ducc-d3af0f.cpp
cc: note: diagnostic msg: /tmp/ducc-d3af0f.sh
cc: note: diagnostic msg:
********************
error: command '/usr/bin/cc' failed with exit code 254
*** Error code 1
Stop.
make: stopped in /usr/ports/math/py-ducc0