From nobody Tue Jul 19 23:45:26 2022 X-Original-To: pkg-fallout@mlmmj.nyi.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2610:1c1:1:606c::19:1]) by mlmmj.nyi.freebsd.org (Postfix) with ESMTP id 4Lnb6t3Ccbz46tFR for ; Tue, 19 Jul 2022 23:45:26 +0000 (UTC) (envelope-from pkg-fallout@FreeBSD.org) Received: from mxrelay.nyi.freebsd.org (mxrelay.nyi.freebsd.org [IPv6:2610:1c1:1:606c::19:3]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (4096 bits) server-digest SHA256 client-signature RSA-PSS (4096 bits) client-digest SHA256) (Client CN "mxrelay.nyi.freebsd.org", Issuer "R3" (verified OK)) by mx1.freebsd.org (Postfix) with ESMTPS id 4Lnb6t1Y2Fz3TFN; Tue, 19 Jul 2022 23:45:26 +0000 (UTC) (envelope-from pkg-fallout@FreeBSD.org) Received: from beefy5.nyi.freebsd.org (beefy5.nyi.freebsd.org [IPv6:2610:1c1:1:6080::16:14]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (4096 bits) server-digest SHA256) (Client did not present a certificate) by mxrelay.nyi.freebsd.org (Postfix) with ESMTPS id 4Lnb6t0bgwzd1l; Tue, 19 Jul 2022 23:45:26 +0000 (UTC) (envelope-from pkg-fallout@FreeBSD.org) Received: from beefy5.nyi.freebsd.org (localhost [127.0.0.1]) by beefy5.nyi.freebsd.org (8.16.1/8.16.1) with ESMTP id 26JNjQDb039476; Tue, 19 Jul 2022 23:45:26 GMT (envelope-from pkg-fallout@FreeBSD.org) Received: (from root@localhost) by beefy5.nyi.freebsd.org (8.16.1/8.16.1/Submit) id 26JNjQj2039475; Tue, 19 Jul 2022 23:45:26 GMT (envelope-from pkg-fallout@FreeBSD.org) Date: Tue, 19 Jul 2022 23:45:26 GMT From: pkg-fallout@FreeBSD.org Message-Id: <202207192345.26JNjQj2039475@beefy5.nyi.freebsd.org> To: sunpoet@FreeBSD.org Subject: [package - 123i386-default][science/pnetcdf] Failed for pnetcdf-1.12.3 in configure Cc: pkg-fallout@FreeBSD.org ARC-Message-Signature: i=1; a=rsa-sha256; c=relaxed/relaxed; d=freebsd.org; s=dkim; t=1658274326; h=from:from:reply-to:subject:subject:date:date:message-id:message-id: to:to:cc:cc; bh=T0Nmb1h+ThEgqgHOgM8WGD2blZnAOcWZK1ozXzzqROQ=; b=IKS1LzOeyo4sOFS8C0riuEF+lWg+mQxrkk2TfVPOuJc7mvwBFKwRF3u+fa+GqTvEGGTIg2 BifAKu7D3kWozVcYbSGFvZHZxX8oyqn7Ggm89BhPhuk0ho7BON6E5Rmg89XwsUDuX9M6u+ EC6+rFL8liltj1yumx8lerlmH1IwEhXrZpjj12WTaFR0y4W6++z5e3Mr7ZKyGSMPzRIMI+ 3dTuhlk+0LPq7RwLc5+3T8ET1CFZLs/YiJH2Pd8yXm1nQG1N1h0nyl78SmL2vVmM5JKTe/ 60lLIcRZwBi17l2cKcZHVhnQm9b2Cnz36ccCoWtxy5oXxx/kxhaosvIjrUvm6A== ARC-Seal: i=1; s=dkim; d=freebsd.org; t=1658274326; a=rsa-sha256; cv=none; b=wHW0ME3pEYkI0zkrq3f/Jq38z49MZcUkb8edDzQbPSopLUzTKu8JupIekcKYpTv0be9uqX lZMMwIeJx+FWA6gcGi59VY70b8vG6qJ3ApYKZC0HV9iiKCsLyxTiMm4yckdaegqeFhCIaH phXGK2D1hsh5FJO7Lg+BU/TYE9nwCRhjdHl1OoPSUvlv1Wf5y3Hec6Q7L5XqmlxuzFT5Bi ccB0ajX2qC10J0o851DqhdWU6Z/RtLAv21nImecsHXhvC9HclAZyYoirLvoEvKMLLOotje /PWqWkjMiJhCQgdjy1G5DzJ9IoKd2POlrqaorN1qMlmchTbTMop2nAaGGQuPDA== ARC-Authentication-Results: i=1; mx1.freebsd.org; none X-ThisMailContainsUnwantedMimeParts: N List-Id: Fallout logs from package building List-Archive: https://lists.freebsd.org/archives/freebsd-pkg-fallout List-Help: List-Post: List-Subscribe: List-Unsubscribe: Sender: owner-freebsd-pkg-fallout@freebsd.org You are receiving this mail as a port that you maintain is failing to build on the FreeBSD package build server. Please investigate the failure and submit a PR to fix build. Maintainer: sunpoet@FreeBSD.org Log URL: http://beefy5.nyi.freebsd.org/data/123i386-default/a51002eeb3d0/logs/pnetcdf-1.12.3.log Build URL: http://beefy5.nyi.freebsd.org/build.html?mastername=123i386-default&build=a51002eeb3d0 Log: =>> Building science/pnetcdf build started at Tue Jul 19 23:44:52 UTC 2022 port directory: /usr/ports/science/pnetcdf package name: pnetcdf-1.12.3 building for: FreeBSD 123i386-default-job-09 12.3-RELEASE-p5 FreeBSD 12.3-RELEASE-p5 i386 maintained by: sunpoet@FreeBSD.org Makefile ident: Poudriere version: 3.2.8-21-g883afb07 Host OSVERSION: 1400063 Jail OSVERSION: 1203000 Job Id: 09 ---Begin Environment--- SHELL=/bin/csh UNAME_p=i386 UNAME_m=i386 OSVERSION=1203000 UNAME_v=FreeBSD 12.3-RELEASE-p5 UNAME_r=12.3-RELEASE-p5 BLOCKSIZE=K MAIL=/var/mail/root STATUS=1 HOME=/root PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin LOCALBASE=/usr/local USER=root LIBEXECPREFIX=/usr/local/libexec/poudriere POUDRIERE_VERSION=3.2.8-21-g883afb07 MASTERMNT=/usr/local/poudriere/data/.m/123i386-default/ref POUDRIERE_BUILD_TYPE=bulk PACKAGE_BUILDING=yes SAVED_TERM= PWD=/usr/local/poudriere/data/.m/123i386-default/ref/.p/pool P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS MASTERNAME=123i386-default SCRIPTPREFIX=/usr/local/share/poudriere OLDPWD=/usr/local/poudriere/data/.m/123i386-default/ref/.p SCRIPTPATH=/usr/local/share/poudriere/bulk.sh POUDRIEREPATH=/usr/local/bin/poudriere ---End Environment--- ---Begin Poudriere Port Flags/Env--- PORT_FLAGS= PKGENV= FLAVOR= DEPENDS_ARGS= MAKE_ARGS= ---End Poudriere Port Flags/Env--- ---Begin OPTIONS List--- ===> The following configuration options are available for pnetcdf-1.12.3: ====> MPI (Message Passing Interface) support: you have to select exactly one of them OPENMPI=on: Parallel processing support via Open MPI MPICH=off: Parallel processing support via MPICH 3 ===> Use 'make config' to modify these settings ---End OPTIONS List--- --MAINTAINER-- sunpoet@FreeBSD.org --End MAINTAINER-- --CONFIGURE_ARGS-- --with-mpi=/usr/local/mpi/openmpi ac_cv_fc_compiler_nag=no --prefix=/usr/local ${_LATE_CONFIGURE_ARGS} --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- F77="gfortran11" FC="gfortran11" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc11" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc11 -fallow-argument-mismatch" MAKE=gmake ac_cv_path_PERL=/usr/local/bin/perl ac_cv_path_PERL_PATH=/usr/local/bin/perl PERL_USE_UNSAFE_INC=1 XDG_DATA_HOME=/wrkdirs/usr/ports/science/pnetcdf/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/pnetcdf/work XDG_CACHE_HOME=/wrkdirs/usr/ports/science/pnetcdf/work/.cache HOME=/wrkdirs/usr/ports/science/pnetcdf/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/pnetcdf/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/science/pnetcdf/work/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/libdata/pkgconfig SHELL=/bin/sh CONFIG_SHELL=/bin/sh ADDR2LINE="/usr/local/bin/addr2line" AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" OBJCOPY="/usr/local/bin/objcopy" OBJDUMP ="/usr/local/bin/objdump" RANLIB="/usr/local/bin/ranlib" READELF="/usr/local/bin/readelf" SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" CONFIG_SITE=/usr/ports/Templates/config.site lt_cv_sys_max_cmd_len=524288 --End CONFIGURE_ENV-- --MAKE_ENV-- F77="gfortran11" FC="gfortran11" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc11" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc11 -fallow-argument-mismatch" PERL_USE_UNSAFE_INC=1 XDG_DATA_HOME=/wrkdirs/usr/ports/science/pnetcdf/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/science/pnetcdf/work XDG_CACHE_HOME=/wrkdirs/usr/ports/science/pnetcdf/work/.cache HOME=/wrkdirs/usr/ports/science/pnetcdf/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/science/pnetcdf/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/science/pnetcdf/work/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/libdata/pkgconfig NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES ADDR2LINE="/usr/local/bin/addr2line" AR="/usr/local/bin/ar" AS="/usr/local/bin/as" CPPFILT="/usr/local/bin/c++filt" GPROF="/usr/local/bin/gprof" LD="/usr/local/bin/ld" NM="/usr/local/bin/nm" OBJCOPY="/usr/local/bin/objcopy" OBJDUMP="/usr/local/bin/objdump" RANLIB="/usr/local/bin /ranlib" READELF="/usr/local/bin/readelf" SIZE="/usr/local/bin/size" STRINGS="/usr/local/bin/strings" PREFIX=/usr/local LOCALBASE=/usr/local CC="cc" CFLAGS="-O2 -pipe -fPIC -fstack-protector-strong -fno-strict-aliasing " CPP="cpp" CPPFLAGS="" LDFLAGS=" -Wl,-rpath=/usr/local/lib/gcc11 -L/usr/local/lib/gcc11 -B/usr/local/bin -fstack-protector-strong " LIBS="" CXX="c++" CXXFLAGS="-O2 -pipe -fPIC -fstack-protector-strong -fno-strict-aliasing " MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" --End MAKE_ENV-- --PLIST_SUB-- OSREL=12.3 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib PERL_VERSION=5.32.1 PERL_VER=5.32 PERL5_MAN1=lib/perl5/site_perl/man/man1 PERL5_MAN3=lib/perl5/site_perl/man/man3 SITE_PERL=lib/perl5/site_perl SITE_ARCH=lib/perl5/site_perl/mach/5.32 DOCSDIR="share/doc/pnetcdf" EXAMPLESDIR="share/examples/pnetcdf" DATADIR="share/pnetcdf" WWWDIR="www/pnetcdf" ETCDIR="etc/pnetcdf" --End PLIST_SUB-- --SUB_LIST-- PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/pnetcdf DOCSDIR=/usr/local/share/doc/pnetcdf EXAMPLESDIR=/usr/local/share/examples/pnetcdf WWWDIR=/usr/local/www/pnetcdf ETCDIR=/usr/local/etc/pnetcdf --End SUB_LIST-- ---Begin make.conf--- USE_PACKAGE_DEPENDS=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles PACKAGE_BUILDING=yes PACKAGE_BUILDING_FLAVORS=yes MACHINE=i386 MACHINE_ARCH=i386 ARCH=${MACHINE_ARCH} #### /usr/local/etc/poudriere.d/make.conf #### # XXX: We really need this but cannot use it while 'make checksum' does not # try the next mirror on checksum failure. It currently retries the same # failed mirror and then fails rather then trying another. It *does* # try the next if the size is mismatched though. #MASTER_SITE_FREEBSD=yes # Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs MAKE_JOBS_NUMBER=2 #### /usr/ports/Mk/Scripts/ports_env.sh #### _CCVERSION_921dbbb2=FreeBSD clang version 10.0.1 (git@github.com:llvm/llvm-project.git llvmorg-10.0.1-0-gef32c611aa2) Target: i386-unknown-freebsd12.3 Thread model: posix InstalledDir: /usr/bin _ALTCCVERSION_921dbbb2=none _CXXINTERNAL_acaad9ca=FreeBSD clang version 10.0.1 (git@github.com:llvm/llvm-project.git llvmorg-10.0.1-0-gef32c611aa2) Target: i386-unknown-freebsd12.3 Thread model: posix InstalledDir: /usr/bin "/usr/bin/ld" "--eh-frame-hdr" "-dynamic-linker" "/libexec/ld-elf.so.1" "--hash-style=both" "--enable-new-dtags" "-m" "elf_i386_fbsd" "-o" "a.out" "/usr/lib/crt1.o" "/usr/lib/crti.o" "/usr/lib/crtbegin.o" "-L/usr/lib" "/dev/null" "-lc++" "-lm" "-lgcc" "--as-needed" "-lgcc_s" "--no-as-needed" "-lc" "-lgcc" "--as-needed" "-lgcc_s" "--no-as-needed" "/usr/lib/crtend.o" "/usr/lib/crtn.o" CC_OUTPUT_921dbbb2_58173849=yes CC_OUTPUT_921dbbb2_9bdba57c=yes CC_OUTPUT_921dbbb2_6a4fe7f5=yes CC_OUTPUT_921dbbb2_6bcac02b=yes CC_OUTPUT_921dbbb2_67d20829=yes CC_OUTPUT_921dbbb2_bfa62e83=yes CC_OUTPUT_921dbbb2_f0b4d593=yes CC_OUTPUT_921dbbb2_308abb44=yes CC_OUTPUT_921dbbb2_f00456e5=yes CC_OUTPUT_921dbbb2_65ad290d=yes CC_OUTPUT_921dbbb2_f2776b26=yes CC_OUTPUT_921dbbb2_b2657cc3=yes CC_OUTPUT_921dbbb2_380987f7=yes CC_OUTPUT_921dbbb2_160933ec=yes CC_OUTPUT_921dbbb2_fb62803b=yes _OBJC_CCVERSION_921dbbb2=FreeBSD clang version 10.0.1 (git@github.com:llvm/llvm-project.git llvmorg-10.0.1-0-gef32c611aa2) Target: i386-unknown-freebsd12.3 Thread model: posix InstalledDir: /usr/bin _OBJC_ALTCCVERSION_921dbbb2=none ARCH=i386 OPSYS=FreeBSD _OSRELEASE=12.3-RELEASE-p5 OSREL=12.3 OSVERSION=1203000 PYTHONBASE=/usr/local CONFIGURE_MAX_CMD_LEN=524288 HAVE_PORTS_ENV=1 #### Misc Poudriere #### GID=0 UID=0 DISABLE_MAKE_JOBS=poudriere ---End make.conf--- --Resource limits-- cpu time (seconds, -t) unlimited file size (512-blocks, -f) unlimited data seg size (kbytes, -d) 524288 stack size (kbytes, -s) 65536 core file size (512-blocks, -c) unlimited max memory size (kbytes, -m) unlimited locked memory (kbytes, -l) unlimited max user processes (-u) 89999 open files (-n) 1024 virtual mem size (kbytes, -v) unlimited swap limit (kbytes, -w) unlimited socket buffer size (bytes, -b) unlimited pseudo-terminals (-p) unlimited kqueues (-k) unlimited umtx shared locks (-o) unlimited --End resource limits-- =================================================== =========================================================================== =================================================== ===> pnetcdf-1.12.3 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-1.18.3.pkg [123i386-default-job-09] Installing pkg-1.18.3... [123i386-default-job-09] Extracting pkg-1.18.3: .......... done ===> pnetcdf-1.12.3 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of pnetcdf-1.12.3 =========================================================================== =================================================== =========================================================================== =================================================== => pnetcdf-1.12.3.tar.gz doesn't seem to exist in /portdistfiles/. => Attempting to fetch https://parallel-netcdf.github.io/Release/pnetcdf-1.12.3.tar.gz pnetcdf-1.12.3.tar.gz 2258 kB 26 MBps 00s ===> Fetching all distfiles required by pnetcdf-1.12.3 for building =========================================================================== =================================================== ===> Fetching all distfiles required by pnetcdf-1.12.3 for building => SHA256 Checksum OK for pnetcdf-1.12.3.tar.gz. =========================================================================== =================================================== =========================================================================== =================================================== ===> Fetching all distfiles required by pnetcdf-1.12.3 for building ===> Extracting for pnetcdf-1.12.3 => SHA256 Checksum OK for pnetcdf-1.12.3.tar.gz. =========================================================================== =================================================== =========================================================================== =================================================== ===> Patching for pnetcdf-1.12.3 ===> Applying FreeBSD patches for pnetcdf-1.12.3 from /usr/ports/science/pnetcdf/files =========================================================================== =================================================== ===> pnetcdf-1.12.3 depends on executable: gfortran11 - not found ===> Installing existing package /packages/All/gcc11-11.3.0.pkg [123i386-default-job-09] Installing gcc11-11.3.0... [123i386-default-job-09] `-- Installing binutils-2.37_2,1... [123i386-default-job-09] | `-- Installing gettext-runtime-0.21... [123i386-default-job-09] | | `-- Installing indexinfo-0.3.1... [123i386-default-job-09] | | `-- Extracting indexinfo-0.3.1: .... done [123i386-default-job-09] | `-- Extracting gettext-runtime-0.21: .......... done [123i386-default-job-09] `-- Extracting binutils-2.37_2,1: .......... done [123i386-default-job-09] `-- Installing gmp-6.2.1... [123i386-default-job-09] `-- Extracting gmp-6.2.1: .......... done checking for a sed that does not truncate output... (cached) /usr/bin/sed checking for sed handling option -i ... /usr/bin/sed -i '' checking for mpicc... /usr/local/mpi/openmpi/bin/mpicc checking for gcc... /usr/local/mpi/openmpi/bin/mpicc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether /usr/local/mpi/openmpi/bin/mpicc accepts -g... yes checking for /usr/local/mpi/openmpi/bin/mpicc option to accept ISO C89... none needed checking whether /usr/local/mpi/openmpi/bin/mpicc understands -c and -o together... yes checking whether gmake supports the include directive... yes (GNU style) checking dependency style of /usr/local/mpi/openmpi/bin/mpicc... gcc3 checking for C compiler vendor... clang checking base compiler command in MPICC wrapper... cc checking for cc... /usr/bin/cc checking how to run the C preprocessor... cpp checking for special C compiler options needed for large files... no checking for _FILE_OFFSET_BITS value needed for large files... no checking for MPI_Comm_rank... yes checking for MPI_File_open... yes checking MPI Standard version implemented... 3.1 checking whether MPICH_VERSION is declared... no checking whether MPICH2_VERSION is declared... no checking whether OMPI_MAJOR_VERSION is declared... yes checking whether MVAPICH2_VERSION is declared... no checking MPI vendor... unknown checking whether /usr/local/mpi/openmpi/bin/mpicc is a wrapper of a C++ compiler... no checking build system type... i386-portbld-freebsd12.3 checking host system type... i386-portbld-freebsd12.3 checking the archiver (/usr/local/bin/ar) interface... ar checking how to print strings... printf checking for a sed that does not truncate output... (cached) /usr/bin/sed checking for fgrep... (cached) /usr/bin/fgrep checking for ld used by /usr/local/mpi/openmpi/bin/mpicc... /usr/local/bin/ld checking if the linker (/usr/local/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/local/bin/nm checking the name lister (/usr/local/bin/nm) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... (cached) 524288 checking how to convert i386-portbld-freebsd12.3 file names to i386-portbld-freebsd12.3 format... func_convert_file_noop checking how to convert i386-portbld-freebsd12.3 file names to toolchain format... func_convert_file_noop checking for /usr/local/bin/ld option to reload object files... -r checking for objdump... /usr/local/bin/objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... /usr/local/bin/ranlib checking command to parse /usr/local/bin/nm output from /usr/local/mpi/openmpi/bin/mpicc object... ok checking for sysroot... no checking for a working dd... /bin/dd checking how to truncate binary pipes... /bin/dd bs=4096 count=1 checking for mt... mt checking if mt is a manifest tool... no checking for ANSI C header files... (cached) yes checking for sys/types.h... (cached) yes checking for sys/stat.h... (cached) yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for memory.h... (cached) yes checking for strings.h... (cached) yes checking for inttypes.h... (cached) yes checking for stdint.h... (cached) yes checking for unistd.h... (cached) yes checking for dlfcn.h... (cached) yes checking for objdir... .libs checking if /usr/local/mpi/openmpi/bin/mpicc supports -fno-rtti -fno-exceptions... yes checking for /usr/local/mpi/openmpi/bin/mpicc option to produce PIC... -fPIC -DPIC checking if /usr/local/mpi/openmpi/bin/mpicc PIC flag -fPIC -DPIC works... yes checking if /usr/local/mpi/openmpi/bin/mpicc static flag -static works... no checking if /usr/local/mpi/openmpi/bin/mpicc supports -c -o file.o... yes checking if /usr/local/mpi/openmpi/bin/mpicc supports -c -o file.o... (cached) yes checking whether the /usr/local/mpi/openmpi/bin/mpicc linker (/usr/local/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... freebsd12.3 ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... no checking whether to build static libraries... yes checking for mpicxx... /usr/local/mpi/openmpi/bin/mpicxx checking whether we are using the GNU C++ compiler... yes checking whether /usr/local/mpi/openmpi/bin/mpicxx accepts -g... yes checking dependency style of /usr/local/mpi/openmpi/bin/mpicxx... gcc3 checking how to run the C++ preprocessor... /usr/local/mpi/openmpi/bin/mpicxx -E checking for ld used by /usr/local/mpi/openmpi/bin/mpicxx... /usr/local/bin/ld checking if the linker (/usr/local/bin/ld) is GNU ld... yes checking whether the /usr/local/mpi/openmpi/bin/mpicxx linker (/usr/local/bin/ld) supports shared libraries... yes checking for /usr/local/mpi/openmpi/bin/mpicxx option to produce PIC... -fPIC -DPIC checking if /usr/local/mpi/openmpi/bin/mpicxx PIC flag -fPIC -DPIC works... yes checking if /usr/local/mpi/openmpi/bin/mpicxx static flag -static works... no checking if /usr/local/mpi/openmpi/bin/mpicxx supports -c -o file.o... yes checking if /usr/local/mpi/openmpi/bin/mpicxx supports -c -o file.o... (cached) yes checking whether the /usr/local/mpi/openmpi/bin/mpicxx linker (/usr/local/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... freebsd12.3 ld.so checking how to hardcode library paths into programs... immediate checking for C++ compiler vendor... clang checking base compiler command in MPICXX wrapper... c++ checking for c++... /usr/bin/c++ checking for MPI_File_close... yes checking whether MPI C++ compiler redefines SEEK_SET ... no checking for mpif77... /usr/local/mpi/openmpi/bin/mpif77 checking for mpif90... /usr/local/mpi/openmpi/bin/mpif90 checking whether we are using the GNU Fortran 77 compiler... yes checking whether /usr/local/mpi/openmpi/bin/mpif77 accepts -g... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... no checking whether to build static libraries... yes checking for /usr/local/mpi/openmpi/bin/mpif77 option to produce PIC... -fPIC checking if /usr/local/mpi/openmpi/bin/mpif77 PIC flag -fPIC works... yes checking if /usr/local/mpi/openmpi/bin/mpif77 static flag -static works... no checking if /usr/local/mpi/openmpi/bin/mpif77 supports -c -o file.o... yes checking if /usr/local/mpi/openmpi/bin/mpif77 supports -c -o file.o... (cached) yes checking whether the /usr/local/mpi/openmpi/bin/mpif77 linker (/usr/local/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... freebsd12.3 ld.so checking how to hardcode library paths into programs... immediate checking how to get verbose linking output from /usr/local/mpi/openmpi/bin/mpif77... -v checking for Fortran 77 libraries of /usr/local/mpi/openmpi/bin/mpif77... -L/usr/local/lib/gcc11 -L/usr/local/mpi/openmpi/lib -L/usr/local/bin -L/usr/local/lib/gcc11/gcc/i386-portbld-freebsd12.3/11.3.0 -L/usr/local/lib/gcc11/gcc/i386-portbld-freebsd12.3/11.3.0/../../../../../i386-portbld-freebsd12.3/lib -L/usr/local/lib/gcc11/gcc/i386-portbld-freebsd12.3/11.3.0/../../.. -lmpi_usempi -lmpi_mpifh -lmpi -lgfortran -lm -lssp_nonshared -lquadmath -lpthread checking whether /usr/local/mpi/openmpi/bin/mpif77 is a valid MPI compiler... yes checking whether we are using the GNU Fortran compiler... yes checking whether /usr/local/mpi/openmpi/bin/mpif90 accepts -g... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... no checking whether to build static libraries... yes checking for /usr/local/mpi/openmpi/bin/mpif90 option to produce PIC... -fPIC checking if /usr/local/mpi/openmpi/bin/mpif90 PIC flag -fPIC works... yes checking if /usr/local/mpi/openmpi/bin/mpif90 static flag -static works... no checking if /usr/local/mpi/openmpi/bin/mpif90 supports -c -o file.o... yes checking if /usr/local/mpi/openmpi/bin/mpif90 supports -c -o file.o... (cached) yes checking whether the /usr/local/mpi/openmpi/bin/mpif90 linker (/usr/local/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... freebsd12.3 ld.so checking how to hardcode library paths into programs... immediate checking how to get verbose linking output from /usr/local/mpi/openmpi/bin/mpif90... -v checking for Fortran libraries of /usr/local/mpi/openmpi/bin/mpif90... -L/usr/local/lib/gcc11 -L/usr/local/mpi/openmpi/lib -L/usr/local/bin -L/usr/local/lib/gcc11/gcc/i386-portbld-freebsd12.3/11.3.0 -L/usr/local/lib/gcc11/gcc/i386-portbld-freebsd12.3/11.3.0/../../../../../i386-portbld-freebsd12.3/lib -L/usr/local/lib/gcc11/gcc/i386-portbld-freebsd12.3/11.3.0/../../.. -lmpi_usempi -lmpi_mpifh -lmpi -lgfortran -lm -lssp_nonshared -lquadmath -lpthread checking whether mpi.mod is available... yes checking whether /usr/local/mpi/openmpi/bin/mpif90 is a valid MPI compiler... yes checking for Fortran flag needed to accept free-form source... -ffree-form checking for Fortran flag to compile preprocessed .F files... none checking for Fortran flag to compile preprocessed .F90 files... none checking for Fortran flag to compile preprocessed .F files... (cached) none checking how to define symbols for preprocessed Fortran... -D checking for Fortran flag to compile .f files... none checking for Fortran flag to compile .F files... none checking for Fortran flag to compile .f90 files... none checking for Fortran flag to compile .F90 files... none checking for Fortran compiler vendor... gnu checking base compiler command in MPIF90 wrapper... gfortran11 checking for gfortran11... /usr/local/bin/gfortran11 checking for Fortran flag needed to accept fixed-form source... -ffixed-form checking for dummy main to link with Fortran libraries... none checking for Fortran name-mangling scheme... lower case, underscore, no extra underscore checking for C-equivalent to Fortran routine "SUB_A"... sub_a_ checking Fortran compiler treating constant modifier... 8 checking Fortran 90 module extension... mod checking Fortran 90 module inclusion flag... -I checking Fortran 90 module extension... (cached) mod checking whether Fortran 90 compiler capitalizes .mod filenames... no checking for m4... m4 checking m4 additional flags... none needed checking for stdbool.h that conforms to C99... (cached) yes checking for _Bool... (cached) yes checking for inline... inline checking for IEEE floating point format... yes checking whether strdup is declared... (cached) yes checking for strdup... (cached) yes checking whether strerror is declared... yes checking for strerror... (cached) yes checking whether access is declared... yes checking for access... yes checking whether truncate is declared... yes checking for truncate... (cached) yes checking whether unlink is declared... (cached) yes checking for unlink... (cached) yes checking whether strcasecmp is declared... yes checking for strcasecmp... (cached) yes checking for search.h... (cached) yes checking whether tsearch is declared... yes checking for tsearch... (cached) yes checking whether tdelete is declared... yes checking for tdelete... yes checking size of MPI_Offset... 4 configure: error: ----------------------------------------------------------------------- Building of PnetCDF cannot continue due to the size of MPI_Offset being less than 8 bytes. Please use an MPI library that supports large files. Abort. ----------------------------------------------------------------------- ===> Script "configure" failed unexpectedly. Please report the problem to sunpoet@FreeBSD.org [maintainer] and attach the "/wrkdirs/usr/ports/science/pnetcdf/work/pnetcdf-1.12.3/config.log" including the output of the failure of your make command. Also, it might be a good idea to provide an overview of all packages installed on your system (e.g. a /usr/local/sbin/pkg-static info -g -Ea). *** Error code 1 Stop. make: stopped in /usr/ports/science/pnetcdf