[package - 130arm64-default][biology/molden] Failed for molden-6.7,1 in build

From: <pkg-fallout_at_FreeBSD.org>
Date: Sun, 16 Jan 2022 07:22:21 GMT
You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer:     jmd_at_FreeBSD.org
Log URL:        http://ampere1.nyi.freebsd.org/data/130arm64-default/a11d0355153c/logs/molden-6.7,1.log
Build URL:      http://ampere1.nyi.freebsd.org/build.html?mastername=130arm64-default&build=a11d0355153c
Log:

=>> Building biology/molden
build started at Sun Jan 16 07:20:01 UTC 2022
port directory: /usr/ports/biology/molden
package name: molden-6.7,1
building for: FreeBSD 130arm64-default-job-07 13.0-RELEASE-p5 FreeBSD 13.0-RELEASE-p5 arm64
maintained by: jmd_at_FreeBSD.org
Makefile ident: 
Poudriere version: 3.2.8-21-g883afb07
Host OSVERSION: 1400008
Jail OSVERSION: 1300139
Job Id: 07

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---Begin OPTIONS List---
===> The following configuration options are available for molden-6.7,1:
     DATA=on: Install data files
     DOCS=on: Build and/or install documentation
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
jmd_at_FreeBSD.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

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--PLIST_SUB--
PORTDOCS="" OSREL=13.0 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/molden"  EXAMPLESDIR="share/examples/molden"  DATADIR="share/molden"  WWWDIR="www/molden"  ETCDIR="etc/molden"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/molden DOCSDIR=/usr/local/share/doc/molden EXAMPLESDIR=/usr/local/share/examples/molden  WWWDIR=/usr/local/www/molden ETCDIR=/usr/local/etc/molden
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=======================<phase: check-sanity   >============================
===>  License Molden accepted by the user
===========================================================================
=======================<phase: pkg-depends    >============================
===>   molden-6.7,1 depends on file: /usr/local/sbin/pkg - not found
===>   Installing existing package /packages/All/pkg-1.17.5.pkg
[130arm64-default-job-07] Installing pkg-1.17.5...
[130arm64-default-job-07] Extracting pkg-1.17.5: .......... done
===>   molden-6.7,1 depends on file: /usr/local/sbin/pkg - found
===>   Returning to build of molden-6.7,1
===========================================================================
=======================<phase: fetch-depends  >============================
===========================================================================
=======================<phase: fetch          >============================
===>  License Molden accepted by the user
=> molden6.7.tar.gz doesn't seem to exist in /portdistfiles/.
=> Attempting to fetch ftp://ftp.cmbi.umcn.nl/pub/molgraph/molden/molden6.7.tar.gz
molden6.7.tar.gz                                        11 MB 9106 kBps    01s
===> Fetching all distfiles required by molden-6.7,1 for building
===========================================================================
=======================<phase: checksum       >============================
===>  License Molden accepted by the user
===> Fetching all distfiles required by molden-6.7,1 for building
=> SHA256 Checksum OK for molden6.7.tar.gz.
===========================================================================
=======================<phase: extract-depends>============================
===========================================================================
=======================<phase: extract        >============================
===>  License Molden accepted by the user
===> Fetching all distfiles required by molden-6.7,1 for building
===>  Extracting for molden-6.7,1
=> SHA256 Checksum OK for molden6.7.tar.gz.
===========================================================================
=======================<phase: patch-depends  >============================
===========================================================================
=======================<phase: patch          >============================
===>  Patching for molden-6.7,1
===========================================================================
=======================<phase: build-depends  >============================
===>   molden-6.7,1 depends on executable: makedepend - not found
===>   Installing existing package /packages/All/makedepend-1.0.6,1.pkg
[130arm64-default-job-07] Installing makedepend-1.0.6,1...
[130arm64-default-job-07] Extracting makedepend-1.0.6,1: ..... done
===>   molden-6.7,1 depends on executable: makedepend - found
===>   Returning to build of molden-6.7,1
===>   molden-6.7,1 depends on executable: gfortran10 - not found
===>   Installing existing package /packages/All/gcc10-10.3.0.pkg
[130arm64-default-job-07] Installing gcc10-10.3.0...
[130arm64-default-job-07] `-- Installing binutils-2.37_2,1...
[130arm64-default-job-07] |   `-- Installing gettext-runtime-0.21...
[130arm64-default-job-07] |   | `-- Installing indexinfo-0.3.1...
[130arm64-default-job-07] |   | `-- Extracting indexinfo-0.3.1: .... done
<snip>
   filop_(&SEVENTYSEVEN,&ONE,&ZERO,&ZERO,&ierr);
   ^
src/xwin.c:87416:2: warning: implicit declaration of function 'getmod_' is invalid in C99 [-Wimplicit-function-declaration]
        getmod_(&igtmo,&ZERO,
        ^
src/xwin.c:87450:5: warning: implicit declaration of function 'ispnd_' is invalid in C99 [-Wimplicit-function-declaration]
           ispnd_(&irs,&i1,&irng,&ONE,&ONE,
           ^
src/xwin.c:87476:2: warning: implicit declaration of function 'calgad_' is invalid in C99 [-Wimplicit-function-declaration]
        calgad_(&iasel,&ZERO,&istat,
        ^
src/xwin.c:87488:2: warning: implicit declaration of function 'wrmod_' is invalid in C99 [-Wimplicit-function-declaration]
        wrmod_(&SEVENTYSEVEN,
        ^
src/xwin.c:87519:4: warning: implicit declaration of function 'filclo_' is invalid in C99 [-Wimplicit-function-declaration]
   filclo_(&SEVENTYSEVEN);
   ^
src/xwin.c:87681:2: warning: implicit declaration of function 'getmod_' is invalid in C99 [-Wimplicit-function-declaration]
        getmod_(&igtmo,&iadd,
        ^
src/xwin.c:87723:5: warning: implicit declaration of function 'ispnd_' is invalid in C99 [-Wimplicit-function-declaration]
           ispnd_(&irs,&i1,&irng,&ONE,&ONE,
           ^
src/xwin.c:87750:2: warning: implicit declaration of function 'calgad_' is invalid in C99 [-Wimplicit-function-declaration]
        calgad_(&iasel,&ZERO,&istat,
        ^
src/xwin.c:87765:2: warning: implicit declaration of function 'dotyd_' is invalid in C99 [-Wimplicit-function-declaration]
        dotyd_(&icel,
        ^
src/xwin.c:87833:2: warning: implicit declaration of function 'gettnd_' is invalid in C99 [-Wimplicit-function-declaration]
        gettnd_(&igttnk,&ZERO,&ipdbon,&iffset,&iheat,&heat,
        ^
src/xwin.c:87875:5: warning: implicit declaration of function 'ispnd_' is invalid in C99 [-Wimplicit-function-declaration]
           ispnd_(&irs,&i1,&irng,&ONE,&ONE,
           ^
src/xwin.c:91637:3: warning: implicit declaration of function 'cpkeyw_' is invalid in C99 [-Wimplicit-function-declaration]
  cpkeyw_();
  ^
src/xwin.c:91638:3: warning: implicit declaration of function 'filop_' is invalid in C99 [-Wimplicit-function-declaration]
  filop_(&SEVENTYSEVEN,&ONE,&ONE,&ZERO,&ierr);
  ^
src/xwin.c:91654:3: warning: implicit declaration of function 'cubtst_' is invalid in C99 [-Wimplicit-function-declaration]
  cubtst_(&SEVENTYSEVEN,&ijag);
  ^
src/xwin.c:91665:2: warning: implicit declaration of function 'rdpld_' is invalid in C99 [-Wimplicit-function-declaration]
        rdpld_(&hlpsrf->nps1,&hlpsrf->nps2,&hlpsrf->nps3,&SEVENTYSEVEN,&istat,
        ^
src/xwin.c:91678:3: warning: implicit declaration of function 'filclo_' is invalid in C99 [-Wimplicit-function-declaration]
  filclo_(&SEVENTYSEVEN);
  ^
src/xwin.c:91706:2: warning: implicit declaration of function 'rdpld_' is invalid in C99 [-Wimplicit-function-declaration]
        rdpld_(&hlpsrf->nps1,&hlpsrf->nps2,&hlpsrf->nps3,&SEVENTYSEVEN,&istat,
        ^
src/xwin.c:91913:3: warning: implicit declaration of function 'cpkeyw_' is invalid in C99 [-Wimplicit-function-declaration]
  cpkeyw_();
  ^
src/xwin.c:91914:3: warning: implicit declaration of function 'filop_' is invalid in C99 [-Wimplicit-function-declaration]
  filop_(&SEVENTYSEVEN,&ONE,&ONE,&ZERO,&ierr);
  ^
src/xwin.c:91940:3: warning: implicit declaration of function 'cubtst_' is invalid in C99 [-Wimplicit-function-declaration]
  cubtst_(&SEVENTYSEVEN,&ijag);
  ^
src/xwin.c:91951:2: warning: implicit declaration of function 'rdpld_' is invalid in C99 [-Wimplicit-function-declaration]
        rdpld_(&hlpsrf->nps1,&hlpsrf->nps2,&hlpsrf->nps3,&SEVENTYSEVEN,&istat,
        ^
src/xwin.c:91964:3: warning: implicit declaration of function 'filclo_' is invalid in C99 [-Wimplicit-function-declaration]
  filclo_(&SEVENTYSEVEN);
  ^
src/xwin.c:91997:2: warning: implicit declaration of function 'rdpld_' is invalid in C99 [-Wimplicit-function-declaration]
        rdpld_(&hlpsrf->nps1,&hlpsrf->nps2,&hlpsrf->nps3,&SEVENTYSEVEN,&istat,
        ^
src/xwin.c:92260:3: warning: implicit declaration of function 'cpkeyw_' is invalid in C99 [-Wimplicit-function-declaration]
  cpkeyw_();
  ^
src/xwin.c:92261:3: warning: implicit declaration of function 'filop_' is invalid in C99 [-Wimplicit-function-declaration]
  filop_(&SEVENTYSEVEN,&ONE,&ONE,&ZERO,&ierr);
  ^
src/xwin.c:92287:3: warning: implicit declaration of function 'cubtst_' is invalid in C99 [-Wimplicit-function-declaration]
  cubtst_(&SEVENTYSEVEN,&ijag);
  ^
src/xwin.c:92298:2: warning: implicit declaration of function 'rdpld_' is invalid in C99 [-Wimplicit-function-declaration]
        rdpld_(&hlpsrf->nps1,&hlpsrf->nps2,&hlpsrf->nps3,&SEVENTYSEVEN,&istat,
        ^
src/xwin.c:92311:3: warning: implicit declaration of function 'filclo_' is invalid in C99 [-Wimplicit-function-declaration]
  filclo_(&SEVENTYSEVEN);
  ^
src/xwin.c:92343:2: warning: implicit declaration of function 'rdpld_' is invalid in C99 [-Wimplicit-function-declaration]
        rdpld_(&hlpsrf->nps1,&hlpsrf->nps2,&hlpsrf->nps3,&SEVENTYSEVEN,&istat,
        ^
src/xwin.c:92546:3: warning: implicit declaration of function 'cpkeyw_' is invalid in C99 [-Wimplicit-function-declaration]
  cpkeyw_();
  ^
src/xwin.c:92547:3: warning: implicit declaration of function 'filop_' is invalid in C99 [-Wimplicit-function-declaration]
  filop_(&SEVENTYSEVEN,&ONE,&ONE,&ZERO,&ierr);
  ^
src/xwin.c:92563:3: warning: implicit declaration of function 'cubtst_' is invalid in C99 [-Wimplicit-function-declaration]
  cubtst_(&SEVENTYSEVEN,&ijag);
  ^
src/xwin.c:92574:2: warning: implicit declaration of function 'rdpld_' is invalid in C99 [-Wimplicit-function-declaration]
        rdpld_(&hlpsrf->nps1,&hlpsrf->nps2,&hlpsrf->nps3,&SEVENTYSEVEN,&istat,
        ^
src/xwin.c:92587:3: warning: implicit declaration of function 'filclo_' is invalid in C99 [-Wimplicit-function-declaration]
  filclo_(&SEVENTYSEVEN);
  ^
src/xwin.c:92615:2: warning: implicit declaration of function 'rdpld_' is invalid in C99 [-Wimplicit-function-declaration]
        rdpld_(&hlpsrf->nps1,&hlpsrf->nps2,&hlpsrf->nps3,&SEVENTYSEVEN,&istat,
        ^
682 warnings generated.
gmake -C src/ambfor FC=gfortran10 LDR="gfortran10 " EXT=""
gmake[2]: Entering directory '/wrkdirs/usr/ports/biology/molden/work/molden6.7/src/ambfor'
gfortran10 -c -g -ffast-math -funroll-loops -o ambfor.o ambfor.f
gfortran10 -c -g -ffast-math -funroll-loops -O3  -c -o qvdw.o qvdw.f
cc -c -g  -Wno-implicit-function-declaration -c alloc.c -o alloc.o
gfortran10 -c -g -ffast-math -funroll-loops -O3  -c -o optimise.o optimise.f
772 warnings generated.
gmake -C src/ambfor ambmd FC=gfortran10 LDR="gfortran10 " EXT=""
gmake[2]: Entering directory '/wrkdirs/usr/ports/biology/molden/work/molden6.7/src/ambfor'
gfortran10 -c -g -ffast-math -funroll-loops -O3  -c -o md.o md.f
gfortran10 -c -g -ffast-math -funroll-loops -O3  -c -o verlet.o verlet.f
gfortran10 -c -g -ffast-math -funroll-loops -O3  -c -o lbfgs.o lbfgs.f
cc -c -g  -Wno-implicit-function-declaration -DMD -c alloc.c -o allocmd.o
gfortran10 -c -g -ffast-math -funroll-loops -O3  -c -o angle.o angle.f
gfortran10 -c -g -ffast-math -funroll-loops -O3  -c -o bond.o bond.f
gfortran10 -c -g -ffast-math -funroll-loops -O3  -c -o angle.o angle.f
gfortran10 -c -g -ffast-math -funroll-loops -O3  -c -o charge.o charge.f
gfortran10 -c -g -ffast-math -funroll-loops -O3  -c -o bond.o bond.f
gfortran10 -c -g -ffast-math -funroll-loops -O3  -c -o charge.o charge.f
gfortran10 -c -g -ffast-math -funroll-loops -O3  -c -o conn.o conn.f
gfortran10 -c -g -ffast-math -funroll-loops -O3  -c -o enegrd.o enegrd.f
gfortran10 -c -g -ffast-math -funroll-loops -O3  -c -o conn.o conn.f
gfortran10 -c -g -ffast-math -funroll-loops -O3  -c -o getinp.o getinp.f
gfortran10 -c -g -ffast-math -funroll-loops -O3  -c -o enegrd.o enegrd.f
gfortran10 -c -g -ffast-math -funroll-loops -O3  -c -o getinp.o getinp.f
gfortran10 -c -g -ffast-math -funroll-loops -O3  -c -o param.o param.f
param.f:15697:20:

15694 |       call parptr(0,coo,fdum,idum)
      |                    2
.....
15697 |       call parptr(2,fdum,fdum,iatoms)
      |                    1
Error: Rank mismatch between actual argument at (1) and actual argument at (2) (rank-1 and scalar)
param.f:15699:20:

15694 |       call parptr(0,coo,fdum,idum)
      |                    2
.....
15699 |       call parptr(4,fdum,fdum,mxnat)
      |                    1
Error: Rank mismatch between actual argument at (1) and actual argument at (2) (rank-1 and scalar)
param.f:15700:20:

15694 |       call parptr(0,coo,fdum,idum)
      |                    2
.....
15700 |       call parptr(5,fdum,fdum,iwesc)
      |                    1
Error: Rank mismatch between actual argument at (1) and actual argument at (2) (rank-1 and scalar)
gmake[2]: *** [<builtin>: param.o] Error 1
gmake[2]: Leaving directory '/wrkdirs/usr/ports/biology/molden/work/molden6.7/src/ambfor'
gmake[1]: *** [makefile:313: ambfor/ambmd] Error 2
gmake[1]: *** Waiting for unfinished jobs....
gfortran10 -c -g -ffast-math -funroll-loops -O3  -c -o param.o param.f
param.f:15697:20:

15694 |       call parptr(0,coo,fdum,idum)
      |                    2
.....
15697 |       call parptr(2,fdum,fdum,iatoms)
      |                    1
Error: Rank mismatch between actual argument at (1) and actual argument at (2) (rank-1 and scalar)
param.f:15699:20:

15694 |       call parptr(0,coo,fdum,idum)
      |                    2
.....
15699 |       call parptr(4,fdum,fdum,mxnat)
      |                    1
Error: Rank mismatch between actual argument at (1) and actual argument at (2) (rank-1 and scalar)
param.f:15700:20:

15694 |       call parptr(0,coo,fdum,idum)
      |                    2
.....
15700 |       call parptr(5,fdum,fdum,iwesc)
      |                    1
Error: Rank mismatch between actual argument at (1) and actual argument at (2) (rank-1 and scalar)
gfortran10 -c -g -ffast-math -funroll-loops -O3  -c -o tors.o tors.f
gmake[2]: *** [<builtin>: param.o] Error 1
gmake[2]: *** Waiting for unfinished jobs....
gmake[2]: Leaving directory '/wrkdirs/usr/ports/biology/molden/work/molden6.7/src/ambfor'
gmake[1]: *** [makefile:309: ambfor/ambfor] Error 2
gmake[1]: Leaving directory '/wrkdirs/usr/ports/biology/molden/work/molden6.7'
===> Compilation failed unexpectedly.
Try to set MAKE_JOBS_UNSAFE=yes and rebuild before reporting the failure to
the maintainer.
*** Error code 1

Stop.
make: stopped in /usr/ports/biology/molden
Received on Sun Jan 16 2022 - 07:22:21 UTC

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