[package - 131releng-armv7-default][biology/cytoscape] Failed for cytoscape-3.6.1 in build

From: <pkg-fallout_at_FreeBSD.org>
Date: Sat, 10 Dec 2022 11:37:04 UTC
You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer:     yuri@FreeBSD.org
Log URL:        https://pkg-status.freebsd.org/ampere3/data/131releng-armv7-default/3bfbccaa24ce/logs/cytoscape-3.6.1.log
Build URL:      https://pkg-status.freebsd.org/ampere3/build.html?mastername=131releng-armv7-default&build=3bfbccaa24ce
Log:

=>> Building biology/cytoscape
build started at Sat Dec 10 10:51:20 UTC 2022
port directory: /usr/ports/biology/cytoscape
package name: cytoscape-3.6.1
building for: FreeBSD 131releng-armv7-default-job-08 13.1-RELEASE-p5 FreeBSD 13.1-RELEASE-p5 1301000 arm
maintained by: yuri@FreeBSD.org
Makefile ident: 
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=======================<phase: check-sanity   >============================
===>  License LGPL21 accepted by the user
===========================================================================
=======================<phase: pkg-depends    >============================
===>   cytoscape-3.6.1 depends on file: /usr/local/sbin/pkg - not found
===>   Installing existing package /packages/All/pkg-1.18.4.pkg
[131releng-armv7-default-job-08] Installing pkg-1.18.4...
[131releng-armv7-default-job-08] Extracting pkg-1.18.4: .......... done
===>   cytoscape-3.6.1 depends on file: /usr/local/sbin/pkg - found
===>   Returning to build of cytoscape-3.6.1
===========================================================================
=======================<phase: fetch-depends  >============================
===========================================================================
=======================<phase: fetch          >============================
===>  License LGPL21 accepted by the user
===> Fetching all distfiles required by cytoscape-3.6.1 for building
===========================================================================
=======================<phase: checksum       >============================
===>  License LGPL21 accepted by the user
===> Fetching all distfiles required by cytoscape-3.6.1 for building
=> SHA256 Checksum OK for FreeBSD-cytoscape-3.6.1-maven-repository.tar.gz.
=> SHA256 Checksum OK for cytoscape-cytoscape-3.6.1_GH0.tar.gz.
=> SHA256 Checksum OK for cytoscape-cytoscape-parent-3.6.1_GH0.tar.gz.
=> SHA256 Checksum OK for cytoscape-cytoscape-api-3.6.1_GH0.tar.gz.
=> SHA256 Checksum OK for cytoscape-cytoscape-impl-3.6.1_GH0.tar.gz.
=> SHA256 Checksum OK for cytoscape-cytoscape-support-3.6.1_GH0.tar.gz.
=> SHA256 Checksum OK for cytoscape-cytoscape-gui-distribution-3.6.1_GH0.tar.gz.
=> SHA256 Checksum OK for cytoscape-cytoscape-app-template-3.6.1_GH0.tar.gz.
===========================================================================
=======================<phase: extract-depends>============================
===========================================================================
=======================<phase: extract        >============================
===>  License LGPL21 accepted by the user
===> Fetching all distfiles required by cytoscape-3.6.1 for building
===>  Extracting for cytoscape-3.6.1
=> SHA256 Checksum OK for FreeBSD-cytoscape-3.6.1-maven-repository.tar.gz.
=> SHA256 Checksum OK for cytoscape-cytoscape-3.6.1_GH0.tar.gz.
=> SHA256 Checksum OK for cytoscape-cytoscape-parent-3.6.1_GH0.tar.gz.
=> SHA256 Checksum OK for cytoscape-cytoscape-api-3.6.1_GH0.tar.gz.
=> SHA256 Checksum OK for cytoscape-cytoscape-impl-3.6.1_GH0.tar.gz.
=> SHA256 Checksum OK for cytoscape-cytoscape-support-3.6.1_GH0.tar.gz.
=> SHA256 Checksum OK for cytoscape-cytoscape-gui-distribution-3.6.1_GH0.tar.gz.
=> SHA256 Checksum OK for cytoscape-cytoscape-app-template-3.6.1_GH0.tar.gz.
===========================================================================
=======================<phase: patch-depends  >============================
===========================================================================
=======================<phase: patch          >============================
===>  Patching for cytoscape-3.6.1
===========================================================================
=======================<phase: build-depends  >============================
===>   cytoscape-3.6.1 depends on package: maven363>0 - not found
===>   Installing existing package /packages/All/maven363-3.6.3.pkg
<snip>
[INFO] --- maven-resources-plugin:3.1.0:testResources (default-testResources) @ task-testing-impl ---
[INFO] Not copying test resources
[INFO] 
[INFO] --- maven-compiler-plugin:3.3:testCompile (default-testCompile) @ task-testing-impl ---
[INFO] Not compiling test sources
[INFO] 
[INFO] --- maven-surefire-plugin:2.12.4:test (default-test) @ task-testing-impl ---
[INFO] Tests are skipped.
[INFO] 
[INFO] --- maven-bundle-plugin:3.0.0:bundle (default-bundle) @ task-testing-impl ---
[INFO] 
[INFO] >>> maven-source-plugin:2.4:jar (attach-sources) > generate-sources @ task-testing-impl >>>
[INFO] 
[INFO] <<< maven-source-plugin:2.4:jar (attach-sources) < generate-sources @ task-testing-impl <<<
[INFO] 
[INFO] 
[INFO] --- maven-source-plugin:2.4:jar (attach-sources) @ task-testing-impl ---
[INFO] Building jar: /wrkdirs/usr/ports/biology/cytoscape/work/cytoscape-3.6.1/support/task-testing-impl/target/task-testing-impl-3.6.1-sources.jar
[INFO] 
[INFO] --- maven-install-plugin:2.5.2:install (default-install) @ task-testing-impl ---
[INFO] Installing /wrkdirs/usr/ports/biology/cytoscape/work/cytoscape-3.6.1/support/task-testing-impl/target/task-testing-impl-3.6.1.jar to /wrkdirs/usr/ports/biology/cytoscape/work/.m2/repository/org/cytoscape/task-testing-impl/3.6.1/task-testing-impl-3.6.1.jar
[INFO] Installing /wrkdirs/usr/ports/biology/cytoscape/work/cytoscape-3.6.1/support/task-testing-impl/pom.xml to /wrkdirs/usr/ports/biology/cytoscape/work/.m2/repository/org/cytoscape/task-testing-impl/3.6.1/task-testing-impl-3.6.1.pom
[INFO] Installing /wrkdirs/usr/ports/biology/cytoscape/work/cytoscape-3.6.1/support/task-testing-impl/target/task-testing-impl-3.6.1-sources.jar to /wrkdirs/usr/ports/biology/cytoscape/work/.m2/repository/org/cytoscape/task-testing-impl/3.6.1/task-testing-impl-3.6.1-sources.jar
[INFO] 
[INFO] --- maven-bundle-plugin:3.0.0:install (default-install) @ task-testing-impl ---
[INFO] Installing org/cytoscape/task-testing-impl/3.6.1/task-testing-impl-3.6.1.jar
[INFO] Writing OBR metadata
[INFO] 
[INFO] -----------------< org.cytoscape.distribution:parent >------------------
[INFO] Building Cytoscape Desktop Application Distribution 3.6.1       [75/117]
[INFO] --------------------------------[ pom ]---------------------------------
[INFO] 
[INFO] >>> maven-source-plugin:2.4:jar (attach-sources) > generate-sources @ parent >>>
[INFO] 
[INFO] <<< maven-source-plugin:2.4:jar (attach-sources) < generate-sources @ parent <<<
[INFO] 
[INFO] 
[INFO] --- maven-source-plugin:2.4:jar (attach-sources) @ parent ---
[INFO] 
[INFO] --- maven-install-plugin:2.4:install (default-install) @ parent ---
[INFO] Installing /wrkdirs/usr/ports/biology/cytoscape/work/cytoscape-3.6.1/gui-distribution/pom.xml to /wrkdirs/usr/ports/biology/cytoscape/work/.m2/repository/org/cytoscape/distribution/parent/3.6.1/parent-3.6.1.pom
[INFO] 
[INFO] ---------------< org.cytoscape.distribution:third-party >---------------
[INFO] Building Cytoscape Third-Party Dependencies (third-party) 3.6.1 [76/117]
[INFO] -------------------------------[ bundle ]-------------------------------
[INFO] 
[INFO] --- maven-resources-plugin:3.1.0:resources (default-resources) @ third-party ---
[INFO] Using 'UTF-8' encoding to copy filtered resources.
[INFO] skip non existing resourceDirectory /wrkdirs/usr/ports/biology/cytoscape/work/cytoscape-3.6.1/gui-distribution/third-party/src/main/resources
[INFO] 
[INFO] --- maven-compiler-plugin:3.3:compile (default-compile) @ third-party ---
[INFO] No sources to compile
[INFO] 
[INFO] --- maven-resources-plugin:3.1.0:testResources (default-testResources) @ third-party ---
[INFO] Not copying test resources
[INFO] 
[INFO] --- maven-compiler-plugin:3.3:testCompile (default-testCompile) @ third-party ---
[INFO] Not compiling test sources
[INFO] 
[INFO] --- maven-surefire-plugin:2.12.4:test (default-test) @ third-party ---
[INFO] Tests are skipped.
[INFO] 
[INFO] --- maven-bundle-plugin:3.0.0:bundle (default-bundle) @ third-party ---
[INFO] ------------------------------------------------------------------------
[INFO] Reactor Summary for Cytoscape Project POM 3.6.1:
[INFO] 
[INFO] Basic Cytoscape POM Configuration .................. SUCCESS [  4.226 s]
[INFO] Cytoscape API Parent Project POM ................... SUCCESS [ 39.164 s]
[INFO] Cytoscape Documentation Taglets .................... SUCCESS [ 18.594 s]
[INFO] Cytoscape Event API (event-api) .................... SUCCESS [ 35.199 s]
[INFO] Cytoscape Model API (model-api) .................... SUCCESS [ 29.739 s]
[INFO] Cytoscape Service API (service-api) ................ SUCCESS [ 27.081 s]
[INFO] Cytoscape View Model API (viewmodel-api) ........... SUCCESS [ 27.818 s]
[INFO] Cytoscape CI API (ci-api) .......................... SUCCESS [ 23.464 s]
[INFO] Cytoscape Work API (work-api) ...................... SUCCESS [ 29.429 s]
[INFO] Cytoscape Presentation API (presentation-api) ...... SUCCESS [ 43.858 s]
[INFO] Cytoscape Application API (application-api) ........ SUCCESS [ 27.767 s]
[INFO] Cytoscape Property API (property-api) .............. SUCCESS [ 29.613 s]
[INFO] Cytoscape VizMap API (vizmap-api) .................. SUCCESS [ 26.549 s]
[INFO] Cytoscape Session API (session-api) ................ SUCCESS [ 28.758 s]
[INFO] Cytoscape Filter API (filter-api) .................. SUCCESS [ 24.617 s]
[INFO] Cytoscape IO API (io-api) .......................... SUCCESS [ 27.875 s]
[INFO] Cytoscape Core Task API (core-task-api) ............ SUCCESS [ 33.511 s]
[INFO] Cytoscape Equations API (equations-api) ............ SUCCESS [ 29.028 s]
[INFO] Cytoscape Layout API (layout-api) .................. SUCCESS [ 30.822 s]
[INFO] Cytoscape Groups API (group-api) ................... SUCCESS [ 25.001 s]
[INFO] Cytoscape Groups API (jobs-api) .................... SUCCESS [ 28.758 s]
[INFO] Cytoscape Webservice API (webservice-api) .......... SUCCESS [ 24.848 s]
[INFO] Cytoscape Data Source API (datasource-api) ......... SUCCESS [ 24.372 s]
[INFO] Cytoscape Command Executor API (command-executor-api) SUCCESS [ 26.545 s]
[INFO] Cytoscape App API (app-api) ........................ FAILURE [02:10 min]
[INFO] Cytoscape Work Swing API (work-swing-api) .......... SUCCESS [ 27.781 s]
[INFO] Cytoscape Swing Application API (swing-application-api) SUCCESS [ 30.584 s]
[INFO] Cytoscape VizMap GUI API (vizmap-gui-api) .......... SUCCESS [ 29.256 s]
[INFO] Cytoscape Swing Utility API (swing-util-api) ....... SUCCESS [ 36.311 s]
[INFO] Cytoscape Webservice Swing API (webservice-swing-api) SUCCESS [ 24.275 s]
[INFO] Cytoscape Swing App API (swing-app-api) ............ SKIPPED
[INFO] Cytoscape Util API (util-api) ...................... SUCCESS [ 22.183 s]
[INFO] Cytoscape API (api-bundle) ......................... SKIPPED
[INFO] Cytoscape Implementation Parent Project POM ........ SUCCESS [ 27.462 s]
[INFO] Cytoscape Equations Impl (equations-impl) .......... SUCCESS [ 46.513 s]
[INFO] Cytoscape Model Impl Parent (model-impl-parent) .... SKIPPED
[INFO] Cytoscape Model Impl (model-impl) .................. SKIPPED
[INFO] Cytoscape Command Executor Impl (command-executor-impl) SKIPPED
[INFO] Cytoscape Ding Impl Parent (ding-impl) ............. SUCCESS [ 25.853 s]
[INFO] Cytoscape Ding View/Presentation Impl (ding-presentation-impl) SKIPPED
[INFO] Cytoscape View Model Impl Parent (viewmodel-impl-parent) SKIPPED
[INFO] Cytoscape View Model Impl (viewmodel-impl) ......... SKIPPED
[INFO] Cytoscape Groups Impl (group-impl) ................. SKIPPED
[INFO] Cytoscape Event Impl Parent (event-impl-parent) .... SUCCESS [ 27.088 s]
[INFO] Cytoscape Event Impl (event-impl) .................. SUCCESS [ 25.690 s]
[INFO] Cytoscape Filters Impl (filter-impl) ............... SKIPPED
[INFO] Cytoscape Filters 2 Impl (filter2-impl) ............ SKIPPED
[INFO] Cytoscape IO Impl Parent (io-impl-parent) .......... SKIPPED
[INFO] Cytoscape IO Impl (io-impl) ........................ SKIPPED
[INFO] Cytoscape Layout Impl (layout-impl) ................ SKIPPED
[INFO] Cytoscape Ding View/Presentation Impl Performance (ding-impl-performance-debug) SKIPPED
[INFO] Cytoscape Editor Impl (editor-impl) ................ SKIPPED
[INFO] Cytoscape Equation Functions Impl (equations-functions-impl) SUCCESS [ 30.728 s]
[INFO] Cytoscape GraphML Impl (graphml-impl) .............. SKIPPED
[INFO] Cytoscape IO Impl Performance (io-impl-performance)  SKIPPED
[INFO] Cytoscape Jobs Impl (jobs-impl) .................... SUCCESS [ 34.109 s]
[INFO] Cytoscape Layout Algorithms Impl (layout-cytoscape-impl) SUCCESS [01:14 min]
[INFO] Cytoscape JGraph Layout Impl (layout-jgraph-impl) .. SUCCESS [ 25.086 s]
[INFO] Cytoscape Prefuse Layout Impl (layout-prefuse-impl)  SUCCESS [ 30.926 s]
[INFO] Cytoscape Linkout Impl (linkout-impl) .............. SUCCESS [ 30.957 s]
[INFO] Cytoscape Log Swing Impl (log-swing-impl) .......... SUCCESS [ 30.727 s]
[INFO] Cytoscape Manual Layout Impl (manual-layout-impl) .. SUCCESS [ 40.695 s]
[INFO] Cytoscape Model Impl Performance Debug (model-impl-performance-debug) SKIPPED
[INFO] Cytoscape Model Impl Table Performance Debug (model-impl-table-performance-debug) SKIPPED
[INFO] Cytoscape App Impl (app-impl) ...................... SKIPPED
[INFO] Cytoscape Presentation Impl (presentation-impl) .... SUCCESS [ 28.056 s]
[INFO] Cytoscape Property Impl (property-impl) ............ SUCCESS [ 27.552 s]
[INFO] Cytoscape Search Impl (search-impl) ................ SUCCESS [ 30.831 s]
[INFO] Cytoscape Session Impl (session-impl) .............. SUCCESS [ 28.162 s]
[INFO] Cytoscape Swing Utility Impl (swing-util-impl) ..... SUCCESS [ 26.823 s]
[INFO] Cytoscape Swing Application Impl (swing-application-impl) SKIPPED
[INFO] Cytoscape Table Browser Impl (table-browser-impl) .. SKIPPED
[INFO] Cytoscape Table Import Impl (table-import-impl) .... SKIPPED
[INFO] Cytoscape VizMap GUI Core Impl (vizmap-gui-core-impl) SUCCESS [ 25.599 s]
[INFO] Cytoscape VizMap GUI Impl (vizmap-gui-impl) ........ SUCCESS [01:44 min]
[INFO] Cytoscape VizMap Impl Parent (vizmap-impl-parent) .. SKIPPED
[INFO] Cytoscape VizMap Impl (vizmap-impl) ................ SKIPPED
[INFO] Cytoscape Webservice Impl (webservice-impl) ........ SUCCESS [ 33.637 s]
[INFO] org.cytoscape.work-headless-impl ................... SUCCESS [ 23.201 s]
[INFO] org.cytoscape.work-impl ............................ SUCCESS [ 27.965 s]
[INFO] Cytoscape Work Swing Impl Parent (work-swing-impl-parent) SUCCESS [ 24.385 s]
[INFO] Cytoscape Work Swing Impl (work-swing-impl) ........ SUCCESS [ 50.520 s]
[INFO] Cytoscape Application Impl (application-impl) ...... SKIPPED
[INFO] Cytoscape Datasource Impl (datasource-impl) ........ SUCCESS [ 36.735 s]
[INFO] Cytoscape Support Parent Project POM ............... SUCCESS [  0.201 s]
[INFO] Cytoscape Launch Framework ......................... SUCCESS [  0.162 s]
[INFO] CommandLine Provider ............................... SUCCESS [ 17.499 s]
[INFO] Cytoscape GUI Command Line Parser Impl (gui-cmdline-parser-impl) SUCCESS [ 26.919 s]
[INFO] Cytoscape Edge Bundler Impl (edge-bundler-impl) .... SUCCESS [ 26.948 s]
[INFO] Cytoscape Scripting Impl (scripting-impl) .......... SKIPPED
[INFO] Cytoscape Core Task Impl (core-task-impl) .......... SKIPPED
[INFO] Cytoscape Headless Application Impl (headless-application-impl) SUCCESS [ 24.411 s]
[INFO] org.cytoscape.cy-commons-cli ....................... SUCCESS [ 31.338 s]
[INFO] Cytoscape Headless Command Line Parser Impl (headless-cmdline-parser-impl) SUCCESS [ 26.762 s]
[INFO] Cytoscape 3 App Archetypes Parent .................. SUCCESS [  2.012 s]
[INFO] Cytoscape 3 Archetype - Creates an App providing public API SUCCESS [  2.978 s]
[INFO] Cytoscape 3 Archetype - Creates an App with a Task . SUCCESS [  0.396 s]
[INFO] Cytoscape 3 Archetype - Creates a CyAction (menu item) for desktop application SUCCESS [  0.383 s]
[INFO] Cytoscape 3 Archetype - Creates a Meta-App to install multiple related apps SUCCESS [  0.405 s]
[INFO] org.cytoscape.integration-test-support ............. SUCCESS [ 20.894 s]
[INFO] Launcher ........................................... SUCCESS [ 13.072 s]
[INFO] StartLevel Assembly ................................ SUCCESS [  0.567 s]
[INFO] Tasks for Testing .................................. SUCCESS [ 22.403 s]
[INFO] Cytoscape Desktop Application Distribution ......... SUCCESS [  0.154 s]
[INFO] Cytoscape Third-Party Dependencies (third-party) ... FAILURE [05:14 min]
[INFO] SplashScreen Launcher .............................. SKIPPED
[INFO] Cytoscape Launcher ................................. SKIPPED
[INFO] Splash Updater ..................................... SKIPPED
[INFO] Cytoscape Command Line Provider Implementation ..... SKIPPED
[INFO] Cytoscape Diagnostics .............................. SKIPPED
[INFO] Cytoscape Branding ................................. SKIPPED
[INFO] Cytoscape Application Implementation Metadata ...... SKIPPED
[INFO] Cytoscape GUI-Distribution Integration Test (integration-test) SKIPPED
[INFO] Cytoscape Feature Repository ....................... SKIPPED
[INFO] Cytoscape Karaf Distribution ....................... SKIPPED
[INFO] Distribution ....................................... SKIPPED
[INFO] Cytoscape Project POM .............................. SKIPPED
[INFO] ------------------------------------------------------------------------
[INFO] BUILD FAILURE
[INFO] ------------------------------------------------------------------------
[INFO] Total time:  41:02 min
[INFO] Finished at: 2022-12-10T11:33:22Z
[INFO] ------------------------------------------------------------------------
[ERROR] Java heap space -> [Help 1]
[ERROR] 
[ERROR] To see the full stack trace of the errors, re-run Maven with the -e switch.
[ERROR] Re-run Maven using the -X switch to enable full debug logging.
[ERROR] 
[ERROR] For more information about the errors and possible solutions, please read the following articles:
[ERROR] [Help 1] http://cwiki.apache.org/confluence/display/MAVEN/OutOfMemoryError
*** Error code 1

Stop.
make: stopped in /usr/ports/biology/cytoscape