From nobody Tue Aug 30 16:37:44 2022 X-Original-To: pkg-fallout@mlmmj.nyi.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2610:1c1:1:606c::19:1]) by mlmmj.nyi.freebsd.org (Postfix) with ESMTP id 4MHCf12rTZz4Zrwm for ; Tue, 30 Aug 2022 16:37:45 +0000 (UTC) (envelope-from pkg-fallout@FreeBSD.org) Received: from mxrelay.nyi.freebsd.org (mxrelay.nyi.freebsd.org [IPv6:2610:1c1:1:606c::19:3]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (4096 bits) server-digest SHA256 client-signature RSA-PSS (4096 bits) client-digest SHA256) (Client CN "mxrelay.nyi.freebsd.org", Issuer "R3" (verified OK)) by mx1.freebsd.org (Postfix) with ESMTPS id 4MHCf106t8z46GT; Tue, 30 Aug 2022 16:37:45 +0000 (UTC) (envelope-from pkg-fallout@FreeBSD.org) Received: from beefy17.nyi.freebsd.org (beefy17.nyi.freebsd.org [IPv6:2610:1c1:1:6080::16:20]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (4096 bits) server-digest SHA256) (Client did not present a certificate) by mxrelay.nyi.freebsd.org (Postfix) with ESMTPS id 4MHCf0603tzqS6; Tue, 30 Aug 2022 16:37:44 +0000 (UTC) (envelope-from pkg-fallout@FreeBSD.org) Received: from beefy17.nyi.freebsd.org (localhost [127.0.0.1]) by beefy17.nyi.freebsd.org (8.16.1/8.16.1) with ESMTP id 27UGbiFx099439; Tue, 30 Aug 2022 16:37:44 GMT (envelope-from pkg-fallout@FreeBSD.org) Received: (from root@localhost) by beefy17.nyi.freebsd.org (8.16.1/8.16.1/Submit) id 27UGbiPM099437; Tue, 30 Aug 2022 16:37:44 GMT (envelope-from pkg-fallout@FreeBSD.org) Date: Tue, 30 Aug 2022 16:37:44 GMT From: pkg-fallout@FreeBSD.org Message-Id: <202208301637.27UGbiPM099437@beefy17.nyi.freebsd.org> To: yuri@FreeBSD.org Subject: [package - main-i386-default][biology/igv] Failed for igv-2.9.4 in build Cc: pkg-fallout@FreeBSD.org ARC-Message-Signature: i=1; a=rsa-sha256; c=relaxed/relaxed; d=freebsd.org; s=dkim; t=1661877465; h=from:from:reply-to:subject:subject:date:date:message-id:message-id: to:to:cc:cc; bh=lNnSKgKQ9QNlNdbklDBPhl1GPGZL0CwfzQU4vhu0mWM=; b=gpytw05w6361XzqaBPFxRWm6idThooYbDnK1pWmhwHcw6Eu4MwNZfXqXpYxHv79rZExKmJ 3MDDjVQ7rWT06Y3l7DG52dXn9kwrYHLOm3imNnKVdmqVn9pZXFDz4aLlvwHCRJh2bgcLGi V4h+XTR8xI9LpLTZ0PNOcuPFP0mlxzSrhbTTjYu77jPS2ks1AGWeSXxseyX/au0MGQSL2Z nNKq+0T34Bf3EBGrJL9n6Ap5Gfiq6CihMhc3QcOyg/d/HBDoUiiGNuSuxkSbALActRvP0e 4lM68kevWAPu9JoQzc0UBgvRUZ5VcH7sikFMUE9TutNJf5t4iO+KI/DZdN626w== ARC-Seal: i=1; s=dkim; d=freebsd.org; t=1661877465; a=rsa-sha256; cv=none; b=i+SqcweNxTK+ZNfci8i1WCYElpPN7WbALv2k5m1tt+4+bcIeeNpwGu81OI/PTu09ep1QgO 5U0Ua4bj5u8fciAd00dDM356ZQQROQU8B2hX0RChBJ5MlX77VU7LFTnajZp/oMhxGCBnW9 jArW0hI4oByDiSrVMaA+U8SzpqOtv2Ia4E/vQ54uC/S4Jd7J0guT7zGnJw6Ti38+54hg6n b9XiFi39O7gEhNw4TUYe3pmRVgGNJDqP/F5aSiSV11h0KeY4suqiSgC2G9ACbVGGgO3Czs ibcBcRVbo5N95NJLH5YmyTdkKPy6GnlxyzzKm8+AAndkpblZJ9QHwjaOYa2Kpg== ARC-Authentication-Results: i=1; mx1.freebsd.org; none X-ThisMailContainsUnwantedMimeParts: N List-Id: Fallout logs from package building List-Archive: https://lists.freebsd.org/archives/freebsd-pkg-fallout List-Help: List-Post: List-Subscribe: List-Unsubscribe: Sender: owner-freebsd-pkg-fallout@freebsd.org You are receiving this mail as a port that you maintain is failing to build on the FreeBSD package build server. Please investigate the failure and submit a PR to fix build. Maintainer: yuri@FreeBSD.org Log URL: http://beefy17.nyi.freebsd.org/data/main-i386-default/p70f144086a03_sbb31aee26b/logs/igv-2.9.4.log Build URL: http://beefy17.nyi.freebsd.org/build.html?mastername=main-i386-default&build=p70f144086a03_sbb31aee26b Log: =>> Building biology/igv build started at Tue Aug 30 16:37:19 UTC 2022 port directory: /usr/ports/biology/igv package name: igv-2.9.4 building for: FreeBSD main-i386-default-job-11 14.0-CURRENT FreeBSD 14.0-CURRENT 1400066 i386 maintained by: yuri@FreeBSD.org Makefile ident: Poudriere version: 3.2.8-21-g883afb07 Host OSVERSION: 1400063 Jail OSVERSION: 1400066 Job Id: 11 !!! Jail is newer than host. (Jail: 1400066, Host: 1400063) !!! !!! This is not supported. !!! !!! Host kernel must be same or newer than jail. !!! !!! Expect build failures. !!! ---Begin Environment--- SHELL=/bin/sh UNAME_p=i386 UNAME_m=i386 OSVERSION=1400066 UNAME_v=FreeBSD 14.0-CURRENT 1400066 UNAME_r=14.0-CURRENT BLOCKSIZE=K MAIL=/var/mail/root MM_CHARSET=UTF-8 LANG=C.UTF-8 STATUS=1 HOME=/root PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin LOCALBASE=/usr/local USER=root LIBEXECPREFIX=/usr/local/libexec/poudriere POUDRIERE_VERSION=3.2.8-21-g883afb07 MASTERMNT=/usr/local/poudriere/data/.m/main-i386-default/ref POUDRIERE_BUILD_TYPE=bulk PACKAGE_BUILDING=yes SAVED_TERM= PWD=/usr/local/poudriere/data/.m/main-i386-default/ref/.p/pool P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS MASTERNAME=main-i386-default SCRIPTPREFIX=/usr/local/share/poudriere OLDPWD=/usr/local/poudriere/data/.m/main-i386-default/ref/.p SCRIPTPATH=/usr/local/share/poudriere/bulk.sh POUDRIEREPATH=/usr/local/bin/poudriere ---End Environment--- ---Begin Poudriere Port Flags/Env--- PORT_FLAGS= PKGENV= FLAVOR= DEPENDS_ARGS= MAKE_ARGS= ---End Poudriere Port Flags/Env--- ---Begin OPTIONS List--- ---End OPTIONS List--- --MAINTAINER-- yuri@FreeBSD.org --End MAINTAINER-- --CONFIGURE_ARGS-- --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- XDG_DATA_HOME=/wrkdirs/usr/ports/biology/igv/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/igv/work XDG_CACHE_HOME=/wrkdirs/usr/ports/biology/igv/work/.cache HOME=/wrkdirs/usr/ports/biology/igv/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/biology/igv/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/biology/igv/work/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig SHELL=/bin/sh CONFIG_SHELL=/bin/sh --End CONFIGURE_ENV-- --MAKE_ENV-- GRADLE_USER_HOME=/wrkdirs/usr/ports/biology/igv/work JAVA_HOME=/usr/local/openjdk11 XDG_DATA_HOME=/wrkdirs/usr/ports/biology/igv/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/igv/work XDG_CACHE_HOME=/wrkdirs/usr/ports/biology/igv/work/.cache HOME=/wrkdirs/usr/ports/biology/igv/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/biology/igv/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/biology/igv/work/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES PREFIX=/usr/local LOCALBASE=/usr/local CC="cc" CFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " CPP="cpp" CPPFLAGS="" LDFLAGS=" -fstack-protector-strong " LIBS="" CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" --End MAKE_ENV-- --PLIST_SUB-- JAVASHAREDIR="share/java" JAVAJARDIR="share/java/classes" OSREL=14.0 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/igv" EXAMPLESDIR="share/examples/igv" DATADIR="share/igv" WWWDIR="www/igv" ETCDIR="etc/igv" --End PLIST_SUB-- --SUB_LIST-- JAVA_HOME=/usr/local/openjdk11 JAVASHAREDIR="/usr/local/share/java" JAVAJARDIR="/usr/local/share/java/classes" JAVALIBDIR="/usr/local/share/java/classes" JAVA_VERSION="11" PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/igv DOCSDIR=/usr/local/share/doc/igv EXAMPLESDIR=/usr/local/share/examples/igv WWWDIR=/usr/local/www/igv ETCDIR=/usr/local/etc/igv --End SUB_LIST-- ---Begin make.conf--- USE_PACKAGE_DEPENDS=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles PACKAGE_BUILDING=yes PACKAGE_BUILDING_FLAVORS=yes MACHINE=i386 MACHINE_ARCH=i386 ARCH=${MACHINE_ARCH} #### /usr/local/etc/poudriere.d/make.conf #### # XXX: We really need this but cannot use it while 'make checksum' does not # try the next mirror on checksum failure. It currently retries the same # failed mirror and then fails rather then trying another. It *does* # try the next if the size is mismatched though. #MASTER_SITE_FREEBSD=yes # Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs MAKE_JOBS_NUMBER=2 #### /usr/ports/Mk/Scripts/ports_env.sh #### _CCVERSION_921dbbb2=FreeBSD clang version 14.0.5 (https://github.com/llvm/llvm-project.git llvmorg-14.0.5-0-gc12386ae247c) Target: i386-unknown-freebsd14.0 Thread model: posix InstalledDir: /usr/bin _ALTCCVERSION_921dbbb2=none _CXXINTERNAL_acaad9ca=FreeBSD clang version 14.0.5 (https://github.com/llvm/llvm-project.git llvmorg-14.0.5-0-gc12386ae247c) Target: i386-unknown-freebsd14.0 Thread model: posix InstalledDir: /usr/bin "/usr/bin/ld" "--eh-frame-hdr" "-dynamic-linker" "/libexec/ld-elf.so.1" "--hash-style=both" "--enable-new-dtags" "-m" "elf_i386_fbsd" "-o" "a.out" "/usr/lib/crt1.o" "/usr/lib/crti.o" "/usr/lib/crtbegin.o" "-L/usr/lib" "/dev/null" "-lc++" "-lm" "-lgcc" "--as-needed" "-lgcc_s" "--no-as-needed" "-lc" "-lgcc" "--as-needed" "-lgcc_s" "--no-as-needed" "/usr/lib/crtend.o" "/usr/lib/crtn.o" CC_OUTPUT_921dbbb2_58173849=yes CC_OUTPUT_921dbbb2_9bdba57c=yes CC_OUTPUT_921dbbb2_6a4fe7f5=yes CC_OUTPUT_921dbbb2_6bcac02b=yes CC_OUTPUT_921dbbb2_67d20829=yes CC_OUTPUT_921dbbb2_bfa62e83=yes CC_OUTPUT_921dbbb2_f0b4d593=yes CC_OUTPUT_921dbbb2_308abb44=yes CC_OUTPUT_921dbbb2_f00456e5=yes CC_OUTPUT_921dbbb2_65ad290d=yes CC_OUTPUT_921dbbb2_f2776b26=yes CC_OUTPUT_921dbbb2_b2657cc3=yes CC_OUTPUT_921dbbb2_380987f7=yes CC_OUTPUT_921dbbb2_160933ec=yes CC_OUTPUT_921dbbb2_fb62803b=yes _OBJC_CCVERSION_921dbbb2=FreeBSD clang version 14.0.5 (https://github.com/llvm/llvm-project.git llvmorg-14.0.5-0-gc12386ae247c) Target: i386-unknown-freebsd14.0 Thread model: posix InstalledDir: /usr/bin _OBJC_ALTCCVERSION_921dbbb2=none ARCH=i386 OPSYS=FreeBSD _OSRELEASE=14.0-CURRENT OSREL=14.0 OSVERSION=1400066 PYTHONBASE=/usr/local CONFIGURE_MAX_CMD_LEN=524288 HAVE_PORTS_ENV=1 #### Misc Poudriere #### GID=0 UID=0 ---End make.conf--- --Resource limits-- cpu time (seconds, -t) unlimited file size (512-blocks, -f) unlimited data seg size (kbytes, -d) 524288 stack size (kbytes, -s) 65536 core file size (512-blocks, -c) unlimited max memory size (kbytes, -m) unlimited locked memory (kbytes, -l) unlimited max user processes (-u) 89999 open files (-n) 1024 virtual mem size (kbytes, -v) unlimited swap limit (kbytes, -w) unlimited socket buffer size (bytes, -b) unlimited pseudo-terminals (-p) unlimited kqueues (-k) unlimited umtx shared locks (-o) unlimited --End resource limits-- =================================================== ===> License MIT accepted by the user =========================================================================== =================================================== ===> igv-2.9.4 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-1.18.4.pkg [main-i386-default-job-11] Installing pkg-1.18.4... [main-i386-default-job-11] Extracting pkg-1.18.4: .......... done ===> igv-2.9.4 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of igv-2.9.4 =========================================================================== =================================================== =========================================================================== =================================================== ===> License MIT accepted by the user ===> Fetching all distfiles required by igv-2.9.4 for building =========================================================================== =================================================== ===> License MIT accepted by the user ===> Fetching all distfiles required by igv-2.9.4 for building => SHA256 Checksum OK for igv-2.9.4/tools.png. => SHA256 Checksum OK for igv-2.9.4/igv-2.9.4-deps.tar.gz. => SHA256 Checksum OK for igv-2.9.4/igvteam-igv-v2.9.4_GH0.tar.gz. =========================================================================== =================================================== =========================================================================== =================================================== ===> License MIT accepted by the user ===> Fetching all distfiles required by igv-2.9.4 for building ===> Extracting for igv-2.9.4 => SHA256 Checksum OK for igv-2.9.4/tools.png. => SHA256 Checksum OK for igv-2.9.4/igv-2.9.4-deps.tar.gz. => SHA256 Checksum OK for igv-2.9.4/igvteam-igv-v2.9.4_GH0.tar.gz. =========================================================================== =================================================== =========================================================================== =================================================== ===> Patching for igv-2.9.4 =========================================================================== =================================================== ===> igv-2.9.4 depends on package: openjfx14>0 - not found * /usr/local/etc/ssl/cert.pem * /usr/local/openssl/cert.pem ===== Message from argp-standalone-1.5.0: -- ===> NOTICE: The argp-standalone port currently does not have a maintainer. As a result, it is more likely to have unresolved issues, not be up-to-date, or even be removed in the future. To volunteer to maintain this port, please create an issue at: https://bugs.freebsd.org/bugzilla More information about port maintainership is available at: https://docs.freebsd.org/en/articles/contributing/#ports-contributing ===== Message from wayland-1.21.0: -- Wayland requires XDG_RUNTIME_DIR to be defined to a path that will contain "wayland-%d" unix(4) sockets. This is usually handled by consolekit2 (via ck-launch-session) or pam_xdg (via login). ===== Message from dejavu-2.37_1: -- Make sure that the freetype module is loaded. If it is not, add the following line to the "Modules" section of your X Windows configuration file: Load "freetype" Add the following line to the "Files" section of X Windows configuration file: FontPath "/usr/local/share/fonts/dejavu/" Note: your X Windows configuration file is typically /etc/X11/XF86Config if you are using XFree86, and /etc/X11/xorg.conf if you are using X.Org. ===== Message from libxkbcommon-1.4.1: -- If arrow keys don't work under X11 switch to legacy rules e.g., For sh/bash/ksh/zsh run and (optionally) add into ~/.profile: export XKB_DEFAULT_RULES=xorg For csh/tcsh run and (optionally) add into ~/.login: setenv XKB_DEFAULT_RULES xorg ===== Message from openjdk11-11.0.16+8.1: -- This OpenJDK implementation requires fdescfs(5) mounted on /dev/fd and procfs(5) mounted on /proc. If you have not done it yet, please do the following: mount -t fdescfs fdesc /dev/fd mount -t procfs proc /proc To make it permanent, you need the following lines in /etc/fstab: fdesc /dev/fd fdescfs rw 0 0 proc /proc procfs rw 0 0 ===> igv-2.9.4 depends on package: openjfx14>0 - found ===> Returning to build of igv-2.9.4 ===> igv-2.9.4 depends on executable: gradle - not found ===> Installing existing package /packages/All/gradle6-6.9.pkg [main-i386-default-job-11] Installing gradle6-6.9... [main-i386-default-job-11] `-- Installing openjdk8-8.342.07.1... [main-i386-default-job-11] | `-- Installing java-zoneinfo-2021.e... [main-i386-default-job-11] | `-- Extracting java-zoneinfo-2021.e: .......... done [main-i386-default-job-11] | `-- Installing libinotify-20211018... [main-i386-default-job-11] | `-- Extracting libinotify-20211018: .......... done [main-i386-default-job-11] `-- Extracting openjdk8-8.342.07.1: .......... done [main-i386-default-job-11] Extracting gradle6-6.9: .......... done ===== Message from libinotify-20211018: -- You might want to consider increasing the kern.maxfiles tunable if you plan to use this library for applications that need to monitor activity of a lot of files. ===== Message from openjdk8-8.342.07.1: -- This OpenJDK implementation requires fdescfs(5) mounted on /dev/fd and procfs(5) mounted on /proc. If you have not done it yet, please do the following: mount -t fdescfs fdesc /dev/fd mount -t procfs proc /proc To make it permanent, you need the following lines in /etc/fstab: fdesc /dev/fd fdescfs rw 0 0 proc /proc procfs rw 0 0 ===> igv-2.9.4 depends on executable: gradle - found ===> Returning to build of igv-2.9.4 ===> igv-2.9.4 depends on file: /usr/local/openjdk11/bin/java - found =========================================================================== =================================================== ===> igv-2.9.4 depends on shared library: libintl.so - found (/usr/local/lib/libintl.so) =========================================================================== =================================================== ===> Configuring for igv-2.9.4 =========================================================================== =================================================== ===> Building for igv-2.9.4 cd /wrkdirs/usr/ports/biology/igv/work/igv-2.9.4 && /usr/bin/env GRADLE_USER_HOME=/wrkdirs/usr/ports/biology/igv/work JAVA_HOME=/usr/local/openjdk11 XDG_DATA_HOME=/wrkdirs/usr/ports/biology/igv/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/igv/work XDG_CACHE_HOME=/wrkdirs/usr/ports/biology/igv/work/.cache HOME=/wrkdirs/usr/ports/biology/igv/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/biology/igv/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/biology/igv/work/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES PREFIX=/usr/local LOCALBASE=/usr/local CC="cc" CFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " CPP="cpp" CPPFLAGS="" LDFLAGS=" -fstack-protector-strong " LIBS="" CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " MANPREFIX="/usr/local" BSD_I NSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" gradle --gradle-user-home /wrkdirs/usr/ports/biology/igv/work/gradle-igv --project-cache-dir /wrkdirs/usr/ports/biology/igv/work/gradle-igv --offline --build-cache --stacktrace createDist Welcome to Gradle 6.9! Here are the highlights of this release: - This is a small backport release. - Java 16 can be used to compile when used with Java toolchains - Dynamic versions can be used within plugin declarations - Native support for Apple Silicon processors For more details see https://docs.gradle.org/6.9/release-notes.html Starting a Gradle Daemon (subsequent builds will be faster) The message received from the daemon indicates that the daemon has disappeared. Build request sent: Build{id=4bdad2ff-f2b4-4ab8-98b8-fdc314d65868, currentDir=/wrkdirs/usr/ports/biology/igv/work/igv-2.9.4} Attempting to read last messages from the daemon log... Daemon pid: 97120 log file: /wrkdirs/usr/ports/biology/igv/work/gradle-igv/daemon/6.9/daemon-97120.out.log ----- Last 20 lines from daemon log file - daemon-97120.out.log ----- 2022-08-30T16:37:37.047+0000 [DEBUG] [org.gradle.cache.internal.DefaultFileLockManager] Lock acquired on daemon addresses registry. 2022-08-30T16:37:37.048+0000 [DEBUG] [org.gradle.cache.internal.DefaultFileLockManager] Releasing lock on daemon addresses registry. 2022-08-30T16:37:37.048+0000 [DEBUG] [org.gradle.launcher.daemon.server.DaemonStateCoordinator] resetting idle timer 2022-08-30T16:37:37.049+0000 [DEBUG] [org.gradle.launcher.daemon.server.DaemonStateCoordinator] daemon is running. Sleeping until state changes. 2022-08-30T16:37:37.049+0000 [INFO] [org.gradle.launcher.daemon.server.exec.StartBuildOrRespondWithBusy] Daemon is about to start building Build{id=4bdad2ff-f2b4-4ab8-98b8-fdc314d65868, currentDir=/wrkdirs/usr/ports/biology/igv/work/igv-2.9.4}. Dispatching build started information... 2022-08-30T16:37:37.050+0000 [DEBUG] [org.gradle.launcher.daemon.server.SynchronizedDispatchConnection] thread 20: dispatching org.gradle.launcher.daemon.protocol.BuildStarted@1f2548a 2022-08-30T16:37:37.052+0000 [DEBUG] [org.gradle.launcher.daemon.server.exec.EstablishBuildEnvironment] Configuring env variables: [P_PORTS_FEATURES, PATH, MASTERMNT, CXX, CPP, META_MODE, MASTERNAME, BSD_INSTALL_PROGRAM, SAVED_TERM, UNAME_m, LDFLAGS, UNAME_r, XDG_CACHE_HOME, UNAME_p, NO_LINT, STATUS, SCRIPTPREFIX, UNAME_v, BSD_INSTALL_MAN, POUDRIERE_BUILD_TYPE, MAIL, OSREL, NO_DEPENDS, MM_CHARSET, PWD, GID, SHELL, CPPFLAGS, PKG_CONFIG_LIBDIR, _OSRELEASE, BSD_INSTALL_LIB, OLDPWD, LIBS, TMPDIR, UID, OSVERSION, LC_ALL, PREFIX, SCRIPTPATH, MK_DEBUG_FILES, MANPREFIX, BLOCKSIZE, MAKEFLAGS, JAVA_HOME, ARCH, LANG, OPSYS, LOCALBASE, GRADLE_USER_HOME, CFLAGS, MK_KERNEL_SYMBOLS, BSD_INSTALL_SCRIPT, CC, XDG_DATA_HOME, POUDRIERE_VERSION, BSD_INSTALL_DATA, USER, XDG_CONFIG_HOME, NO_PIE, MAKELEVEL, LIBEXECPREFIX, POUDRIEREPATH, PACKAGE_BUILDING, HOME, CXXFLAGS] 2022-08-30T16:37:37.053+0000 [WARN] [org.gradle.launcher.daemon.server.exec.EstablishBuildEnvironment] Warning: Unable able to set daemon's environment variables to match the client because: There is no native integration with this operating environment. If the daemon was started with a significantly different environment from the client, and your build relies on environment variables, you may experience unexpected behavior. 2022-08-30T16:37:37.054+0000 [DEBUG] [org.gradle.launcher.daemon.server.SynchronizedDispatchConnection] thread 18: received class org.gradle.launcher.daemon.protocol.CloseInput 2022-08-30T16:37:37.054+0000 [DEBUG] [org.gradle.launcher.daemon.server.DefaultDaemonConnection] thread 18: Received IO message from client: org.gradle.launcher.daemon.protocol.CloseInput@1f37638 2022-08-30T16:37:37.055+0000 [DEBUG] [org.gradle.launcher.daemon.server.exec.LogToClient] About to start relaying all logs to the client via the connection. 2022-08-30T16:37:37.055+0000 [INFO] [org.gradle.launcher.daemon.server.exec.LogToClient] The client will now receive all logging from the daemon (pid: 97120). The daemon log file: /wrkdirs/usr/ports/biology/igv/work/gradle-igv/daemon/6.9/daemon-97120.out.log 2022-08-30T16:37:37.058+0000 [INFO] [org.gradle.launcher.daemon.server.exec.LogAndCheckHealth] Starting build in new daemon [memory: 512 MiB] 2022-08-30T16:37:37.059+0000 [INFO] [org.gradle.launcher.daemon.server.exec.ForwardClientInput] Closing daemon's stdin at end of input. 2022-08-30T16:37:37.059+0000 [INFO] [org.gradle.launcher.daemon.server.exec.ForwardClientInput] The daemon will no longer process any standard input. 2022-08-30T16:37:37.065+0000 [DEBUG] [org.gradle.launcher.daemon.server.exec.ExecuteBuild] The daemon has started executing the build. 2022-08-30T16:37:37.065+0000 [DEBUG] [org.gradle.launcher.daemon.server.exec.ExecuteBuild] Executing build with daemon context: DefaultDaemonContext[uid=41be096a-b7fe-4295-a121-20c96bf313de,javaHome=/usr/local/openjdk11,daemonRegistryDir=/wrkdirs/usr/ports/biology/igv/work/gradle-igv/daemon,pid=97120,idleTimeout=10800000,priority=NORMAL,daemonOpts=--add-opens,java.base/java.util=ALL-UNNAMED,--add-opens,java.base/java.lang=ALL-UNNAMED,--add-opens,java.base/java.lang.invoke=ALL-UNNAMED,--add-opens,java.prefs/java.util.prefs=ALL-UNNAMED,-XX:MaxMetaspaceSize=256m,-XX:+HeapDumpOnOutOfMemoryError,-Xms256m,-Xmx512m,-Dfile.encoding=US-ASCII,-Duser.country=US,-Duser.language=en,-Duser.variant] ----- End of the daemon log ----- JVM crash log found: file:///wrkdirs/usr/ports/biology/igv/work/gradle-igv/daemon/6.9/hs_err_pid97120.log FAILURE: Build failed with an exception. * What went wrong: Gradle build daemon disappeared unexpectedly (it may have been killed or may have crashed) * Try: Run with --info or --debug option to get more log output. Run with --scan to get full insights. * Exception is: org.gradle.launcher.daemon.client.DaemonDisappearedException: Gradle build daemon disappeared unexpectedly (it may have been killed or may have crashed) at org.gradle.launcher.daemon.client.DaemonClient.handleDaemonDisappearance(DaemonClient.java:249) at org.gradle.launcher.daemon.client.DaemonClient.monitorBuild(DaemonClient.java:222) at org.gradle.launcher.daemon.client.DaemonClient.executeBuild(DaemonClient.java:184) at org.gradle.launcher.daemon.client.DaemonClient.execute(DaemonClient.java:147) at org.gradle.launcher.daemon.client.DaemonClient.execute(DaemonClient.java:98) at org.gradle.launcher.cli.RunBuildAction.run(RunBuildAction.java:57) at org.gradle.internal.Actions$RunnableActionAdapter.execute(Actions.java:212) at org.gradle.launcher.cli.DefaultCommandLineActionFactory$ParseAndBuildAction.execute(DefaultCommandLineActionFactory.java:275) at org.gradle.launcher.cli.DefaultCommandLineActionFactory$ParseAndBuildAction.execute(DefaultCommandLineActionFactory.java:247) at org.gradle.launcher.cli.DebugLoggerWarningAction.execute(DebugLoggerWarningAction.java:82) at org.gradle.launcher.cli.DebugLoggerWarningAction.execute(DebugLoggerWarningAction.java:30) at org.gradle.launcher.cli.WelcomeMessageAction.execute(WelcomeMessageAction.java:92) at org.gradle.launcher.cli.WelcomeMessageAction.execute(WelcomeMessageAction.java:38) at org.gradle.launcher.cli.NativeServicesInitializingAction.execute(NativeServicesInitializingAction.java:44) at org.gradle.launcher.cli.NativeServicesInitializingAction.execute(NativeServicesInitializingAction.java:26) at org.gradle.launcher.cli.ExceptionReportingAction.execute(ExceptionReportingAction.java:41) at org.gradle.launcher.cli.ExceptionReportingAction.execute(ExceptionReportingAction.java:26) at org.gradle.launcher.cli.DefaultCommandLineActionFactory$WithLogging.execute(DefaultCommandLineActionFactory.java:240) at org.gradle.launcher.Main.doAction(Main.java:35) at org.gradle.launcher.bootstrap.EntryPoint.run(EntryPoint.java:50) at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62) at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) at java.base/java.lang.reflect.Method.invoke(Method.java:566) at org.gradle.launcher.bootstrap.ProcessBootstrap.runNoExit(ProcessBootstrap.java:60) at org.gradle.launcher.bootstrap.ProcessBootstrap.run(ProcessBootstrap.java:37) at org.gradle.launcher.GradleMain.main(GradleMain.java:31) * Get more help at https://help.gradle.org *** Error code 1 Stop. make: stopped in /usr/ports/biology/igv