[exp - 123amd64-default-build-as-user][science/axom] Failed for axom-0.6.1.1671 in build
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Date: Fri, 26 Aug 2022 15:18:43 UTC
You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.
Maintainer: yuri@FreeBSD.org
Log URL: http://package19.nyi.freebsd.org/data/123amd64-default-build-as-user/957425c3e33f/logs/axom-0.6.1.1671.log
Build URL: http://package19.nyi.freebsd.org/build.html?mastername=123amd64-default-build-as-user&build=957425c3e33f
Log:
=>> Building science/axom
build started at Fri Aug 26 15:17:12 UTC 2022
port directory: /usr/ports/science/axom
package name: axom-0.6.1.1671
building for: FreeBSD 123amd64-default-build-as-user-job-06 12.3-RELEASE-p6 FreeBSD 12.3-RELEASE-p6 amd64
maintained by: yuri@FreeBSD.org
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===> The following configuration options are available for axom-0.6.1.1671:
LUA=on: Lua scripting language support
MFEM=on: Use mfem - library for finite element methods
MPI=on: MPI (Message Passing Interface) support
OPENMP=off: Parallel processing support via OpenMP
===> Use 'make config' to modify these settings
---End OPTIONS List---
--MAINTAINER--
yuri@FreeBSD.org
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--CONFIGURE_ARGS--
--End CONFIGURE_ARGS--
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=======================<phase: check-sanity >============================
===> License BSD3CLAUSE accepted by the user
===========================================================================
=======================<phase: pkg-depends >============================
===> axom-0.6.1.1671 depends on file: /usr/local/sbin/pkg - not found
===> Installing existing package /packages/All/pkg-1.18.4.pkg
[123amd64-default-build-as-user-job-06] Installing pkg-1.18.4...
[123amd64-default-build-as-user-job-06] Extracting pkg-1.18.4: .......... done
===> axom-0.6.1.1671 depends on file: /usr/local/sbin/pkg - found
===> Returning to build of axom-0.6.1.1671
===========================================================================
=======================<phase: fetch-depends >============================
===========================================================================
=======================<phase: fetch >============================
===> License BSD3CLAUSE accepted by the user
=> LLNL-axom-v0.6.1-1671-g88cac2607_GH0.tar.gz doesn't seem to exist in /portdistfiles/.
=> Attempting to fetch https://codeload.github.com/LLNL/axom/tar.gz/v0.6.1-1671-g88cac2607?dummy=/LLNL-axom-v0.6.1-1671-g88cac2607_GH0.tar.gz
fetch: https://codeload.github.com/LLNL/axom/tar.gz/v0.6.1-1671-g88cac2607?dummy=/LLNL-axom-v0.6.1-1671-g88cac2607_GH0.tar.gz: size unknown
fetch: https://codeload.github.com/LLNL/axom/tar.gz/v0.6.1-1671-g88cac2607?dummy=/LLNL-axom-v0.6.1-1671-g88cac2607_GH0.tar.gz: size of remote file is not known
LLNL-axom-v0.6.1-1671-g88cac2607_GH0.tar.gz 11 MB 13 MBps 01s
===> Fetching all distfiles required by axom-0.6.1.1671 for building
===========================================================================
=======================<phase: checksum >============================
===> License BSD3CLAUSE accepted by the user
===> Fetching all distfiles required by axom-0.6.1.1671 for building
=> SHA256 Checksum OK for LLNL-axom-v0.6.1-1671-g88cac2607_GH0.tar.gz.
=> SHA256 Checksum OK for LLNL-axom_data-b3d8e6f_GH0.tar.gz.
=> SHA256 Checksum OK for LLNL-blt-ddd5a0c_GH0.tar.gz.
=> SHA256 Checksum OK for LLNL-uberenv-a121a45_GH0.tar.gz.
===========================================================================
=======================<phase: extract-depends>============================
===========================================================================
=======================<phase: extract >============================
===> License BSD3CLAUSE accepted by the user
===> Fetching all distfiles required by axom-0.6.1.1671 for building
===> Extracting for axom-0.6.1.1671
=> SHA256 Checksum OK for LLNL-axom-v0.6.1-1671-g88cac2607_GH0.tar.gz.
=> SHA256 Checksum OK for LLNL-axom_data-b3d8e6f_GH0.tar.gz.
=> SHA256 Checksum OK for LLNL-blt-ddd5a0c_GH0.tar.gz.
=> SHA256 Checksum OK for LLNL-uberenv-a121a45_GH0.tar.gz.
===========================================================================
=======================<phase: patch-depends >============================
===========================================================================
=======================<phase: patch >============================
===> Patching for axom-0.6.1.1671
===> Applying FreeBSD patches for axom-0.6.1.1671 from /usr/ports/science/axom/files
===========================================================================
=======================<phase: build-depends >============================
===> axom-0.6.1.1671 depends on package: openmpi>0 - not found
===> Installing existing package /packages/All/openmpi-4.1.4.pkg
[123amd64-default-build-as-user-job-06] Installing openmpi-4.1.4...
[123amd64-default-build-as-user-job-06] `-- Installing gcc11-11.3.0...
[123amd64-default-build-as-user-job-06] | `-- Installing binutils-2.37_4,1...
[123amd64-default-build-as-user-job-06] | | `-- Installing gettext-runtime-0.21...
[123amd64-default-build-as-user-job-06] | | `-- Installing indexinfo-0.3.1...
<snip>
In file included from /usr/local/include/HYPRE_utilities.h:20:
/usr/local/include/mpi.h:363:5: error: expected identifier
MPI_WIN_FLAVOR_ALLOCATE = 2,
^
/usr/local/mpi/openmpi/include/mpi.h:570:38: note: expanded from macro 'MPI_WIN_FLAVOR_ALLOCATE'
#define MPI_WIN_FLAVOR_ALLOCATE 2
^
In file included from /wrkdirs/usr/ports/science/axom/work/axom-0.6.1-1671-g88cac2607/src/axom/sidre/core/MFEMSidreDataCollection.cpp:19:
In file included from /wrkdirs/usr/ports/science/axom/work/axom-0.6.1-1671-g88cac2607/src/axom/sidre/core/MFEMSidreDataCollection.hpp:16:
In file included from /usr/local/include/mfem.hpp:2:
In file included from /usr/local/include/mfem/mfem.hpp:42:
In file included from /usr/local/include/mfem/linalg/linalg.hpp:21:
In file included from /usr/local/include/mfem/linalg/complex_operator.hpp:18:
In file included from /usr/local/include/mfem/linalg/hypre.hpp:25:
In file included from /usr/local/include/seq_mv.h:13:
In file included from /usr/local/include/HYPRE_seq_mv.h:17:
In file included from /usr/local/include/HYPRE_utilities.h:20:
/usr/local/include/mpi.h:364:5: error: expected identifier
MPI_WIN_FLAVOR_DYNAMIC = 3,
^
/usr/local/mpi/openmpi/include/mpi.h:571:38: note: expanded from macro 'MPI_WIN_FLAVOR_DYNAMIC'
#define MPI_WIN_FLAVOR_DYNAMIC 3
^
In file included from /wrkdirs/usr/ports/science/axom/work/axom-0.6.1-1671-g88cac2607/src/axom/sidre/core/MFEMSidreDataCollection.cpp:19:
In file included from /wrkdirs/usr/ports/science/axom/work/axom-0.6.1-1671-g88cac2607/src/axom/sidre/core/MFEMSidreDataCollection.hpp:16:
In file included from /usr/local/include/mfem.hpp:2:
In file included from /usr/local/include/mfem/mfem.hpp:42:
In file included from /usr/local/include/mfem/linalg/linalg.hpp:21:
In file included from /usr/local/include/mfem/linalg/complex_operator.hpp:18:
In file included from /usr/local/include/mfem/linalg/hypre.hpp:25:
In file included from /usr/local/include/seq_mv.h:13:
In file included from /usr/local/include/HYPRE_seq_mv.h:17:
In file included from /usr/local/include/HYPRE_utilities.h:20:
/usr/local/include/mpi.h:365:5: error: expected identifier
MPI_WIN_FLAVOR_SHARED = 4
^
/usr/local/mpi/openmpi/include/mpi.h:572:38: note: expanded from macro 'MPI_WIN_FLAVOR_SHARED'
#define MPI_WIN_FLAVOR_SHARED 4
^
In file included from /wrkdirs/usr/ports/science/axom/work/axom-0.6.1-1671-g88cac2607/src/axom/sidre/core/MFEMSidreDataCollection.cpp:19:
In file included from /wrkdirs/usr/ports/science/axom/work/axom-0.6.1-1671-g88cac2607/src/axom/sidre/core/MFEMSidreDataCollection.hpp:16:
In file included from /usr/local/include/mfem.hpp:2:
In file included from /usr/local/include/mfem/mfem.hpp:42:
In file included from /usr/local/include/mfem/linalg/linalg.hpp:21:
In file included from /usr/local/include/mfem/linalg/complex_operator.hpp:18:
In file included from /usr/local/include/mfem/linalg/hypre.hpp:25:
In file included from /usr/local/include/seq_mv.h:13:
In file included from /usr/local/include/HYPRE_seq_mv.h:17:
In file included from /usr/local/include/HYPRE_utilities.h:20:
/usr/local/include/mpi.h:370:5: error: expected identifier
MPI_WIN_SEPARATE = 1,
^
/usr/local/mpi/openmpi/include/mpi.h:575:38: note: expanded from macro 'MPI_WIN_SEPARATE'
#define MPI_WIN_SEPARATE 1
^
In file included from /wrkdirs/usr/ports/science/axom/work/axom-0.6.1-1671-g88cac2607/src/axom/sidre/core/MFEMSidreDataCollection.cpp:19:
In file included from /wrkdirs/usr/ports/science/axom/work/axom-0.6.1-1671-g88cac2607/src/axom/sidre/core/MFEMSidreDataCollection.hpp:16:
In file included from /usr/local/include/mfem.hpp:2:
In file included from /usr/local/include/mfem/mfem.hpp:42:
In file included from /usr/local/include/mfem/linalg/linalg.hpp:21:
In file included from /usr/local/include/mfem/linalg/complex_operator.hpp:18:
In file included from /usr/local/include/mfem/linalg/hypre.hpp:25:
In file included from /usr/local/include/seq_mv.h:13:
In file included from /usr/local/include/HYPRE_seq_mv.h:17:
In file included from /usr/local/include/HYPRE_utilities.h:20:
/usr/local/include/mpi.h:371:5: error: expected identifier
MPI_WIN_UNIFIED = 2
^
/usr/local/mpi/openmpi/include/mpi.h:574:38: note: expanded from macro 'MPI_WIN_UNIFIED'
#define MPI_WIN_UNIFIED 0
^
In file included from /wrkdirs/usr/ports/science/axom/work/axom-0.6.1-1671-g88cac2607/src/axom/sidre/core/MFEMSidreDataCollection.cpp:19:
In file included from /wrkdirs/usr/ports/science/axom/work/axom-0.6.1-1671-g88cac2607/src/axom/sidre/core/MFEMSidreDataCollection.hpp:16:
In file included from /usr/local/include/mfem.hpp:2:
In file included from /usr/local/include/mfem/mfem.hpp:42:
In file included from /usr/local/include/mfem/linalg/linalg.hpp:21:
In file included from /usr/local/include/mfem/linalg/complex_operator.hpp:18:
In file included from /usr/local/include/mfem/linalg/hypre.hpp:25:
In file included from /usr/local/include/seq_mv.h:13:
In file included from /usr/local/include/HYPRE_seq_mv.h:17:
In file included from /usr/local/include/HYPRE_utilities.h:20:
/usr/local/include/mpi.h:378:31: error: expected identifier
typedef enum MPIR_Topo_type { MPI_GRAPH=1, MPI_CART=2, MPI_DIST_GRAPH=3 } MPIR_Topo_type;
^
/usr/local/mpi/openmpi/include/mpi.h:509:32: note: expanded from macro 'MPI_GRAPH'
#define MPI_GRAPH 2 /* graph topology */
^
In file included from /wrkdirs/usr/ports/science/axom/work/axom-0.6.1-1671-g88cac2607/src/axom/sidre/core/MFEMSidreDataCollection.cpp:19:
In file included from /wrkdirs/usr/ports/science/axom/work/axom-0.6.1-1671-g88cac2607/src/axom/sidre/core/MFEMSidreDataCollection.hpp:16:
In file included from /usr/local/include/mfem.hpp:2:
In file included from /usr/local/include/mfem/mfem.hpp:42:
In file included from /usr/local/include/mfem/linalg/linalg.hpp:21:
In file included from /usr/local/include/mfem/linalg/complex_operator.hpp:18:
In file included from /usr/local/include/mfem/linalg/hypre.hpp:25:
In file included from /usr/local/include/seq_mv.h:13:
In file included from /usr/local/include/HYPRE_seq_mv.h:17:
In file included from /usr/local/include/HYPRE_utilities.h:20:
/usr/local/include/mpi.h:378:44: error: expected identifier
typedef enum MPIR_Topo_type { MPI_GRAPH=1, MPI_CART=2, MPI_DIST_GRAPH=3 } MPIR_Topo_type;
^
/usr/local/mpi/openmpi/include/mpi.h:508:32: note: expanded from macro 'MPI_CART'
#define MPI_CART 1 /* cartesian topology */
^
In file included from /wrkdirs/usr/ports/science/axom/work/axom-0.6.1-1671-g88cac2607/src/axom/sidre/core/MFEMSidreDataCollection.cpp:19:
In file included from /wrkdirs/usr/ports/science/axom/work/axom-0.6.1-1671-g88cac2607/src/axom/sidre/core/MFEMSidreDataCollection.hpp:16:
In file included from /usr/local/include/mfem.hpp:2:
In file included from /usr/local/include/mfem/mfem.hpp:42:
In file included from /usr/local/include/mfem/linalg/linalg.hpp:21:
In file included from /usr/local/include/mfem/linalg/complex_operator.hpp:18:
In file included from /usr/local/include/mfem/linalg/hypre.hpp:25:
In file included from /usr/local/include/seq_mv.h:13:
In file included from /usr/local/include/HYPRE_seq_mv.h:17:
In file included from /usr/local/include/HYPRE_utilities.h:20:
/usr/local/include/mpi.h:378:56: error: expected identifier
typedef enum MPIR_Topo_type { MPI_GRAPH=1, MPI_CART=2, MPI_DIST_GRAPH=3 } MPIR_Topo_type;
^
/usr/local/mpi/openmpi/include/mpi.h:507:32: note: expanded from macro 'MPI_DIST_GRAPH'
#define MPI_DIST_GRAPH 3 /* dist graph topology */
^
In file included from /wrkdirs/usr/ports/science/axom/work/axom-0.6.1-1671-g88cac2607/src/axom/sidre/core/MFEMSidreDataCollection.cpp:19:
In file included from /wrkdirs/usr/ports/science/axom/work/axom-0.6.1-1671-g88cac2607/src/axom/sidre/core/MFEMSidreDataCollection.hpp:16:
In file included from /usr/local/include/mfem.hpp:2:
In file included from /usr/local/include/mfem/mfem.hpp:42:
In file included from /usr/local/include/mfem/linalg/linalg.hpp:21:
In file included from /usr/local/include/mfem/linalg/complex_operator.hpp:18:
In file included from /usr/local/include/mfem/linalg/hypre.hpp:25:
In file included from /usr/local/include/seq_mv.h:13:
In file included from /usr/local/include/HYPRE_seq_mv.h:17:
In file included from /usr/local/include/HYPRE_utilities.h:20:
/usr/local/include/mpi.h:381:20: error: expected unqualified-id
extern int * const MPI_UNWEIGHTED MPICH_API_PUBLIC;
^
/usr/local/mpi/openmpi/include/mpi.h:515:36: note: expanded from macro 'MPI_UNWEIGHTED'
#define MPI_UNWEIGHTED ((int *) 2) /* unweighted graph */
^
In file included from /wrkdirs/usr/ports/science/axom/work/axom-0.6.1-1671-g88cac2607/src/axom/sidre/core/MFEMSidreDataCollection.cpp:19:
In file included from /wrkdirs/usr/ports/science/axom/work/axom-0.6.1-1671-g88cac2607/src/axom/sidre/core/MFEMSidreDataCollection.hpp:16:
In file included from /usr/local/include/mfem.hpp:2:
In file included from /usr/local/include/mfem/mfem.hpp:42:
In file included from /usr/local/include/mfem/linalg/linalg.hpp:21:
In file included from /usr/local/include/mfem/linalg/complex_operator.hpp:18:
In file included from /usr/local/include/mfem/linalg/hypre.hpp:25:
In file included from /usr/local/include/seq_mv.h:13:
In file included from /usr/local/include/HYPRE_seq_mv.h:17:
In file included from /usr/local/include/HYPRE_utilities.h:20:
/usr/local/include/mpi.h:381:20: error: expected ')'
/usr/local/mpi/openmpi/include/mpi.h:515:36: note: expanded from macro 'MPI_UNWEIGHTED'
#define MPI_UNWEIGHTED ((int *) 2) /* unweighted graph */
^
/usr/local/include/mpi.h:381:20: note: to match this '('
/usr/local/mpi/openmpi/include/mpi.h:515:35: note: expanded from macro 'MPI_UNWEIGHTED'
#define MPI_UNWEIGHTED ((int *) 2) /* unweighted graph */
^
In file included from /wrkdirs/usr/ports/science/axom/work/axom-0.6.1-1671-g88cac2607/src/axom/sidre/core/MFEMSidreDataCollection.cpp:19:
In file included from /wrkdirs/usr/ports/science/axom/work/axom-0.6.1-1671-g88cac2607/src/axom/sidre/core/MFEMSidreDataCollection.hpp:16:
In file included from /usr/local/include/mfem.hpp:2:
In file included from /usr/local/include/mfem/mfem.hpp:42:
In file included from /usr/local/include/mfem/linalg/linalg.hpp:21:
In file included from /usr/local/include/mfem/linalg/complex_operator.hpp:18:
In file included from /usr/local/include/mfem/linalg/hypre.hpp:25:
In file included from /usr/local/include/seq_mv.h:13:
In file included from /usr/local/include/HYPRE_seq_mv.h:17:
In file included from /usr/local/include/HYPRE_utilities.h:20:
/usr/local/include/mpi.h:381:20: error: expected ')'
extern int * const MPI_UNWEIGHTED MPICH_API_PUBLIC;
^
/usr/local/mpi/openmpi/include/mpi.h:515:43: note: expanded from macro 'MPI_UNWEIGHTED'
#define MPI_UNWEIGHTED ((int *) 2) /* unweighted graph */
^
/usr/local/include/mpi.h:381:20: note: to match this '('
/usr/local/mpi/openmpi/include/mpi.h:515:34: note: expanded from macro 'MPI_UNWEIGHTED'
#define MPI_UNWEIGHTED ((int *) 2) /* unweighted graph */
^
In file included from /wrkdirs/usr/ports/science/axom/work/axom-0.6.1-1671-g88cac2607/src/axom/sidre/core/MFEMSidreDataCollection.cpp:19:
In file included from /wrkdirs/usr/ports/science/axom/work/axom-0.6.1-1671-g88cac2607/src/axom/sidre/core/MFEMSidreDataCollection.hpp:16:
In file included from /usr/local/include/mfem.hpp:2:
In file included from /usr/local/include/mfem/mfem.hpp:42:
In file included from /usr/local/include/mfem/linalg/linalg.hpp:21:
In file included from /usr/local/include/mfem/linalg/complex_operator.hpp:18:
In file included from /usr/local/include/mfem/linalg/hypre.hpp:25:
In file included from /usr/local/include/seq_mv.h:13:
In file included from /usr/local/include/HYPRE_seq_mv.h:17:
In file included from /usr/local/include/HYPRE_utilities.h:20:
/usr/local/include/mpi.h:382:20: error: expected unqualified-id
extern int * const MPI_WEIGHTS_EMPTY MPICH_API_PUBLIC;
^
/usr/local/mpi/openmpi/include/mpi.h:516:36: note: expanded from macro 'MPI_WEIGHTS_EMPTY'
#define MPI_WEIGHTS_EMPTY ((int *) 3) /* empty weights */
^
fatal error: too many errors emitted, stopping now [-ferror-limit=]
20 errors generated.
[ 39% 35/89] /usr/bin/c++ -I/wrkdirs/usr/ports/science/axom/work/.build/include -I/wrkdirs/usr/ports/science/axom/work/axom-0.6.1-1671-g88cac2607/src/axom/core/../.. -isystem /wrkdirs/usr/ports/science/axom/work/axom-0.6.1-1671-g88cac2607/src/thirdparty -isystem /usr/local/mpi/openmpi/include -isystem /usr/local/include -isystem /usr/local/include/conduit -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -Wall -Wextra -fcolor-diagnostics -O2 -pipe -fstack-protector-strong -fno-strict-aliasing -fPIC -fexceptions -pthread -std=c++14 -MD -MT axom/sidre/CMakeFiles/sidre.dir/spio/IOManager.cpp.o -MF axom/sidre/CMakeFiles/sidre.dir/spio/IOManager.cpp.o.d -o axom/sidre/CMakeFiles/sidre.dir/spio/IOManager.cpp.o -c /wrkdirs/usr/ports/science/axom/work/axom-0.6.1-1671-g88cac2607/src/axom/sidre/spio/IOManager.cpp
ninja: build stopped: subcommand failed.
===> Compilation failed unexpectedly.
Try to set MAKE_JOBS_UNSAFE=yes and rebuild before reporting the failure to
the maintainer.
*** Error code 1
Stop.
make: stopped in /usr/ports/science/axom