[package - main-armv7-default][biology/kmcp] Failed for kmcp-0.8.2 in build
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Date: Thu, 18 Aug 2022 23:24:37 UTC
You are receiving this mail as a port that you maintain is failing to build on the FreeBSD package build server. Please investigate the failure and submit a PR to fix build. Maintainer: yuri@FreeBSD.org Log URL: http://ampere2.nyi.freebsd.org/data/main-armv7-default/p85ef7d020401_s0fd8d3589/logs/kmcp-0.8.2.log Build URL: http://ampere2.nyi.freebsd.org/build.html?mastername=main-armv7-default&build=p85ef7d020401_s0fd8d3589 Log: =>> Building biology/kmcp build started at Thu Aug 18 23:24:07 UTC 2022 port directory: /usr/ports/biology/kmcp package name: kmcp-0.8.2 building for: FreeBSD main-armv7-default-job-09 14.0-CURRENT FreeBSD 14.0-CURRENT 1400065 arm maintained by: yuri@FreeBSD.org Makefile ident: Poudriere version: 3.2.8-21-g883afb07 Host OSVERSION: 1400063 Jail OSVERSION: 1400065 Job Id: 09 !!! Jail is newer than host. (Jail: 1400065, Host: 1400063) !!! !!! This is not supported. !!! !!! Host kernel must be same or newer than jail. !!! !!! Expect build failures. !!! ---Begin Environment--- SHELL=/bin/sh OSVERSION=1400065 UNAME_v=FreeBSD 14.0-CURRENT 1400065 UNAME_r=14.0-CURRENT BLOCKSIZE=K MAIL=/var/mail/root MM_CHARSET=UTF-8 LANG=C.UTF-8 STATUS=1 HOME=/root PATH=/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin LOCALBASE=/usr/local USER=root LIBEXECPREFIX=/usr/local/libexec/poudriere POUDRIERE_VERSION=3.2.8-21-g883afb07 MASTERMNT=/usr/local/poudriere/data/.m/main-armv7-default/ref POUDRIERE_BUILD_TYPE=bulk PACKAGE_BUILDING=yes SAVED_TERM= PWD=/usr/local/poudriere/data/.m/main-armv7-default/ref/.p/pool P_PORTS_FEATURES=FLAVORS SELECTED_OPTIONS MASTERNAME=main-armv7-default SCRIPTPREFIX=/usr/local/share/poudriere OLDPWD=/usr/local/poudriere/data/.m/main-armv7-default/ref/.p SCRIPTPATH=/usr/local/share/poudriere/bulk.sh POUDRIEREPATH=/usr/local/bin/poudriere ---End Environment--- ---Begin Poudriere Port Flags/Env--- PORT_FLAGS= PKGENV= FLAVOR= DEPENDS_ARGS= MAKE_ARGS= ---End Poudriere Port Flags/Env--- ---Begin OPTIONS List--- ---End OPTIONS List--- --MAINTAINER-- yuri@FreeBSD.org --End MAINTAINER-- --CONFIGURE_ARGS-- --End CONFIGURE_ARGS-- --CONFIGURE_ENV-- XDG_DATA_HOME=/wrkdirs/usr/ports/biology/kmcp/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/kmcp/work XDG_CACHE_HOME=/wrkdirs/usr/ports/biology/kmcp/work/.cache HOME=/wrkdirs/usr/ports/biology/kmcp/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/biology/kmcp/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/biology/kmcp/work/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig SHELL=/bin/sh CONFIG_SHELL=/bin/sh --End CONFIGURE_ENV-- --MAKE_ENV-- XDG_DATA_HOME=/wrkdirs/usr/ports/biology/kmcp/work XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/kmcp/work XDG_CACHE_HOME=/wrkdirs/usr/ports/biology/kmcp/work/.cache HOME=/wrkdirs/usr/ports/biology/kmcp/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/biology/kmcp/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin PKG_CONFIG_LIBDIR=/wrkdirs/usr/ports/biology/kmcp/work/.pkgconfig:/usr/local/libdata/pkgconfig:/usr/local/share/pkgconfig:/usr/libdata/pkgconfig NO_PIE=yes MK_DEBUG_FILES=no MK_KERNEL_SYMBOLS=no SHELL=/bin/sh NO_LINT=YES PREFIX=/usr/local LOCALBASE=/usr/local CC="cc" CFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " CPP="cpp" CPPFLAGS="" LDFLAGS=" -fstack-protector-strong " LIBS="" CXX="c++" CXXFLAGS="-O2 -pipe -fstack-protector-strong -fno-strict-aliasing " MANPREFIX="/usr/local" BSD_INSTALL_PROGRAM="install -s -m 555" BSD_INSTALL_LIB="install -s -m 0644" BSD_INSTALL_SCRIPT="install -m 555" BSD_INSTALL_DATA="install -m 0644" BSD_INSTALL_MAN="install -m 444" --End MAKE_ENV-- --PLIST_SUB-- OSREL=14.0 PREFIX=%D LOCALBASE=/usr/local RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/kmcp" EXAMPLESDIR="share/examples/kmcp" DATADIR="share/kmcp" WWWDIR="www/kmcp" ETCDIR="etc/kmcp" --End PLIST_SUB-- --SUB_LIST-- PREFIX=/usr/local LOCALBASE=/usr/local DATADIR=/usr/local/share/kmcp DOCSDIR=/usr/local/share/doc/kmcp EXAMPLESDIR=/usr/local/share/examples/kmcp WWWDIR=/usr/local/www/kmcp ETCDIR=/usr/local/etc/kmcp --End SUB_LIST-- ---Begin make.conf--- USE_PACKAGE_DEPENDS=yes BATCH=yes WRKDIRPREFIX=/wrkdirs PORTSDIR=/usr/ports PACKAGES=/packages DISTDIR=/distfiles PACKAGE_BUILDING=yes PACKAGE_BUILDING_FLAVORS=yes #### /usr/local/etc/poudriere.d/make.conf #### # XXX: We really need this but cannot use it while 'make checksum' does not # try the next mirror on checksum failure. It currently retries the same # failed mirror and then fails rather then trying another. It *does* # try the next if the size is mismatched though. #MASTER_SITE_FREEBSD=yes # Build ALLOW_MAKE_JOBS_PACKAGES with 2 jobs MAKE_JOBS_NUMBER=2 #### /usr/ports/Mk/Scripts/ports_env.sh #### _CCVERSION_921dbbb2=FreeBSD clang version 14.0.5 (https://github.com/llvm/llvm-project.git llvmorg-14.0.5-0-gc12386ae247c) Target: armv7-unknown-freebsd14.0-gnueabihf Thread model: posix InstalledDir: /usr/bin _ALTCCVERSION_921dbbb2=none _CXXINTERNAL_acaad9ca=FreeBSD clang version 14.0.5 (https://github.com/llvm/llvm-project.git llvmorg-14.0.5-0-gc12386ae247c) Target: armv7-unknown-freebsd14.0-gnueabihf Thread model: posix InstalledDir: /usr/bin "/usr/bin/ld" "--eh-frame-hdr" "-dynamic-linker" "/libexec/ld-elf.so.1" "--hash-style=both" "--enable-new-dtags" "-o" "a.out" "/usr/lib/crt1.o" "/usr/lib/crti.o" "/usr/lib/crtbegin.o" "-L/usr/lib" "/dev/null" "-lc++" "-lm" "-lgcc" "--as-needed" "-lgcc_s" "--no-as-needed" "-lc" "-lgcc" "--as-needed" "-lgcc_s" "--no-as-needed" "/usr/lib/crtend.o" "/usr/lib/crtn.o" CC_OUTPUT_921dbbb2_58173849=yes CC_OUTPUT_921dbbb2_9bdba57c=yes CC_OUTPUT_921dbbb2_6a4fe7f5=yes CC_OUTPUT_921dbbb2_6bcac02b=yes CC_OUTPUT_921dbbb2_67d20829=yes CC_OUTPUT_921dbbb2_bfa62e83=yes CC_OUTPUT_921dbbb2_f0b4d593=yes CC_OUTPUT_921dbbb2_308abb44=yes CC_OUTPUT_921dbbb2_f00456e5=yes CC_OUTPUT_921dbbb2_65ad290d=yes CC_OUTPUT_921dbbb2_f2776b26=yes CC_OUTPUT_921dbbb2_b2657cc3=yes CC_OUTPUT_921dbbb2_380987f7=yes CC_OUTPUT_921dbbb2_160933ec=yes CC_OUTPUT_921dbbb2_fb62803b=yes _OBJC_CCVERSION_921dbbb2=FreeBSD clang version 14.0.5 (https://github.com/llvm/llvm-project.git llvmorg-14.0.5-0-gc12386ae247c) Target: armv7-unknown-freebsd14.0-gnueabihf Thread model: posix InstalledDir: /usr/bin _OBJC_ALTCCVERSION_921dbbb2=none ARCH=armv7 OPSYS=FreeBSD _OSRELEASE=14.0-CURRENT OSREL=14.0 OSVERSION=1400065 PYTHONBASE=/usr/local CONFIGURE_MAX_CMD_LEN=524288 HAVE_PORTS_ENV=1 #### Misc Poudriere #### GID=0 UID=0 ---End make.conf--- --Resource limits-- cpu time (seconds, -t) unlimited file size (512-blocks, -f) unlimited data seg size (kbytes, -d) 1048576 stack size (kbytes, -s) 1048576 core file size (512-blocks, -c) unlimited max memory size (kbytes, -m) unlimited locked memory (kbytes, -l) unlimited max user processes (-u) 89999 open files (-n) 1024 virtual mem size (kbytes, -v) unlimited swap limit (kbytes, -w) unlimited socket buffer size (bytes, -b) unlimited pseudo-terminals (-p) unlimited kqueues (-k) unlimited umtx shared locks (-o) unlimited --End resource limits-- =======================<phase: check-sanity >============================ ===> License MIT accepted by the user =========================================================================== =======================<phase: pkg-depends >============================ ===> kmcp-0.8.2 depends on file: /usr/local/sbin/pkg - not found ===> Installing existing package /packages/All/pkg-1.18.4.pkg [main-armv7-default-job-09] Installing pkg-1.18.4... [main-armv7-default-job-09] Extracting pkg-1.18.4: .......... done ===> kmcp-0.8.2 depends on file: /usr/local/sbin/pkg - found ===> Returning to build of kmcp-0.8.2 =========================================================================== =======================<phase: fetch-depends >============================ =========================================================================== =======================<phase: fetch >============================ ===> License MIT accepted by the user ===> Fetching all distfiles required by kmcp-0.8.2 for building =========================================================================== =======================<phase: checksum >============================ ===> License MIT accepted by the user ===> Fetching all distfiles required by kmcp-0.8.2 for building => SHA256 Checksum OK for shenwei356-kmcp-v0.8.2_GH0.tar.gz. => SHA256 Checksum OK for VividCortex-ewma-v1.1.1_GH0.tar.gz. => SHA256 Checksum OK for acarl005-stripansi-5a71ef0e047d_GH0.tar.gz. => SHA256 Checksum OK for clausecker-pospop-677120eb417c_GH0.tar.gz. => SHA256 Checksum OK for dustin-go-humanize-v1.0.0_GH0.tar.gz. => SHA256 Checksum OK for edsrzf-mmap-go-v1.1.0_GH0.tar.gz. => SHA256 Checksum OK for go-yaml-yaml-v2.4.0_GH0.tar.gz. => SHA256 Checksum OK for golang-sys-1d35b9e2eb4e_GH0.tar.gz. => SHA256 Checksum OK for grailbio-base-v0.0.10_GH0.tar.gz. => SHA256 Checksum OK for iafan-cwalk-586a8832a711_GH0.tar.gz. => SHA256 Checksum OK for inconshreveable-mousetrap-v1.0.0_GH0.tar.gz. => SHA256 Checksum OK for klauspost-compress-v1.15.0_GH0.tar.gz. => SHA256 Checksum OK for klauspost-pgzip-v1.2.5_GH0.tar.gz. => SHA256 Checksum OK for mattn-go-colorable-v0.1.12_GH0.tar.gz. => SHA256 Checksum OK for mattn-go-isatty-v0.0.14_GH0.tar.gz. => SHA256 Checksum OK for mattn-go-runewidth-v0.0.13_GH0.tar.gz. => SHA256 Checksum OK for mitchellh-go-homedir-v1.1.0_GH0.tar.gz. => SHA256 Checksum OK for pkg-errors-v0.9.1_GH0.tar.gz. => SHA256 Checksum OK for rivo-uniseg-v0.2.0_GH0.tar.gz. => SHA256 Checksum OK for shenwei356-bio-v0.7.0_GH0.tar.gz. => SHA256 Checksum OK for shenwei356-breader-v0.3.1_GH0.tar.gz. => SHA256 Checksum OK for shenwei356-go-logging-c6b9702d88ba_GH0.tar.gz. => SHA256 Checksum OK for shenwei356-kmers-v0.1.0_GH0.tar.gz. => SHA256 Checksum OK for shenwei356-natsort-600d539c017d_GH0.tar.gz. => SHA256 Checksum OK for shenwei356-pand-v0.0.5_GH0.tar.gz. => SHA256 Checksum OK for shenwei356-unik-v5.0.1_GH0.tar.gz. <snip> encoding container/list unicode/utf8 github.com/VividCortex/ewma internal/race golang.org/x/sys/internal/unsafeheader unicode/utf16 unicode crypto/internal/subtle math/bits sync/atomic vendor/golang.org/x/crypto/cryptobyte/asn1 internal/goos internal/itoa github.com/clausecker/pospop vendor/golang.org/x/crypto/internal/subtle crypto/subtle crypto/internal/boring/sig github.com/ulikunitz/xz/internal/hash internal/unsafeheader internal/nettrace github.com/shenwei356/pand internal/goarch internal/goexperiment internal/cpu # github.com/shenwei356/pand vendor/github.com/shenwei356/pand/dispatch.go:19:20: undefined: andInplaceFuncs vendor/github.com/shenwei356/pand/dispatch.go:29:20: undefined: andFuncs github.com/rivo/uniseg runtime/internal/math runtime/internal/sys internal/abi math runtime/internal/atomic internal/bytealg runtime github.com/shenwei356/util/math github.com/klauspost/compress github.com/vbauerster/mpb/v5/internal internal/reflectlite sync internal/testlog internal/singleflight math/rand runtime/cgo errors sort internal/oserror path io vendor/golang.org/x/net/dns/dnsmessage strconv crypto/internal/nistec/fiat syscall container/heap hash crypto/internal/randutil bytes strings hash/crc64 hash/crc32 crypto/rc4 crypto github.com/shenwei356/kmers vendor/golang.org/x/text/transform github.com/twotwotwo/sorts reflect bufio net/http/internal/ascii regexp/syntax github.com/shenwei356/util/stats github.com/twotwotwo/sorts/sortutil internal/syscall/execenv internal/syscall/unix time regexp github.com/acarl005/stripansi github.com/shenwei356/natsort context io/fs internal/poll crypto/internal/nistec os internal/fmtsort encoding/binary github.com/klauspost/compress/zstd/internal/xxhash encoding/base64 crypto/internal/edwards25519/field vendor/golang.org/x/crypto/internal/poly1305 github.com/zeebo/wyhash github.com/klauspost/compress/internal/snapref vendor/golang.org/x/crypto/curve25519/internal/field crypto/md5 github.com/zeebo/xxh3 crypto/cipher internal/godebug github.com/mattn/go-runewidth io/ioutil path/filepath fmt vendor/golang.org/x/net/route internal/intern encoding/pem crypto/internal/edwards25519 net/netip crypto/des crypto/internal/boring vendor/golang.org/x/crypto/chacha20 os/exec crypto/hmac crypto/sha256 crypto/sha512 crypto/aes crypto/sha1 vendor/golang.org/x/crypto/hkdf vendor/golang.org/x/crypto/chacha20poly1305 net github.com/mitchellh/go-homedir encoding/hex github.com/pkg/errors github.com/iafan/cwalk net/url github.com/ulikunitz/xz/internal/xlog github.com/shenwei356/util/byteutil log github.com/klauspost/compress/fse encoding/csv flag github.com/shenwei356/util/pathutil github.com/tatsushid/go-prettytable github.com/will-rowe/nthash vendor/golang.org/x/net/http2/hpack github.com/shenwei356/kmcp/kmcp/cmd/index vendor/golang.org/x/crypto/curve25519 github.com/shenwei356/util/bytesize compress/flate net/http/internal mime/quotedprintable github.com/shenwei356/unik/v5 os/user encoding/json text/template/parse mime runtime/debug golang.org/x/sys/unix math/big vendor/golang.org/x/text/unicode/norm github.com/vbauerster/mpb/v5/decor gopkg.in/yaml.v2 github.com/shenwei356/bio/seq vendor/golang.org/x/text/unicode/bidi github.com/shenwei356/util/stringutil github.com/ulikunitz/xz/lzma github.com/klauspost/compress/huff0 compress/gzip github.com/klauspost/compress/flate github.com/shenwei356/bio/sketches vendor/golang.org/x/text/secure/bidirule text/template github.com/ulikunitz/xz vendor/golang.org/x/net/idna github.com/edsrzf/mmap-go github.com/mattn/go-isatty github.com/vbauerster/mpb/v5/cwriter github.com/mattn/go-colorable github.com/vbauerster/mpb/v5 crypto/internal/boring/bbig crypto/elliptic encoding/asn1 github.com/dustin/go-humanize crypto/dsa crypto/rand github.com/klauspost/pgzip crypto/ed25519 github.com/klauspost/compress/zstd crypto/rsa crypto/x509/pkix vendor/golang.org/x/crypto/cryptobyte crypto/ecdsa log/syslog vendor/golang.org/x/net/http/httpproxy net/textproto crypto/x509 github.com/spf13/pflag github.com/shenwei356/go-logging vendor/golang.org/x/net/http/httpguts mime/multipart crypto/tls github.com/spf13/cobra net/http/httptrace net/http github.com/shenwei356/xopen github.com/shenwei356/breader github.com/shenwei356/bio/taxdump github.com/shenwei356/bio/seqio/fastx github.com/shenwei356/util/cliutil *** Error code 2 Stop. make: stopped in /usr/ports/biology/kmcp