[package - 130amd64-default][databases/py-tiledb] Failed for py38-tiledb-0.8.11 in configure

From: <pkg-fallout_at_FreeBSD.org>
Date: Thu, 21 Oct 2021 08:49:01 GMT
You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer:     sunpoet_at_FreeBSD.org
Log URL:        http://beefy16.nyi.freebsd.org/data/130amd64-default/f99dd971a4d9/logs/py38-tiledb-0.8.11.log
Build URL:      http://beefy16.nyi.freebsd.org/build.html?mastername=130amd64-default&build=f99dd971a4d9
Log:

=>> Building databases/py-tiledb
build started at Thu Oct 21 08:48:44 UTC 2021
port directory: /usr/ports/databases/py-tiledb
package name: py38-tiledb-0.8.11
building for: FreeBSD 130amd64-default-job-09 13.0-RELEASE-p4 FreeBSD 13.0-RELEASE-p4 amd64
maintained by: sunpoet_at_FreeBSD.org
Makefile ident: 
Poudriere version: 3.2.8-21-g883afb07
Host OSVERSION: 1400008
Jail OSVERSION: 1300139
Job Id: 09

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--MAINTAINER--
sunpoet_at_FreeBSD.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
PYTHON="/usr/local/bin/python3.8" XDG_DATA_HOME=/wrkdirs/usr/ports/databases/py-tiledb/work-py38  XDG_CONFIG_HOME=/wrkdirs/usr/ports/databases/py-tiledb/work-py38  XDG_CACHE_HOME=/wrkdirs/usr/ports/databases/py-tiledb/work-py38/.cache  HOME=/wrkdirs/usr/ports/databases/py-tiledb/work-py38 TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/databases/py-tiledb/work-py38/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin SHELL=/bin/sh CONFIG_SHELL=/bin/sh CMAKE_PREFIX_PATH="/usr/local"
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=======================<phase: check-sanity   >============================
===>  License MIT accepted by the user
===========================================================================
=======================<phase: pkg-depends    >============================
===>   py38-tiledb-0.8.11 depends on file: /usr/local/sbin/pkg - not found
===>   Installing existing package /packages/All/pkg-1.17.3.pkg
[130amd64-default-job-09] Installing pkg-1.17.3...
[130amd64-default-job-09] Extracting pkg-1.17.3: .......... done
===>   py38-tiledb-0.8.11 depends on file: /usr/local/sbin/pkg - found
===>   Returning to build of py38-tiledb-0.8.11
===========================================================================
=======================<phase: fetch-depends  >============================
===========================================================================
=======================<phase: fetch          >============================
===>  License MIT accepted by the user
===> Fetching all distfiles required by py38-tiledb-0.8.11 for building
===========================================================================
=======================<phase: checksum       >============================
===>  License MIT accepted by the user
===> Fetching all distfiles required by py38-tiledb-0.8.11 for building
=> SHA256 Checksum OK for tiledb-0.8.11.tar.gz.
===========================================================================
=======================<phase: extract-depends>============================
===========================================================================
=======================<phase: extract        >============================
===>  License MIT accepted by the user
===> Fetching all distfiles required by py38-tiledb-0.8.11 for building
===>  Extracting for py38-tiledb-0.8.11
=> SHA256 Checksum OK for tiledb-0.8.11.tar.gz.
===========================================================================
=======================<phase: patch-depends  >============================
===========================================================================
=======================<phase: patch          >============================
===>  Patching for py38-tiledb-0.8.11
===>  Applying FreeBSD patches for py38-tiledb-0.8.11 from /usr/ports/databases/py-tiledb/files
===========================================================================
=======================<phase: build-depends  >============================
===>   py38-tiledb-0.8.11 depends on package: py38-cython>=0.27 - not found
===>   Installing existing package /packages/All/py38-cython-0.29.24.pkg
[130amd64-default-job-09] Installing py38-cython-0.29.24...
[130amd64-default-job-09] `-- Installing py38-setuptools-57.0.0...
[130amd64-default-job-09] |   `-- Installing python38-3.8.12_1...
[130amd64-default-job-09] |   | `-- Installing gettext-runtime-0.21...
[130amd64-default-job-09] |   |   `-- Installing indexinfo-0.3.1...
[130amd64-default-job-09] |   |   `-- Extracting indexinfo-0.3.1: .... done
[130amd64-default-job-09] |   | `-- Extracting gettext-runtime-0.21: .......... done
[130amd64-default-job-09] |   | `-- Installing libffi-3.3_1...
[130amd64-default-job-09] |   | `-- Extracting libffi-3.3_1: .......... done
[130amd64-default-job-09] |   | `-- Installing mpdecimal-2.5.1...
[130amd64-default-job-09] |   | `-- Extracting mpdecimal-2.5.1: .......... done
[130amd64-default-job-09] |   | `-- Installing readline-8.1.1...
[130amd64-default-job-09] |   | `-- Extracting readline-8.1.1: .......... done
[130amd64-default-job-09] |   `-- Extracting python38-3.8.12_1: .......... done
[130amd64-default-job-09] `-- Extracting py38-setuptools-57.0.0: .......... done
[130amd64-default-job-09] Extracting py38-cython-0.29.24: .......... done
=====
Message from python38-3.8.12_1:

--
Note that some standard Python modules are provided as separate ports
as they require additional dependencies. They are available as:

py38-gdbm       databases/py-gdbm_at_py38
py38-sqlite3    databases/py-sqlite3_at_py38
py38-tkinter    x11-toolkits/py-tkinter_at_py38
===>   py38-tiledb-0.8.11 depends on package: py38-cython>=0.27 - found
===>   Returning to build of py38-tiledb-0.8.11
===>   py38-tiledb-0.8.11 depends on package: py38-pybind11>=2.6.2 - not found
===>   Installing existing package /packages/All/py38-pybind11-2.8.0.pkg
[130amd64-default-job-09] Installing py38-pybind11-2.8.0...
[130amd64-default-job-09] Extracting py38-pybind11-2.8.0: .......... done
===>   py38-tiledb-0.8.11 depends on package: py38-pybind11>=2.6.2 - found
===>   Returning to build of py38-tiledb-0.8.11
===>   py38-tiledb-0.8.11 depends on package: py38-setuptools_scm>=1.5.4 - not found
===>   Installing existing package /packages/All/py38-setuptools_scm-4.1.2_2.pkg
[130amd64-default-job-09] Installing py38-setuptools_scm-4.1.2_2...
[130amd64-default-job-09] `-- Installing py38-toml-0.10.2...
[130amd64-default-job-09] `-- Extracting py38-toml-0.10.2: .......... done
[130amd64-default-job-09] Extracting py38-setuptools_scm-4.1.2_2: .......... done
===>   py38-tiledb-0.8.11 depends on package: py38-setuptools_scm>=1.5.4 - found
===>   Returning to build of py38-tiledb-0.8.11
===>   py38-tiledb-0.8.11 depends on package: py38-numpy>=1.16,1 - not found
===>   Installing existing package /packages/All/py38-numpy-1.16.6_2,1.pkg
[130amd64-default-job-09] Installing py38-numpy-1.16.6_2,1...
[130amd64-default-job-09] `-- Installing gcc10-10.3.0...
[130amd64-default-job-09] |   `-- Installing binutils-2.37_1,1...
[130amd64-default-job-09] |   `-- Extracting binutils-2.37_1,1: .......... done
[130amd64-default-job-09] |   `-- Installing gmp-6.2.1...
[130amd64-default-job-09] |   `-- Extracting gmp-6.2.1: .......... done
[130amd64-default-job-09] |   `-- Installing mpc-1.2.1...
[130amd64-default-job-09] |   | `-- Installing mpfr-4.1.0_1...
[130amd64-default-job-09] |   | `-- Extracting mpfr-4.1.0_1: .......... done
[130amd64-default-job-09] |   `-- Extracting mpc-1.2.1: ......... done
[130amd64-default-job-09] `-- Extracting gcc10-10.3.0: .......... done
[130amd64-default-job-09] `-- Installing openblas-0.3.18,1...
[130amd64-default-job-09] `-- Extracting openblas-0.3.18,1: .......... done
[130amd64-default-job-09] `-- Installing suitesparse-umfpack-5.7.9...
[130amd64-default-job-09] |   `-- Installing metis-5.1.0_9...
[130amd64-default-job-09] |   `-- Extracting metis-5.1.0_9: .......... done
[130amd64-default-job-09] |   `-- Installing suitesparse-amd-2.4.6...
[130amd64-default-job-09] |   | `-- Installing suitesparse-config-5.10.1...
[130amd64-default-job-09] |   | `-- Extracting suitesparse-config-5.10.1: ......... done
[130amd64-default-job-09] |   `-- Extracting suitesparse-amd-2.4.6: .......... done
[130amd64-default-job-09] |   `-- Installing suitesparse-camd-2.4.6...
[130amd64-default-job-09] |   `-- Extracting suitesparse-camd-2.4.6: ......... done
[130amd64-default-job-09] |   `-- Installing suitesparse-ccolamd-2.9.6...
[130amd64-default-job-09] |   `-- Extracting suitesparse-ccolamd-2.9.6: ........ done
[130amd64-default-job-09] |   `-- Installing suitesparse-cholmod-3.0.14...
[130amd64-default-job-09] |   | `-- Installing suitesparse-colamd-2.9.6...
[130amd64-default-job-09] |   | `-- Extracting suitesparse-colamd-2.9.6: ........ done
[130amd64-default-job-09] |   `-- Extracting suitesparse-cholmod-3.0.14: .......... done
[130amd64-default-job-09] `-- Extracting suitesparse-umfpack-5.7.9: .......... done
[130amd64-default-job-09] Extracting py38-numpy-1.16.6_2,1: .......... done
=====
Message from gcc10-10.3.0:

--
To ensure binaries built with this toolchain find appropriate versions
of the necessary run-time libraries, you may want to link using

  -Wl,-rpath=/usr/local/lib/gcc10

For ports leveraging USE_GCC, USES=compiler, or USES=fortran this happens
transparently.
=====
Message from metis-5.1.0_9:

--
===>   NOTICE:

The metis port currently does not have a maintainer. As a result, it is
more likely to have unresolved issues, not be up-to-date, or even be removed in
the future. To volunteer to maintain this port, please create an issue at:

https://bugs.freebsd.org/bugzilla

More information about port maintainership is available at:

https://docs.freebsd.org/en/articles/contributing/#ports-contributing
===>   py38-tiledb-0.8.11 depends on package: py38-numpy>=1.16,1 - found
===>   Returning to build of py38-tiledb-0.8.11
===>   py38-tiledb-0.8.11 depends on package: tiledb>=2.2.8 - not found
===>   Installing existing package /packages/All/tiledb-2.4.0.pkg
[130amd64-default-job-09] Installing tiledb-2.4.0...
[130amd64-default-job-09] `-- Installing capnproto080-0.8.0...
[130amd64-default-job-09] `-- Extracting capnproto080-0.8.0: .......... done
[130amd64-default-job-09] `-- Installing catch-2.13.7...
[130amd64-default-job-09] `-- Extracting catch-2.13.7: .......... done
[130amd64-default-job-09] `-- Installing clipp-1.2.3...
[130amd64-default-job-09] `-- Extracting clipp-1.2.3: .... done
[130amd64-default-job-09] `-- Installing libfmt-8.0.1...
[130amd64-default-job-09] `-- Extracting libfmt-8.0.1: .......... done
[130amd64-default-job-09] `-- Installing liblz4-1.9.3,1...
[130amd64-default-job-09] `-- Extracting liblz4-1.9.3,1: .......... done
[130amd64-default-job-09] `-- Installing spdlog-1.9.2...
[130amd64-default-job-09] `-- Extracting spdlog-1.9.2: .......... done
[130amd64-default-job-09] `-- Installing zstd-1.5.0...
[130amd64-default-job-09] `-- Extracting zstd-1.5.0: .......... done
[130amd64-default-job-09] Extracting tiledb-2.4.0: .......... done
===>   py38-tiledb-0.8.11 depends on package: tiledb>=2.2.8 - found
===>   Returning to build of py38-tiledb-0.8.11
===>   py38-tiledb-0.8.11 depends on executable: cython-3.8 - found
===>   py38-tiledb-0.8.11 depends on package: py38-setuptools>0 - found
===>   py38-tiledb-0.8.11 depends on file: /usr/local/bin/python3.8 - found
===========================================================================
=======================<phase: lib-depends    >============================
===>   py38-tiledb-0.8.11 depends on shared library: libtiledb.so - found (/usr/local/lib/libtiledb.so)
===========================================================================
=======================<phase: configure      >============================
===>  Configuring for py38-tiledb-0.8.11
WARNING: The wheel package is not available.
/usr/local/bin/python3.8: No module named pip
Traceback (most recent call last):
  File "/usr/local/lib/python3.8/site-packages/setuptools/installer.py", line 75, in fetch_build_egg
    subprocess.check_call(cmd)
  File "/usr/local/lib/python3.8/subprocess.py", line 364, in check_call
    raise CalledProcessError(retcode, cmd)
subprocess.CalledProcessError: Command '['/usr/local/bin/python3.8', '-m', 'pip', '--disable-pip-version-check', 'wheel', '--no-deps', '-w', '/tmp/tmpkaojoc6z', '--quiet', 'cmake>=3.11.0']' returned non-zero exit status 1.

The above exception was the direct cause of the following exception:

Traceback (most recent call last):
  File "<string>", line 1, in <module>
  File "setup.py", line 666, in <module>
    setup(
  File "/usr/local/lib/python3.8/site-packages/setuptools/__init__.py", line 152, in setup
    _install_setup_requires(attrs)
  File "/usr/local/lib/python3.8/site-packages/setuptools/__init__.py", line 147, in _install_setup_requires
    dist.fetch_build_eggs(dist.setup_requires)
  File "/usr/local/lib/python3.8/site-packages/setuptools/dist.py", line 779, in fetch_build_eggs
    resolved_dists = pkg_resources.working_set.resolve(
  File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 766, in resolve
    dist = best[req.key] = env.best_match(
  File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 1051, in best_match
    return self.obtain(req, installer)
  File "/usr/local/lib/python3.8/site-packages/pkg_resources/__init__.py", line 1063, in obtain
    return installer(requirement)
  File "/usr/local/lib/python3.8/site-packages/setuptools/dist.py", line 838, in fetch_build_egg
    return fetch_build_egg(self, req)
  File "/usr/local/lib/python3.8/site-packages/setuptools/installer.py", line 77, in fetch_build_egg
    raise DistutilsError(str(e)) from e
distutils.errors.DistutilsError: Command '['/usr/local/bin/python3.8', '-m', 'pip', '--disable-pip-version-check', 'wheel', '--no-deps', '-w', '/tmp/tmpkaojoc6z', '--quiet', 'cmake>=3.11.0']' returned non-zero exit status 1.
setup.py sys.argv is:  ['setup.py', 'config']
TILEDB_PATH from env: ''
libtiledb_exists checking 'library_dirs': []
libtiledb_exists found: 'None'
*** Error code 1

Stop.
make: stopped in /usr/ports/databases/py-tiledb
Received on Thu Oct 21 2021 - 08:49:01 UTC

Original text of this message