git: 4c7b6443a487 - main - biology/seqan-apps: fix build

From: Yuri Victorovich <yuri_at_FreeBSD.org>
Date: Fri, 09 Oct 2026 03:00:15 UTC 
The branch main has been updated by yuri:

URL: https://cgit.FreeBSD.org/ports/commit/?id=4c7b6443a487189f0e498ec7c0c2c3d72fcfb327

commit 4c7b6443a487189f0e498ec7c0c2c3d72fcfb327
Author:     Yuri Victorovich <yuri@FreeBSD.org>
AuthorDate: 2026-10-09 02:33:48 +0000
Commit:     Yuri Victorovich <yuri@FreeBSD.org>
CommitDate: 2026-10-09 03:00:13 +0000

    biology/seqan-apps: fix build
    
    Reported by:    fallout
    Approved by:    portmgr@ (unbreak; blanket)
---
 biology/seqan-apps/files/patch-apps_ngs__roi_png__canvas.h | 13 +++++++++++++
 1 file changed, 13 insertions(+)

diff --git a/biology/seqan-apps/files/patch-apps_ngs__roi_png__canvas.h b/biology/seqan-apps/files/patch-apps_ngs__roi_png__canvas.h
new file mode 100644
index 000000000000..37bb607ed8be
--- /dev/null
+++ b/biology/seqan-apps/files/patch-apps_ngs__roi_png__canvas.h
@@ -0,0 +1,13 @@
+-- fix build with workaround for use of deprecated std::char_traits<unsigned char>
+
+--- apps/ngs_roi/png_canvas.h.orig	2026-10-09 02:29:45 UTC
++++ apps/ngs_roi/png_canvas.h
+@@ -152,7 +152,7 @@ struct PngIdatChunk
+ 
+ struct PngIdatChunk
+ {
+-    std::basic_string<unsigned char> data;
++    std::vector<unsigned char> data;
+ 
+     // Returns pointer to the payload.
+     unsigned char const * payload() const