From nobody Thu Mar 27 22:06:14 2025 X-Original-To: dev-commits-ports-main@mlmmj.nyi.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2610:1c1:1:606c::19:1]) by mlmmj.nyi.freebsd.org (Postfix) with ESMTP id 4ZNyRC5bffz5ryrJ; Thu, 27 Mar 2025 22:06:15 +0000 (UTC) (envelope-from git@FreeBSD.org) Received: from mxrelay.nyi.freebsd.org (mxrelay.nyi.freebsd.org [IPv6:2610:1c1:1:606c::19:3]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (4096 bits) server-digest SHA256 client-signature RSA-PSS (4096 bits) client-digest SHA256) (Client CN "mxrelay.nyi.freebsd.org", Issuer "R10" (verified OK)) by mx1.freebsd.org (Postfix) with ESMTPS id 4ZNyRB6npbz3ZHj; Thu, 27 Mar 2025 22:06:14 +0000 (UTC) (envelope-from git@FreeBSD.org) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=freebsd.org; s=dkim; t=1743113175; h=from:from:reply-to:subject:subject:date:date:message-id:message-id: to:to:cc:mime-version:mime-version:content-type:content-type: content-transfer-encoding:content-transfer-encoding; bh=P1SFiQpx/HCS1AbiLtULnRxC2dJXNvLOXC5l6FRVcC4=; b=HCgLZyyD/BxIpTE2XD6SgnrF9zD5vbyP9Pd/rePfe4pMycSVBBKXqr2YSc6AbZnRviWehH Dm+67gTSrU6b0aznHP6VAQ4//qUpLQY7a1ZAfY6tuCecf8AwB2I76/sLgyX8l/zD4L4cBD 9NexPu2fj/5/j19CjGWwJkqJurAr2z6dAkhIqeS1Sx6KdsT3MAjrKB74oceLGhDABWeL8T s+c8qYnlUZRV6yINgsdPzjH6kArBChPtKtk9mI3ZFD0yw1vnoAMEKVkCNzDhe3QKvSfzk4 tC0ixT4OaC5BA2J70oPmhrsKRWy6Fp0+Y0IcYsNRTn7MzlKX7z7Kmgv0d40cGA== ARC-Seal: i=1; s=dkim; d=freebsd.org; t=1743113175; a=rsa-sha256; cv=none; b=UQUoqP6dsJxY06JZPpRVYJ/xdcgQOU2U2ZBRJ4HUys6XKQvIFFrXI+h3+Kfko67WwQZHrB 67sm7qBVSuW6OC9MJPL23FqQvi5I1JHRCEPN2/IkwvdjB4Fw6zria94XFvoZ7Z2VGUr8su bKxvGKJknPbIZigTwVYc1gjok+rP0lbdA79NmYBhIb43nOHo+W7TOBXPRWYvkGVsJxdX17 OVoQZer8YqvIjnbir/zxD/BbI5THuKvqBYF4tqYVmwYmaaQEhkZtEgGdQ2IQzsuzeNDDPk k2cKrXxSot6zyKNxj4Q00UcdEZ7ZOrfiHL2hzrTRl/N863aocNpYKBdnHB9y2A== ARC-Authentication-Results: i=1; mx1.freebsd.org; none ARC-Message-Signature: i=1; a=rsa-sha256; c=relaxed/relaxed; d=freebsd.org; s=dkim; t=1743113175; h=from:from:reply-to:subject:subject:date:date:message-id:message-id: to:to:cc:mime-version:mime-version:content-type:content-type: content-transfer-encoding:content-transfer-encoding; bh=P1SFiQpx/HCS1AbiLtULnRxC2dJXNvLOXC5l6FRVcC4=; b=kYBAVCQ7XR6tTqSLS5ufH8fDIVHq08lUPgYZAdmEB6HA45nLVN6YBuEz0u3hODj2qwx9uz R5aJNaa5VxuPXTcs54MdAfOUq0z7f5X0PmgmuqIw7WjBD1skoATjvut8HTC75PWD8M9XmL QzdKrU0EK2RDNoPLIzUmtUYWmyQpXC5s+ppNMqPCyuUKbm9Tr4ibdWEkHYtMAaG7Rc7P3s yaMowoa4nfeTSxOZv6C+3Q6dBmzq4VDC4vUtUEOaEUpAPJWJ0lIeG+YSTkFwCpGsAQoqy1 hzVUeFXn7+QyGPKgiOcHKSSXhagqOoIXzyJ9mN2NheZNHGtNgsJDwXIUeUsDag== Received: from gitrepo.freebsd.org (gitrepo.freebsd.org [IPv6:2610:1c1:1:6068::e6a:5]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (4096 bits) server-digest SHA256) (Client did not present a certificate) by mxrelay.nyi.freebsd.org (Postfix) with ESMTPS id 4ZNyRB4KPQzmk; Thu, 27 Mar 2025 22:06:14 +0000 (UTC) (envelope-from git@FreeBSD.org) Received: from gitrepo.freebsd.org ([127.0.1.44]) by gitrepo.freebsd.org (8.18.1/8.18.1) with ESMTP id 52RM6Emh062455; Thu, 27 Mar 2025 22:06:14 GMT (envelope-from git@gitrepo.freebsd.org) Received: (from git@localhost) by gitrepo.freebsd.org (8.18.1/8.18.1/Submit) id 52RM6ECi062451; Thu, 27 Mar 2025 22:06:14 GMT (envelope-from git) Date: Thu, 27 Mar 2025 22:06:14 GMT Message-Id: <202503272206.52RM6ECi062451@gitrepo.freebsd.org> To: ports-committers@FreeBSD.org, dev-commits-ports-all@FreeBSD.org, dev-commits-ports-main@FreeBSD.org From: "Jason W. Bacon" Subject: git: 888c0b0e32d3 - main - biology/subread: Update to 2.1.0 List-Id: Commits to the main branch of the FreeBSD ports repository List-Archive: https://lists.freebsd.org/archives/dev-commits-ports-main List-Help: List-Post: List-Subscribe: List-Unsubscribe: X-BeenThere: dev-commits-ports-main@freebsd.org Sender: owner-dev-commits-ports-main@FreeBSD.org MIME-Version: 1.0 Content-Type: text/plain; charset=utf-8 Content-Transfer-Encoding: 8bit X-Git-Committer: jwb X-Git-Repository: ports X-Git-Refname: refs/heads/main X-Git-Reftype: branch X-Git-Commit: 888c0b0e32d35a9c64bcfeaef6b97c5ca5ab3729 Auto-Submitted: auto-generated The branch main has been updated by jwb: URL: https://cgit.FreeBSD.org/ports/commit/?id=888c0b0e32d35a9c64bcfeaef6b97c5ca5ab3729 commit 888c0b0e32d35a9c64bcfeaef6b97c5ca5ab3729 Author: Jason W. Bacon AuthorDate: 2025-03-27 22:05:26 +0000 Commit: Jason W. Bacon CommitDate: 2025-03-27 22:05:26 +0000 biology/subread: Update to 2.1.0 Improved identification and reporting of junctions in featureCounts Changes: https://subread.sourceforge.net/ --- biology/subread/Makefile | 2 +- biology/subread/distinfo | 6 +++--- 2 files changed, 4 insertions(+), 4 deletions(-) diff --git a/biology/subread/Makefile b/biology/subread/Makefile index e94ede742f9a..a1d05133fe3d 100644 --- a/biology/subread/Makefile +++ b/biology/subread/Makefile @@ -1,5 +1,5 @@ PORTNAME= subread -DISTVERSION= 2.0.8 +DISTVERSION= 2.1.0 DISTVERSIONSUFFIX= -source CATEGORIES= biology MASTER_SITES= SF/${PORTNAME}/${PORTNAME}-${PORTVERSION} diff --git a/biology/subread/distinfo b/biology/subread/distinfo index 7e6e9e5f7d23..5463062ccfa5 100644 --- a/biology/subread/distinfo +++ b/biology/subread/distinfo @@ -1,3 +1,3 @@ -TIMESTAMP = 1733935409 -SHA256 (subread-2.0.8-source.tar.gz) = cb5dadf71c850f128a8347223fe0ce19e1c17e3959e9f3eba90e8090671f8570 -SIZE (subread-2.0.8-source.tar.gz) = 26074498 +TIMESTAMP = 1743112595 +SHA256 (subread-2.1.0-source.tar.gz) = fdf8a84cf145edab4984070e71595612c97ad3741afdb8d25f93dae7c8703433 +SIZE (subread-2.1.0-source.tar.gz) = 26090041