git: 989b3863994b - main - biology/stacks: fix build without libomp
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Date: Wed, 22 Jan 2025 11:27:50 UTC
The branch main has been updated by pkubaj:
URL: https://cgit.FreeBSD.org/ports/commit/?id=989b3863994b82a4030031f940dfb3561d15c825
commit 989b3863994b82a4030031f940dfb3561d15c825
Author: Piotr Kubaj <pkubaj@FreeBSD.org>
AuthorDate: 2025-01-21 21:20:02 +0000
Commit: Piotr Kubaj <pkubaj@FreeBSD.org>
CommitDate: 2025-01-22 11:27:04 +0000
biology/stacks: fix build without libomp
src/process_radtags.cc:1578:6: error: unknown type name 'omp_lock_t'
1578 | omp_lock_t &thread_outbuf_lock = outbuf_lock[thread_index];
| ^
25 warnings and 10 errors generated.
---
biology/stacks/Makefile | 7 ++++++-
1 file changed, 6 insertions(+), 1 deletion(-)
diff --git a/biology/stacks/Makefile b/biology/stacks/Makefile
index 5e1b270e1b98..e0264aa59d58 100644
--- a/biology/stacks/Makefile
+++ b/biology/stacks/Makefile
@@ -10,7 +10,12 @@ WWW= https://catchenlab.life.illinois.edu/stacks/
LICENSE= GPLv2
LICENSE_FILE= ${WRKSRC}/LICENSE
-USES= compiler:c++11-lang gmake python shebangfix
+USES= gmake python shebangfix
+.if !exists(/usr/include/omp.h)
+USES+= compiler:gcc-c++11-lib
+.else
+USES+= compiler:c++11-lang
+.endif
SHEBANG_FILES= scripts/*