git: 041e3a8bc547 - main - biology/gatk: Fix build breakage after gradle update to 8.12.1

From: Yuri Victorovich <yuri_at_FreeBSD.org>
Date: Thu, 06 Feb 2025 15:05:52 UTC 
The branch main has been updated by yuri:

URL: https://cgit.FreeBSD.org/ports/commit/?id=041e3a8bc5470fd083f8d20801fe2877e2854cf5

commit 041e3a8bc5470fd083f8d20801fe2877e2854cf5
Author:     Yuri Victorovich <yuri@FreeBSD.org>
AuthorDate: 2025-02-06 08:46:13 +0000
Commit:     Yuri Victorovich <yuri@FreeBSD.org>
CommitDate: 2025-02-06 15:05:37 +0000

    biology/gatk: Fix build breakage after gradle update to 8.12.1
    
    Reported by:    fallout
---
 biology/gatk/Makefile | 6 +++---
 1 file changed, 3 insertions(+), 3 deletions(-)

diff --git a/biology/gatk/Makefile b/biology/gatk/Makefile
index 2bcf2b0647e3..7a69c6327be0 100644
--- a/biology/gatk/Makefile
+++ b/biology/gatk/Makefile
@@ -11,7 +11,7 @@ WWW=		https://gatk.broadinstitute.org/hc/en-us
 LICENSE=	BSD3CLAUSE
 LICENSE_FILE=	${WRKSRC}/LICENSE.TXT
 
-BUILD_DEPENDS=	gradle:devel/gradle
+BUILD_DEPENDS=	gradle8:devel/gradle8
 RUN_DEPENDS=	${LOCALBASE}/lib/libfml.so:biology/fermi-lite \
 		gkl>0:biology/gkl \
 		mummer>0:biology/mummer
@@ -106,7 +106,7 @@ post-extract: # need a separate extract step because the cache is in /tmp, and n
 .endif
 
 do-build:
-	@cd ${WRKSRC} && ${SETENV} ${MAKE_ENV} gradle \
+	@cd ${WRKSRC} && ${SETENV} ${MAKE_ENV} gradle8 \
 		--gradle-user-home ${DEPS_CACHE_DIR}/gradle-${PORTNAME} --project-cache-dir ${DEPS_CACHE_DIR}/gradle-${PORTNAME} \
 		${GRADLE_ARGS} --build-cache localJar
 
@@ -116,7 +116,7 @@ do-install:
 
 do-test: # tests require WITH_LARGE_FILES=ON, and they use a lot of disk space
 	@cd ${WRKSRC} && \
-		${SETENV} ${TEST_ENV} gradle -DLIBBWA_PATH=${PREFIX}/lib/libfml.so test
+		${SETENV} ${TEST_ENV} gradle8 -DLIBBWA_PATH=${PREFIX}/lib/libfml.so test
 
 # tests results as of version 4.6.1.0: 288552 tests, 301 failures, 37 ignored, 1h55m5.63s duration, 99% successful, see https://github.com/broadinstitute/gatk/issues/8940
 # see https://github.com/broadinstitute/gatk/issues/8939: Tests fail to find libgkl libraries in /usr/local/lib