git: b5fed385507c - main - biology/fastq-trim: Update to 0.1.4
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Date: Wed, 30 Apr 2025 11:11:43 UTC
The branch main has been updated by jwb:
URL: https://cgit.FreeBSD.org/ports/commit/?id=b5fed385507cb7921c4fb042c254c0c3cd56dcd4
commit b5fed385507cb7921c4fb042c254c0c3cd56dcd4
Author: Jason W. Bacon <jwb@FreeBSD.org>
AuthorDate: 2025-04-30 11:11:14 +0000
Commit: Jason W. Bacon <jwb@FreeBSD.org>
CommitDate: 2025-04-30 11:11:14 +0000
biology/fastq-trim: Update to 0.1.4
Add automatic 5' quality trimming
Changes: https://github.com/auerlab/fastq-trim/releases
---
biology/fastq-trim/Makefile | 11 ++++-------
biology/fastq-trim/distinfo | 6 +++---
2 files changed, 7 insertions(+), 10 deletions(-)
diff --git a/biology/fastq-trim/Makefile b/biology/fastq-trim/Makefile
index 1665ae11e1f1..37ca6af65f98 100644
--- a/biology/fastq-trim/Makefile
+++ b/biology/fastq-trim/Makefile
@@ -1,6 +1,5 @@
PORTNAME= fastq-trim
-DISTVERSION= 0.1.3
-PORTREVISION= 1
+DISTVERSION= 0.1.4
CATEGORIES= biology
MAINTAINER= jwb@FreeBSD.org
@@ -10,15 +9,13 @@ WWW= https://github.com/outpaddling/Fastq-trim
LICENSE= BSD2CLAUSE
LICENSE_FILE= ${WRKSRC}/LICENSE
-LIB_DEPENDS= libbiolibc.so:biology/biolibc libxtend.so:devel/libxtend
+BUILD_DEPENDS= biolibc>=0.2.6.10:biology/biolibc
+LIB_DEPENDS= libxtend.so:devel/libxtend libbiolibc.so:biology/biolibc
USE_GITHUB= yes
GH_ACCOUNT= outpaddling
-MAKE_ENV= VERSION=${PORTVERSION} MANPREFIX=${PREFIX}/share
-
-pre-build:
- (cd ${WRKSRC} && ${MAKE} LOCALBASE=${LOCALBASE} depend)
+MAKE_ARGS= MANPREFIX=${PREFIX}/share VERSION=${PORTVERSION}
.include <bsd.port.mk>
diff --git a/biology/fastq-trim/distinfo b/biology/fastq-trim/distinfo
index ab3a1f310215..e477fb4ea0e1 100644
--- a/biology/fastq-trim/distinfo
+++ b/biology/fastq-trim/distinfo
@@ -1,3 +1,3 @@
-TIMESTAMP = 1698152145
-SHA256 (outpaddling-fastq-trim-0.1.3_GH0.tar.gz) = ae40371ee7898308fef5eb20018bb5a8f5022e67307eccfac3d23084cdc0a093
-SIZE (outpaddling-fastq-trim-0.1.3_GH0.tar.gz) = 30596
+TIMESTAMP = 1745867331
+SHA256 (outpaddling-fastq-trim-0.1.4_GH0.tar.gz) = e31cdccdf0e68f68142917fffaceb9e814b3f217382c2e0f3663a6e1c7a13bb6
+SIZE (outpaddling-fastq-trim-0.1.4_GH0.tar.gz) = 29825