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Fri, 6 Dec 2024 02:11:42 GMT (envelope-from git) Date: Fri, 6 Dec 2024 02:11:42 GMT Message-Id: <202412060211.4B62Bgx0013190@gitrepo.freebsd.org> To: ports-committers@FreeBSD.org, dev-commits-ports-all@FreeBSD.org, dev-commits-ports-main@FreeBSD.org From: Yuri Victorovich Subject: git: ab0aca7ec7f7 - main - science/{,py-}rmf: update 1.6.1 =?utf-8?Q?=E2=86=92?= 1.7.0 List-Id: Commits to the main branch of the FreeBSD ports repository List-Archive: https://lists.freebsd.org/archives/dev-commits-ports-main List-Help: List-Post: List-Subscribe: List-Unsubscribe: X-BeenThere: dev-commits-ports-main@freebsd.org Sender: owner-dev-commits-ports-main@FreeBSD.org MIME-Version: 1.0 Content-Type: text/plain; charset=utf-8 Content-Transfer-Encoding: 8bit X-Git-Committer: yuri X-Git-Repository: ports X-Git-Refname: refs/heads/main X-Git-Reftype: branch X-Git-Commit: ab0aca7ec7f76456956ed15e79fdf09333aac8e6 Auto-Submitted: auto-generated The branch main has been updated by yuri: URL: https://cgit.FreeBSD.org/ports/commit/?id=ab0aca7ec7f76456956ed15e79fdf09333aac8e6 commit ab0aca7ec7f76456956ed15e79fdf09333aac8e6 Author: Yuri Victorovich AuthorDate: 2024-12-05 14:14:59 +0000 Commit: Yuri Victorovich CommitDate: 2024-12-06 02:11:36 +0000 science/{,py-}rmf: update 1.6.1 → 1.7.0 Reported by: portscout --- science/py-rmf/Makefile | 10 ++++++---- science/py-rmf/distinfo | 6 +++--- science/rmf/Makefile | 6 +++--- science/rmf/distinfo | 6 +++--- science/rmf/pkg-plist | 2 +- 5 files changed, 16 insertions(+), 14 deletions(-) diff --git a/science/py-rmf/Makefile b/science/py-rmf/Makefile index d79b131843e7..1d13d19df62c 100644 --- a/science/py-rmf/Makefile +++ b/science/py-rmf/Makefile @@ -1,11 +1,12 @@ PORTNAME= rmf -DISTVERSION= 1.6.1 +DISTVERSION= 1.7.0 CATEGORIES= science graphics PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX} MAINTAINER= yuri@FreeBSD.org COMMENT= Library to support reading and writing of Rich Molecular Format files -WWW= https://integrativemodeling.org/rmf/ +WWW= https://integrativemodeling.org/rmf/ \ + https://github.com/open-rmf/rmf LICENSE= APACHE20 LICENSE_FILE= ${WRKSRC}/COPYING @@ -27,10 +28,11 @@ LDFLAGS+= -lRMF BINARY_ALIAS= python=${PYTHON_CMD} -do-test: # one testcase fails: https://github.com/salilab/rmf/issues/126 +do-test: + # the IMP_MEDIUM_TIMEOUT setting below is to prevent RMF-medium_test_backwards.py from timeing out, see https://github.com/salilab/rmf/issues/126#issuecomment-825145818 @${RM} ${WRKSRC}/test/*.cpp @cd ${BUILD_WRKSRC} && \ - ${SETENV} ${CONFIGURE_ENV} ${CMAKE_BIN} ${CMAKE_ARGS} -DFREEBSD_BUILS_WITH_TESTS:BOOL=ON ${CMAKE_SOURCE_PATH} && \ + ${SETENV} ${CONFIGURE_ENV} ${CMAKE_BIN} ${CMAKE_ARGS} -DFREEBSD_BUILS_WITH_TESTS:BOOL=ON -DIMP_MEDIUM_TIMEOUT=1000000 ${CMAKE_SOURCE_PATH} && \ ${SETENV} ${MAKE_ENV} ${MAKE_CMD} ${MAKE_ARGS} ${ALL_TARGET} && \ ${SETENV} ${MAKE_ENV} ${MAKE_CMD} ${MAKE_ARGS} test diff --git a/science/py-rmf/distinfo b/science/py-rmf/distinfo index 66e2f5ebdf76..12befb80dc94 100644 --- a/science/py-rmf/distinfo +++ b/science/py-rmf/distinfo @@ -1,3 +1,3 @@ -TIMESTAMP = 1716605218 -SHA256 (salilab-rmf-1.6.1_GH0.tar.gz) = abe143e7411b910e5ba863c162b3a23bfdec440cbb1c4909e88727c0e63ad772 -SIZE (salilab-rmf-1.6.1_GH0.tar.gz) = 15105898 +TIMESTAMP = 1733424482 +SHA256 (salilab-rmf-1.7.0_GH0.tar.gz) = 37997f189702b4705f69b2db5f64cef31cfa9ab9eb151dfc0457c72dba422345 +SIZE (salilab-rmf-1.7.0_GH0.tar.gz) = 15100498 diff --git a/science/rmf/Makefile b/science/rmf/Makefile index 39e1a1543476..0370afc69e22 100644 --- a/science/rmf/Makefile +++ b/science/rmf/Makefile @@ -1,11 +1,11 @@ PORTNAME= rmf -DISTVERSION= 1.6.1 -PORTREVISION= 2 +DISTVERSION= 1.7.0 CATEGORIES= science graphics MAINTAINER= yuri@FreeBSD.org COMMENT= Library to support reading and writing of Rich Molecular Format files -WWW= https://integrativemodeling.org/rmf/ +WWW= https://integrativemodeling.org/rmf/ \ + https://github.com/open-rmf/rmf LICENSE= APACHE20 LICENSE_FILE= ${WRKSRC}/COPYING diff --git a/science/rmf/distinfo b/science/rmf/distinfo index 267f5db331e3..099386120e97 100644 --- a/science/rmf/distinfo +++ b/science/rmf/distinfo @@ -1,3 +1,3 @@ -TIMESTAMP = 1716603187 -SHA256 (salilab-rmf-1.6.1_GH0.tar.gz) = abe143e7411b910e5ba863c162b3a23bfdec440cbb1c4909e88727c0e63ad772 -SIZE (salilab-rmf-1.6.1_GH0.tar.gz) = 15105898 +TIMESTAMP = 1733424309 +SHA256 (salilab-rmf-1.7.0_GH0.tar.gz) = 37997f189702b4705f69b2db5f64cef31cfa9ab9eb151dfc0457c72dba422345 +SIZE (salilab-rmf-1.7.0_GH0.tar.gz) = 15100498 diff --git a/science/rmf/pkg-plist b/science/rmf/pkg-plist index aa3dbe54806f..0572d10c88c5 100644 --- a/science/rmf/pkg-plist +++ b/science/rmf/pkg-plist @@ -99,4 +99,4 @@ include/RMF/types.h include/RMF/utility.h include/RMF/validate.h lib/libRMF.so -lib/libRMF.so.1.6 +lib/libRMF.so.1.7