git: ab0aca7ec7f7 - main - science/{,py-}rmf: update 1.6.1 → 1.7.0

From: Yuri Victorovich <yuri_at_FreeBSD.org>
Date: Fri, 06 Dec 2024 02:11:42 UTC
The branch main has been updated by yuri:

URL: https://cgit.FreeBSD.org/ports/commit/?id=ab0aca7ec7f76456956ed15e79fdf09333aac8e6

commit ab0aca7ec7f76456956ed15e79fdf09333aac8e6
Author:     Yuri Victorovich <yuri@FreeBSD.org>
AuthorDate: 2024-12-05 14:14:59 +0000
Commit:     Yuri Victorovich <yuri@FreeBSD.org>
CommitDate: 2024-12-06 02:11:36 +0000

    science/{,py-}rmf: update 1.6.1 → 1.7.0
    
    Reported by:    portscout
---
 science/py-rmf/Makefile | 10 ++++++----
 science/py-rmf/distinfo |  6 +++---
 science/rmf/Makefile    |  6 +++---
 science/rmf/distinfo    |  6 +++---
 science/rmf/pkg-plist   |  2 +-
 5 files changed, 16 insertions(+), 14 deletions(-)

diff --git a/science/py-rmf/Makefile b/science/py-rmf/Makefile
index d79b131843e7..1d13d19df62c 100644
--- a/science/py-rmf/Makefile
+++ b/science/py-rmf/Makefile
@@ -1,11 +1,12 @@
 PORTNAME=	rmf
-DISTVERSION=	1.6.1
+DISTVERSION=	1.7.0
 CATEGORIES=	science graphics
 PKGNAMEPREFIX=	${PYTHON_PKGNAMEPREFIX}
 
 MAINTAINER=	yuri@FreeBSD.org
 COMMENT=	Library to support reading and writing of Rich Molecular Format files
-WWW=		https://integrativemodeling.org/rmf/
+WWW=		https://integrativemodeling.org/rmf/ \
+		https://github.com/open-rmf/rmf
 
 LICENSE=	APACHE20
 LICENSE_FILE=	${WRKSRC}/COPYING
@@ -27,10 +28,11 @@ LDFLAGS+=	-lRMF
 
 BINARY_ALIAS=	python=${PYTHON_CMD}
 
-do-test: # one testcase fails: https://github.com/salilab/rmf/issues/126
+do-test:
+	# the IMP_MEDIUM_TIMEOUT setting below is to prevent RMF-medium_test_backwards.py from timeing out, see https://github.com/salilab/rmf/issues/126#issuecomment-825145818
 	@${RM} ${WRKSRC}/test/*.cpp
 	@cd ${BUILD_WRKSRC} && \
-		${SETENV} ${CONFIGURE_ENV} ${CMAKE_BIN} ${CMAKE_ARGS} -DFREEBSD_BUILS_WITH_TESTS:BOOL=ON ${CMAKE_SOURCE_PATH} && \
+		${SETENV} ${CONFIGURE_ENV} ${CMAKE_BIN} ${CMAKE_ARGS} -DFREEBSD_BUILS_WITH_TESTS:BOOL=ON -DIMP_MEDIUM_TIMEOUT=1000000 ${CMAKE_SOURCE_PATH} && \
 		${SETENV} ${MAKE_ENV} ${MAKE_CMD} ${MAKE_ARGS} ${ALL_TARGET} && \
 		${SETENV} ${MAKE_ENV} ${MAKE_CMD} ${MAKE_ARGS} test
 
diff --git a/science/py-rmf/distinfo b/science/py-rmf/distinfo
index 66e2f5ebdf76..12befb80dc94 100644
--- a/science/py-rmf/distinfo
+++ b/science/py-rmf/distinfo
@@ -1,3 +1,3 @@
-TIMESTAMP = 1716605218
-SHA256 (salilab-rmf-1.6.1_GH0.tar.gz) = abe143e7411b910e5ba863c162b3a23bfdec440cbb1c4909e88727c0e63ad772
-SIZE (salilab-rmf-1.6.1_GH0.tar.gz) = 15105898
+TIMESTAMP = 1733424482
+SHA256 (salilab-rmf-1.7.0_GH0.tar.gz) = 37997f189702b4705f69b2db5f64cef31cfa9ab9eb151dfc0457c72dba422345
+SIZE (salilab-rmf-1.7.0_GH0.tar.gz) = 15100498
diff --git a/science/rmf/Makefile b/science/rmf/Makefile
index 39e1a1543476..0370afc69e22 100644
--- a/science/rmf/Makefile
+++ b/science/rmf/Makefile
@@ -1,11 +1,11 @@
 PORTNAME=	rmf
-DISTVERSION=	1.6.1
-PORTREVISION=	2
+DISTVERSION=	1.7.0
 CATEGORIES=	science graphics
 
 MAINTAINER=	yuri@FreeBSD.org
 COMMENT=	Library to support reading and writing of Rich Molecular Format files
-WWW=		https://integrativemodeling.org/rmf/
+WWW=		https://integrativemodeling.org/rmf/ \
+		https://github.com/open-rmf/rmf
 
 LICENSE=	APACHE20
 LICENSE_FILE=	${WRKSRC}/COPYING
diff --git a/science/rmf/distinfo b/science/rmf/distinfo
index 267f5db331e3..099386120e97 100644
--- a/science/rmf/distinfo
+++ b/science/rmf/distinfo
@@ -1,3 +1,3 @@
-TIMESTAMP = 1716603187
-SHA256 (salilab-rmf-1.6.1_GH0.tar.gz) = abe143e7411b910e5ba863c162b3a23bfdec440cbb1c4909e88727c0e63ad772
-SIZE (salilab-rmf-1.6.1_GH0.tar.gz) = 15105898
+TIMESTAMP = 1733424309
+SHA256 (salilab-rmf-1.7.0_GH0.tar.gz) = 37997f189702b4705f69b2db5f64cef31cfa9ab9eb151dfc0457c72dba422345
+SIZE (salilab-rmf-1.7.0_GH0.tar.gz) = 15100498
diff --git a/science/rmf/pkg-plist b/science/rmf/pkg-plist
index aa3dbe54806f..0572d10c88c5 100644
--- a/science/rmf/pkg-plist
+++ b/science/rmf/pkg-plist
@@ -99,4 +99,4 @@ include/RMF/types.h
 include/RMF/utility.h
 include/RMF/validate.h
 lib/libRMF.so
-lib/libRMF.so.1.6
+lib/libRMF.so.1.7