git: eb340a643efc - main - biology/wfa2-lib: Unbreak build on aarch64, probably others

From: Jason W. Bacon <jwb_at_FreeBSD.org>
Date: Tue, 31 Jan 2023 15:19:36 UTC 
The branch main has been updated by jwb:

URL: https://cgit.FreeBSD.org/ports/commit/?id=eb340a643efc7a5d40858fb9abc059bb9face05c

commit eb340a643efc7a5d40858fb9abc059bb9face05c
Author:     Jason W. Bacon <jwb@FreeBSD.org>
AuthorDate: 2023-01-31 15:17:52 +0000
Commit:     Jason W. Bacon <jwb@FreeBSD.org>
CommitDate: 2023-01-31 15:17:52 +0000

    biology/wfa2-lib: Unbreak build on aarch64, probably others
    
    Patch out hard-coded -march=native, not supported by clang aarch64
    
    Reported by:    pkg-fallout
---
 biology/wfa2-lib/Makefile                   |  1 +
 biology/wfa2-lib/files/patch-CMakeLists.txt | 11 +++++++++++
 2 files changed, 12 insertions(+)

diff --git a/biology/wfa2-lib/Makefile b/biology/wfa2-lib/Makefile
index cb334b9bf0c3..2300f379ec6f 100644
--- a/biology/wfa2-lib/Makefile
+++ b/biology/wfa2-lib/Makefile
@@ -1,6 +1,7 @@
 PORTNAME=		wfa2-lib
 DISTVERSIONPREFIX=	v
 DISTVERSION=		2.3.2
+PORTREVISION=		1
 CATEGORIES=		biology
 
 MAINTAINER=	jwb@FreeBSD.org
diff --git a/biology/wfa2-lib/files/patch-CMakeLists.txt b/biology/wfa2-lib/files/patch-CMakeLists.txt
new file mode 100644
index 000000000000..8b71ad656f0a
--- /dev/null
+++ b/biology/wfa2-lib/files/patch-CMakeLists.txt
@@ -0,0 +1,11 @@
+--- CMakeLists.txt.orig	2023-01-31 15:02:27 UTC
++++ CMakeLists.txt
+@@ -55,7 +55,7 @@ if(NOT CMAKE_BUILD_TYPE)
+ endif()
+ 
+ if (${CMAKE_BUILD_TYPE} MATCHES Release)
+-  set(OPTIMIZE_FLAGS "${OPTIMIZE_FLAGS} -march=native -D_FILE_OFFSET_BITS=64")
++  set(OPTIMIZE_FLAGS "${OPTIMIZE_FLAGS} -D_FILE_OFFSET_BITS=64")
+ endif()
+ 
+ if ((${CMAKE_BUILD_TYPE} MATCHES Release) OR (${CMAKE_BUILD_TYPE} MATCHES RelWithDebInfo))