git: 620c4e1cad51 - main - biology/gatk: update 4.4.0.0 → 4.5.0.0
- Go to: [ bottom of page ] [ top of archives ] [ this month ]
Date: Mon, 18 Dec 2023 09:14:20 UTC
The branch main has been updated by yuri:
URL: https://cgit.FreeBSD.org/ports/commit/?id=620c4e1cad51cfff5d8ebb4b2dafc88d2ede16fd
commit 620c4e1cad51cfff5d8ebb4b2dafc88d2ede16fd
Author: Yuri Victorovich <yuri@FreeBSD.org>
AuthorDate: 2023-12-18 09:13:53 +0000
Commit: Yuri Victorovich <yuri@FreeBSD.org>
CommitDate: 2023-12-18 09:14:18 +0000
biology/gatk: update 4.4.0.0 → 4.5.0.0
ChangeLog: https://github.com/broadinstitute/gatk/releases/tag/4.5.0.0
---
biology/gatk/Makefile | 6 +++---
biology/gatk/distinfo | 10 +++++-----
2 files changed, 8 insertions(+), 8 deletions(-)
diff --git a/biology/gatk/Makefile b/biology/gatk/Makefile
index daf9eb32ae98..4449c3005f90 100644
--- a/biology/gatk/Makefile
+++ b/biology/gatk/Makefile
@@ -1,5 +1,5 @@
PORTNAME= gatk
-DISTVERSION= 4.4.0.0
+DISTVERSION= 4.5.0.0
CATEGORIES= biology java
EXTRACT_ONLY= ${DISTNAME}${EXTRACT_SUFX}
@@ -12,7 +12,7 @@ LICENSE_FILE= ${WRKSRC}/LICENSE.TXT
BROKEN_FreeBSD_12_powerpc64= fails to build: String index out of range: -1
-BUILD_DEPENDS= gradle761:devel/gradle761
+BUILD_DEPENDS= gradle:devel/gradle
USES= gettext-runtime
USE_JAVA= yes
@@ -88,7 +88,7 @@ post-extract: # need a separate extract step because the cache is in /tmp, and n
.endif
do-build:
- cd ${WRKSRC} && ${SETENV} ${MAKE_ENV} gradle761 \
+ cd ${WRKSRC} && ${SETENV} ${MAKE_ENV} gradle \
--gradle-user-home ${DEPS_CACHE_DIR}/gradle-${PORTNAME} --project-cache-dir ${DEPS_CACHE_DIR}/gradle-${PORTNAME} \
${GRADLE_ARGS} --build-cache localJar
diff --git a/biology/gatk/distinfo b/biology/gatk/distinfo
index 2c162723ff0d..7efe8cb7a921 100644
--- a/biology/gatk/distinfo
+++ b/biology/gatk/distinfo
@@ -1,5 +1,5 @@
-TIMESTAMP = 1685914727
-SHA256 (gatk-4.4.0.0-deps.tar.gz) = 1122d2c0d79048b3a2c507262a76af98b1f1c6e9e70c6d459f458fa33939a58c
-SIZE (gatk-4.4.0.0-deps.tar.gz) = 717202736
-SHA256 (broadinstitute-gatk-4.4.0.0_GH0.tar.gz) = 026498bdb1e07041abc74e26c84e681d77212a3d3dd66c83249957a0518e4bfe
-SIZE (broadinstitute-gatk-4.4.0.0_GH0.tar.gz) = 100594033
+TIMESTAMP = 1702890353
+SHA256 (gatk-4.5.0.0-deps.tar.gz) = b6bf2e6ff9d64198e4ba185b2c09648bef841d274206603d0f6802e134b10cf5
+SIZE (gatk-4.5.0.0-deps.tar.gz) = 883487836
+SHA256 (broadinstitute-gatk-4.5.0.0_GH0.tar.gz) = 39b09548ada317b29f19d6cbc0267301ee3565d575a5d79008a0168e679b98d2
+SIZE (broadinstitute-gatk-4.5.0.0_GH0.tar.gz) = 104455420