git: 4994c452468c - main - science/abinit: temporary switch to OpenMPI
- Go to: [ bottom of page ] [ top of archives ] [ this month ]
Date: Mon, 04 Dec 2023 18:38:19 UTC
The branch main has been updated by thierry:
URL: https://cgit.FreeBSD.org/ports/commit/?id=4994c452468c33a19d0a3cf1c828528796da0ac7
commit 4994c452468c33a19d0a3cf1c828528796da0ac7
Author: Thierry Thomas <thierry@FreeBSD.org>
AuthorDate: 2023-12-02 17:12:11 +0000
Commit: Thierry Thomas <thierry@FreeBSD.org>
CommitDate: 2023-12-04 18:36:58 +0000
science/abinit: temporary switch to OpenMPI
Waiting for the error with MPICH-4 to be fixed.
Cf. <https://github.com/abinit/abinit/issues/61>.
PR: 275485
Approved by: yuri (maintainer)
---
science/abinit/Makefile | 31 ++++++++++++++++++++-----------
1 file changed, 20 insertions(+), 11 deletions(-)
diff --git a/science/abinit/Makefile b/science/abinit/Makefile
index 3271dd86d91b..809b842f47e6 100644
--- a/science/abinit/Makefile
+++ b/science/abinit/Makefile
@@ -1,5 +1,6 @@
PORTNAME= abinit
DISTVERSION= 9.10.3
+PORTREVISION= 1
CATEGORIES= science
MAINTAINER= yuri@FreeBSD.org
@@ -18,7 +19,6 @@ BUILD_DEPENDS= gm4:devel/m4 \
${PYTHON_PKGNAMEPREFIX}graphviz>0:graphics/py-graphviz@${PY_FLAVOR}
LIB_DEPENDS= libelpa.so:math/elpa \
libsz.so:science/libaec \
- libelpa.so:math/elpa \
libxc.so:science/libxc \
libfftw3.so:math/fftw3 \
libhdf5.so:science/hdf5 \
@@ -38,8 +38,7 @@ USE_GNOME= libxml2
SHEBANG_FILES= config/scripts/* doc/tutorial/paral_bandpw_assets/abinit.sub.*
SHEBANG_GLOB= *.py
GNU_CONFIGURE= yes
-CONFIGURE_ENV= CC_LDFLAGS="${LDFLAGS}" CXX_LDFLAGS="${LDFLAGS}" FC_LDFLAGS="${LDFLAGS}" \
- H5CC="${LOCALBASE}/bin/h5cc" \
+CONFIGURE_ENV= H5CC="${LOCALBASE}/bin/h5cc" \
HDF5_CFLAGS="-I${LOCALBASE}/include" \
HDF5_LDFLAGS="-L${LOCALBASE}/lib -lhdf5" \
LINALG_FCFLAGS="-I${LOCALBASE}/include/elpa-2019.05.002/modules" \
@@ -54,19 +53,29 @@ TEST_TARGET= tests_abirules tests_buildsys # Many tests print RuntimeError, http
TEST_WRKSRC= ${WRKSRC}/abichecks
PORTDOCS= *
-OPTIONS_DEFINE= DOCS OPENMP MPI
-OPTIONS_DEFAULT= OPENMP MPI
+OPTIONS_DEFINE= DOCS OPENMP OPENMPI
+OPTIONS_DEFAULT= OPENMP OPENMPI
OPENMP_CONFIGURE_ENABLE= openmp
OPENMP_LDFLAGS= -lomp
-MPI_CONFIGURE_WITH= mpi=yes
+OPENMPI_CONFIGURE_WITH= mpi=yes
+# BROKEN with MPICH4: see <https://github.com/abinit/abinit/issues/61>
+# To set back to mpich when this issue will be fixed.
+OPENMPI_USES= mpi:openmpi
# fftw3 not enabled because libfftw3_mpi is required but not packaged
-MPI_VARS= FFLAGS+=-I${LOCALBASE}/include FCFLAGS+=-I${LOCALBASE}/include \
- CONFIGURE_ENV+=MPI_LIBS="`pkg-config --libs mpich` -lmpifort" \
- CONFIGURE_ENV+MPI_LDFLAGS="`pkg-config --libs mpich` -lmpifort"
-MPI_BUILD_DEPENDS= mpich>0:net/mpich
-MPI_RUN_DEPENDS= mpich>0:net/mpich
+OPENMPI_VARS= FCFLAGS+="`pkg-config --cflags ompi-fort`"
+OPENMPI_CONFIGURE_ENV= CC_LDFLAGS="${MPI_LIBS} ${LDFLAGS}" \
+ CXX_LDFLAGS="${MPI_LIBS} ${LDFLAGS}" \
+ FC_LDFLAGS="${MPI_LIBS} ${LDFLAGS}" \
+ CFLAGS="${MPI_CFLAGS} ${CFLAGS} ${CFLAGS_F2018}" \
+ MPI_CPPFLAGS="${MPI_CFLAGS}" \
+ MPI_FCFLAGS="`pkg-config --cflags ompi-fort`" \
+ MPI_LIBS="${MPI_LIBS}" \
+ MPI_LDFLAGS="${MPI_LIBS}"
+# When OpenMPI is enabled, put its related variables 1st to avoid conflicts with MPICH
+OPENMPI_CONFIGURE_ENV_OFF= CC_LDFLAGS="${LDFLAGS}" CXX_LDFLAGS="${LDFLAGS}" \
+ FC_LDFLAGS="${LDFLAGS}" CFLAGS="${CFLAGS}"
.if defined(WITH_LEVMAR)
# --with-levmar seems deprecated