git: a22e465fa876 - main - science/py-hoomd-blue: Update 3.0.0-beta.14 -> 3.0.0

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From: Yuri Victorovich <yuri_at_FreeBSD.org>
Date: Thu, 24 Mar 2022 16:35:13 UTC
The branch main has been updated by yuri:

URL: https://cgit.FreeBSD.org/ports/commit/?id=a22e465fa876b1d2cae27c7cd37e0653300462e1

commit a22e465fa876b1d2cae27c7cd37e0653300462e1
Author:     Yuri Victorovich <yuri@FreeBSD.org>
AuthorDate: 2022-03-24 16:28:11 +0000
Commit:     Yuri Victorovich <yuri@FreeBSD.org>
CommitDate: 2022-03-24 16:35:05 +0000

    science/py-hoomd-blue: Update 3.0.0-beta.14 -> 3.0.0
    
    Reported by:    portscout
---
 science/py-hoomd-blue/Makefile  |  6 ++---
 science/py-hoomd-blue/distinfo  | 10 ++++----
 science/py-hoomd-blue/pkg-plist | 56 +++++++++++++++++++++++------------------
 3 files changed, 39 insertions(+), 33 deletions(-)

diff --git a/science/py-hoomd-blue/Makefile b/science/py-hoomd-blue/Makefile
index 8002611b61ad..d9a1427c269f 100644
--- a/science/py-hoomd-blue/Makefile
+++ b/science/py-hoomd-blue/Makefile
@@ -1,6 +1,6 @@
 PORTNAME=	hoomd-blue
 DISTVERSIONPREFIX=	v
-DISTVERSION=	3.0.0-beta.14
+DISTVERSION=	3.0.0
 CATEGORIES=	science # physics
 PKGNAMEPREFIX=	${PYTHON_PKGNAMEPREFIX}
 
@@ -21,12 +21,12 @@ GH_TUPLE=	glotzerlab:upp11:0c1fb8dfb4bcdc1c5c4eff9165539b15e70c4360:glotzerlab_u
 		glotzerlab:nano-signal-slot:34223a4a7e97f8e114ef007e5360cf7a71265da3:glotzerlab_nano_signal_slot/hoomd/extern/nano-signal-slot \
 		glotzerlab:cub:c3cceac115c072fb63df1836ff46d8c60d9eb304:glotzerlab_cub/hoomd/extern/cub \
 		glotzerlab:quickhull:a706b5ba0d863b241668038be9eef67afbfaabac:glotzerlab_quickhull/hoomd/extern/quickhull \
-		glotzerlab:random123:7f2371b8c597a486cd33fb421a196d78efe08043:glotzerlab_random123/hoomd/extern/random123 \
+		glotzerlab:random123:7f462cfab3a0f5b06814e7bbcb1cedb3747618b6:glotzerlab_random123/hoomd/extern/random123 \
 		glotzerlab:HIP:849fb35f674c12f7c534153e2656b27997641866:glotzerlab_HIP/hoomd/extern/HIP \
 		glotzerlab:hipCUB:c70e19332a8402049b3359b409e50220a759c42d:glotzerlab_hipCUB/hoomd/extern/hipCUB \
 		mphowardlab:neighbor:ba0f06869b766066a7068852fa3b8c5fa746f71f:mphowardlab_neighbor/hoomd/extern/neighbor \
 		mphowardlab:hipper:b6da049a516ada03e4e1b66ca6b4c2c7c9668595:mphowardlab_hipper/hoomd/extern/hipper \
-		glotzerlab:hoomd-examples:78174286427a2ec1c23e84015f7b4ba4f5f86d20:glotzerlab_hoomd_examples/sphinx-doc/tutorial
+		glotzerlab:hoomd-examples:78174286427a2ec1c23e84015f7b4ba4f5f86d20:glotzerlab_hoomd_examples/sphinx-doc/tutorial \
 
 SHEBANG_GLOB=	*.sh
 
diff --git a/science/py-hoomd-blue/distinfo b/science/py-hoomd-blue/distinfo
index c7ccc2f964f1..e117e57141b7 100644
--- a/science/py-hoomd-blue/distinfo
+++ b/science/py-hoomd-blue/distinfo
@@ -1,6 +1,6 @@
-TIMESTAMP = 1645400314
-SHA256 (glotzerlab-hoomd-blue-v3.0.0-beta.14_GH0.tar.gz) = 1af1716bbd1ac0e23f8c4f684254dadc3e28017405902e0e1fb85e6792a20f53
-SIZE (glotzerlab-hoomd-blue-v3.0.0-beta.14_GH0.tar.gz) = 2480582
+TIMESTAMP = 1648134754
+SHA256 (glotzerlab-hoomd-blue-v3.0.0_GH0.tar.gz) = d119d8d549640866801e669c352f53e154eed7fc906f84378e3fd46e4d422d32
+SIZE (glotzerlab-hoomd-blue-v3.0.0_GH0.tar.gz) = 2755211
 SHA256 (glotzerlab-upp11-0c1fb8dfb4bcdc1c5c4eff9165539b15e70c4360_GH0.tar.gz) = 759695139bddae1d8a7cd52c967b856d6debf28fb37ea177f78c4434e2b210a8
 SIZE (glotzerlab-upp11-0c1fb8dfb4bcdc1c5c4eff9165539b15e70c4360_GH0.tar.gz) = 21058
 SHA256 (glotzerlab-nano-signal-slot-34223a4a7e97f8e114ef007e5360cf7a71265da3_GH0.tar.gz) = d15030482c82d9e4a99c2f67d8ef23b33cc318dd48ac0f8e804c6d4750f27ff4
@@ -9,8 +9,8 @@ SHA256 (glotzerlab-cub-c3cceac115c072fb63df1836ff46d8c60d9eb304_GH0.tar.gz) = ec
 SIZE (glotzerlab-cub-c3cceac115c072fb63df1836ff46d8c60d9eb304_GH0.tar.gz) = 385598
 SHA256 (glotzerlab-quickhull-a706b5ba0d863b241668038be9eef67afbfaabac_GH0.tar.gz) = 5596540c3c8ecc7bd4c849ae6ad0d755f6435582d181dddad510c771df8db370
 SIZE (glotzerlab-quickhull-a706b5ba0d863b241668038be9eef67afbfaabac_GH0.tar.gz) = 15850
-SHA256 (glotzerlab-random123-7f2371b8c597a486cd33fb421a196d78efe08043_GH0.tar.gz) = c96b9240953197387977244858d624c81bef15d74c5badd77a07c8d29cb30a8e
-SIZE (glotzerlab-random123-7f2371b8c597a486cd33fb421a196d78efe08043_GH0.tar.gz) = 648611
+SHA256 (glotzerlab-random123-7f462cfab3a0f5b06814e7bbcb1cedb3747618b6_GH0.tar.gz) = cf1f02844fce17d44a153875be73ee0a7052878d304f644155df2960f65332db
+SIZE (glotzerlab-random123-7f462cfab3a0f5b06814e7bbcb1cedb3747618b6_GH0.tar.gz) = 318774
 SHA256 (glotzerlab-HIP-849fb35f674c12f7c534153e2656b27997641866_GH0.tar.gz) = 14b0f3bd698029ce34d0b7c14ed2ed3a3d0551c9f8660cdd84a25297615c8bf5
 SIZE (glotzerlab-HIP-849fb35f674c12f7c534153e2656b27997641866_GH0.tar.gz) = 898907
 SHA256 (glotzerlab-hipCUB-c70e19332a8402049b3359b409e50220a759c42d_GH0.tar.gz) = f3dbd921ea8c5fe9068d6d9e6e9112c11c7e18488169ce48423d9fdb014536c6
diff --git a/science/py-hoomd-blue/pkg-plist b/science/py-hoomd-blue/pkg-plist
index 7e6788ee92dc..00526ba8dc66 100644
--- a/science/py-hoomd-blue/pkg-plist
+++ b/science/py-hoomd-blue/pkg-plist
@@ -53,12 +53,16 @@ lib/cmake/hoomd/hoomd-targets.cmake
 %%PYTHON_SITELIBDIR%%/hoomd/hpmc/external/user.py
 %%PYTHON_SITELIBDIR%%/hoomd/hpmc/external/wall.py
 %%PYTHON_SITELIBDIR%%/hoomd/hpmc/integrate.py
+%%PYTHON_SITELIBDIR%%/hoomd/hpmc/nec/__init__.py
+%%PYTHON_SITELIBDIR%%/hoomd/hpmc/nec/integrate.py
+%%PYTHON_SITELIBDIR%%/hoomd/hpmc/nec/tune.py
 %%PYTHON_SITELIBDIR%%/hoomd/hpmc/pair/__init__.py
 %%PYTHON_SITELIBDIR%%/hoomd/hpmc/pair/user.py
 %%PYTHON_SITELIBDIR%%/hoomd/hpmc/pytest/__init__.py
 %%PYTHON_SITELIBDIR%%/hoomd/hpmc/pytest/conftest.py
 %%PYTHON_SITELIBDIR%%/hoomd/hpmc/pytest/depletants_sphere.py
 %%PYTHON_SITELIBDIR%%/hoomd/hpmc/pytest/test_boxmc.py
+%%PYTHON_SITELIBDIR%%/hoomd/hpmc/pytest/test_boxmc_move_tuner.py
 %%PYTHON_SITELIBDIR%%/hoomd/hpmc/pytest/test_clusters.py
 %%PYTHON_SITELIBDIR%%/hoomd/hpmc/pytest/test_compute_free_volume.py
 %%PYTHON_SITELIBDIR%%/hoomd/hpmc/pytest/test_compute_sdf.py
@@ -67,6 +71,7 @@ lib/cmake/hoomd/hoomd-targets.cmake
 %%PYTHON_SITELIBDIR%%/hoomd/hpmc/pytest/test_external_wall.py
 %%PYTHON_SITELIBDIR%%/hoomd/hpmc/pytest/test_move_size_tuner.py
 %%PYTHON_SITELIBDIR%%/hoomd/hpmc/pytest/test_muvt.py
+%%PYTHON_SITELIBDIR%%/hoomd/hpmc/pytest/test_nec.py
 %%PYTHON_SITELIBDIR%%/hoomd/hpmc/pytest/test_pair_union_user.py
 %%PYTHON_SITELIBDIR%%/hoomd/hpmc/pytest/test_pair_user.py
 %%PYTHON_SITELIBDIR%%/hoomd/hpmc/pytest/test_quick_compress.py
@@ -75,6 +80,8 @@ lib/cmake/hoomd/hoomd-targets.cmake
 %%PYTHON_SITELIBDIR%%/hoomd/hpmc/pytest/test_small_box_2d.py
 %%PYTHON_SITELIBDIR%%/hoomd/hpmc/pytest/test_small_box_3d.py
 %%PYTHON_SITELIBDIR%%/hoomd/hpmc/tune/__init__.py
+%%PYTHON_SITELIBDIR%%/hoomd/hpmc/tune/boxmc_move_size.py
+%%PYTHON_SITELIBDIR%%/hoomd/hpmc/tune/mc_move_tune.py
 %%PYTHON_SITELIBDIR%%/hoomd/hpmc/tune/move_size.py
 %%PYTHON_SITELIBDIR%%/hoomd/hpmc/update.py
 %%PYTHON_SITELIBDIR%%/hoomd/include/HOOMDVersion.h
@@ -121,7 +128,6 @@ lib/cmake/hoomd/hoomd-targets.cmake
 %%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/Initializers.h
 %%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/Integrator.cuh
 %%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/Integrator.h
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/IntegratorData.h
 %%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/LoadBalancer.h
 %%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/LoadBalancerGPU.cuh
 %%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/LoadBalancerGPU.h
@@ -388,7 +394,7 @@ lib/cmake/hoomd/hoomd-targets.cmake
 %%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/dfftlib/src/dfft_cuda.cuh
 %%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/dfftlib/src/dfft_cuda.h
 %%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/dfftlib/src/dfft_host.h
-%%MPI%%%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/dfftlib/src/dfft_lib_config.h
+%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/dfftlib/src/dfft_lib_config.h
 %%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/dfftlib/src/dfft_local_fft_config.h
 %%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/dfftlib/src/mkl_single_interface.h
 %%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/gsd.h
@@ -492,39 +498,22 @@ lib/cmake/hoomd/hoomd-targets.cmake
 %%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/quickhull/Structs/VertexDataSource.hpp
 %%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/quickhull/Tests/QuickHullTests.hpp
 %%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/quickhull/Types.hpp
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/random123/examples/boxmuller.hpp
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/random123/examples/kat.h
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/random123/examples/kat_dev_execute.h
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/random123/examples/kat_main.h
+%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/random123/examples/example_seeds.h
 %%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/random123/examples/pi_check.h
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/random123/examples/rngNxW.h
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/random123/examples/time_initkeyctr.h
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/random123/examples/time_misc.h
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/random123/examples/time_random123.h
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/random123/examples/u01fixedpt.h
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/random123/examples/ua.hpp
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/random123/examples/uniform.hpp
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/random123/examples/ut_uniform_IEEEkatvectors.hpp
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/random123/examples/ut_uniform_reference.hpp
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/random123/examples/util.h
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/random123/examples/util_cpu.h
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/random123/examples/util_cuda.h
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/random123/examples/util_demangle.hpp
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/random123/examples/util_expandtpl.h
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/random123/examples/util_m128.h
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/random123/examples/util_opencl.h
-%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/random123/examples/util_print.h
 %%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/random123/include/Random123/MicroURNG.hpp
 %%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/random123/include/Random123/ReinterpretCtr.hpp
 %%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/random123/include/Random123/aes.h
 %%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/random123/include/Random123/array.h
 %%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/random123/include/Random123/ars.h
+%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/random123/include/Random123/boxmuller.hpp
 %%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/random123/include/Random123/conventional/Engine.hpp
 %%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/random123/include/Random123/conventional/gsl_cbrng.h
 %%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/random123/include/Random123/features/clangfeatures.h
 %%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/random123/include/Random123/features/compilerfeatures.h
+%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/random123/include/Random123/features/fujitsufeatures.h
 %%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/random123/include/Random123/features/gccfeatures.h
 %%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/random123/include/Random123/features/iccfeatures.h
+%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/random123/include/Random123/features/metalfeatures.h
 %%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/random123/include/Random123/features/msvcfeatures.h
 %%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/random123/include/Random123/features/nvccfeatures.h
 %%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/random123/include/Random123/features/open64features.h
@@ -536,6 +525,25 @@ lib/cmake/hoomd/hoomd-targets.cmake
 %%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/random123/include/Random123/gsl_microrng.h
 %%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/random123/include/Random123/philox.h
 %%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/random123/include/Random123/threefry.h
+%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/random123/include/Random123/u01fixedpt.h
+%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/random123/include/Random123/uniform.hpp
+%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/random123/tests/kat.h
+%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/random123/tests/kat_dev_execute.h
+%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/random123/tests/kat_main.h
+%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/random123/tests/rngNxW.h
+%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/random123/tests/time_initkeyctr.h
+%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/random123/tests/time_misc.h
+%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/random123/tests/time_random123.h
+%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/random123/tests/ut_uniform_IEEEkatvectors.hpp
+%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/random123/tests/ut_uniform_reference.hpp
+%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/random123/tests/util.h
+%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/random123/tests/util_cuda.h
+%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/random123/tests/util_demangle.hpp
+%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/random123/tests/util_expandtpl.h
+%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/random123/tests/util_m128.h
+%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/random123/tests/util_metal.h
+%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/random123/tests/util_opencl.h
+%%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/random123/tests/util_print.h
 %%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/triangle_triangle.h
 %%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/upp11/upp11.h
 %%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/extern/vmdsock.h
@@ -775,7 +783,6 @@ lib/cmake/hoomd/hoomd-targets.cmake
 %%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/mpcd/SystemData.h
 %%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/mpcd/SystemDataSnapshot.h
 %%PYTHON_SITELIBDIR%%/hoomd/include/hoomd/mpcd/VirtualParticleFiller.h
-%%PYTHON_SITELIBDIR%%/hoomd/integrate.py
 %%PYTHON_SITELIBDIR%%/hoomd/libquickhull.so
 %%PYTHON_SITELIBDIR%%/hoomd/logging.py
 %%PYTHON_SITELIBDIR%%/hoomd/md/__init__.py
@@ -890,7 +897,6 @@ lib/cmake/hoomd/hoomd-targets.cmake
 %%PYTHON_SITELIBDIR%%/hoomd/pytest/test_syncedlist.py
 %%PYTHON_SITELIBDIR%%/hoomd/pytest/test_table.py
 %%PYTHON_SITELIBDIR%%/hoomd/pytest/test_trigger.py
-%%PYTHON_SITELIBDIR%%/hoomd/pytest/test_triggeredops.py
 %%PYTHON_SITELIBDIR%%/hoomd/pytest/test_type_parameter_dict.py
 %%PYTHON_SITELIBDIR%%/hoomd/pytest/test_typeparam.py
 %%PYTHON_SITELIBDIR%%/hoomd/pytest/test_variant.py